LOCUS       NM_001395612            2940 bp    mRNA    linear   ROD 22-SEP-2024
DEFINITION  Rattus norvegicus family with sequence similarity 185, member A
            (Fam185a), transcript variant 1, mRNA.
ACCESSION   NM_001395612 XM_039108073
VERSION     NM_001395612.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2940)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
REFERENCE   2  (bases 1 to 2940)
  AUTHORS   Florea,L., Di Francesco,V., Miller,J., Turner,R., Yao,A.,
            Harris,M., Walenz,B., Mobarry,C., Merkulov,G.V., Charlab,R.,
            Dew,I., Deng,Z., Istrail,S., Li,P. and Sutton,G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000004.1.
            
            On Jul 22, 2021 this sequence version replaced XM_039108073.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643293.21450.1,
                                           SRR26643288.17522.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-660               JAXUCZ010000004.1  14554508-14555167   c
            661-770             JAXUCZ010000004.1  14551648-14551757   c
            771-863             JAXUCZ010000004.1  14541142-14541234   c
            864-1002            JAXUCZ010000004.1  14536369-14536507   c
            1003-1044           JAXUCZ010000004.1  14528818-14528859   c
            1045-1140           JAXUCZ010000004.1  14521975-14522070   c
            1141-1275           JAXUCZ010000004.1  14512678-14512812   c
            1276-2940           JAXUCZ010000004.1  14499869-14501533   c
FEATURES             Location/Qualifiers
     source          1..2940
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q11"
     gene            1..2940
                     /gene="Fam185a"
                     /gene_synonym="RGD1562135"
                     /note="family with sequence similarity 185, member A"
                     /db_xref="GeneID:499979"
                     /db_xref="RGD:1562135"
     exon            1..660
                     /gene="Fam185a"
                     /gene_synonym="RGD1562135"
                     /inference="alignment:Splign:2.1.0"
     CDS             252..1388
                     /gene="Fam185a"
                     /gene_synonym="RGD1562135"
                     /codon_start=1
                     /product="protein FAM185A"
                     /protein_id="NP_001382541.1"
                     /db_xref="GeneID:499979"
                     /db_xref="RGD:1562135"
                     /translation="MFGRLPPCASRVRAGALFGALGTRTCGSGGAERRGSVPANPGAG
                     LARGDLREWTLRVSPFGRLRARLPCHLSVRPLDPLAHPDGDRVLVAVSGVGSGTRGLD
                     SLQVKYDAALQEMAILSDDIDPEASVEVNAPVKFDLNIESSGAGSVSVQNIECDSCKI
                     DTEQGTSILQSVKSQKLHVNTKGGDVVCLGTIYGNIDIHASDKSTVTIDKLQGSCVNI
                     STEDGLLQAKYLYTDSSFVSSAAGDIALGNIHGNIVLESKMGNISVDSSCGCLKASSD
                     QGAIDVYISQLGEVVLTSQEGSIAVKAPSSLRAHLKLSGKEVVVDTEAHVQEMAKDRK
                     GDGMTVTGLMNQGSKCERWINAIAPKGTVRFQHQSWFQSLKLPN"
     exon            661..770
                     /gene="Fam185a"
                     /gene_synonym="RGD1562135"
                     /inference="alignment:Splign:2.1.0"
     exon            771..863
                     /gene="Fam185a"
                     /gene_synonym="RGD1562135"
                     /inference="alignment:Splign:2.1.0"
     exon            864..1002
                     /gene="Fam185a"
                     /gene_synonym="RGD1562135"
                     /inference="alignment:Splign:2.1.0"
     exon            1003..1044
                     /gene="Fam185a"
                     /gene_synonym="RGD1562135"
                     /inference="alignment:Splign:2.1.0"
     exon            1045..1140
                     /gene="Fam185a"
                     /gene_synonym="RGD1562135"
                     /inference="alignment:Splign:2.1.0"
     exon            1141..1275
                     /gene="Fam185a"
                     /gene_synonym="RGD1562135"
                     /inference="alignment:Splign:2.1.0"
     exon            1276..2940
                     /gene="Fam185a"
                     /gene_synonym="RGD1562135"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctccgccaaa ggggcggaaa taggtggcta gtcagggtca gggcttcaac aggacgcttt
       61 gacgttttaa ttttcctacc ggcatcgttt tgaggctgag atttaagtcg ttaagtgctg
      121 tgctgggact tggctcgttc ttcctcagcg gaaccgtgct tacggtcgcc tttctgactg
      181 gcccgaggca gctcgtgttt cgggctgtct caggacccgc gagccgaggc tgaagggttc
      241 cgagggagag catgttcggc cgcctccctc cttgcgcgtc ccgggtgcgg gcgggcgcct
      301 tgttcggagc tctggggacc cggacatgcg gctccggtgg ggccgagcgg cggggctcgg
      361 tgcccgcgaa ccctggggcc ggcctggcac gcggggatct gagggagtgg acgctgaggg
      421 tgagcccgtt tgggcggctg agggcgcggc tcccatgcca cctgtccgtg aggcccctgg
      481 atcccctcgc gcacccggac ggcgaccgcg tgctagtggc ggtgagcggc gtggggagcg
      541 ggacgcgtgg cctagacagc ctgcaggtca agtatgacgc tgctctgcag gagatggcca
      601 ttctgtcaga cgacattgat cccgaggcgt cggtggaggt gaacgcaccc gtcaaatttg
      661 atttaaatat cgagtcatca ggggctggct ctgtgagcgt gcagaatatt gagtgcgata
      721 gctgtaaaat tgacactgag caggggacca gcatcttgca gtctgtgaag agtcaaaagt
      781 tacatgtgaa cacaaaagga ggtgatgtgg tctgtcttgg aacaatttac ggaaatatag
      841 acatccacgc gtcagataaa agtactgtga ccatagataa acttcaggga agttgtgtta
      901 atatctctac ggaggatggt ttgcttcaag ccaagtatct gtatacagac tcttcatttg
      961 tgtcttctgc cgctggagac attgcattag gaaatattca tggaaatatc gtgttagaaa
     1021 gcaagatggg taacatttca gtggattcgt cctgtggatg tctaaaagcc tccagtgatc
     1081 agggtgccat cgatgtgtac atcagtcagc taggggaagt ggtgctcacc tcgcaggaag
     1141 gttccattgc tgtcaaggcc ccatcttctc tacgagctca tttaaaactg tcggggaaag
     1201 aggtggttgt ggacacagag gctcatgttc aggagatggc caaagatcgt aaaggggatg
     1261 gtatgacagt tacaggactc atgaatcaag gaagcaagtg tgagagatgg ataaatgcca
     1321 ttgcccccaa aggcactgtc cgctttcaac accagagctg gttccagtcc ctgaaactgc
     1381 caaactgaga gtgcttttgg ggtgtttgct gtttgaagtg gacaacaagc caatgccagt
     1441 gtccctatag ccgtgagaaa caacagcgct gcagcattac cagagaggac cggtgaatgg
     1501 tctcaggtag cttctgccag atgtgtactt aattctgctg tccactctcc attgttctgt
     1561 cccaagatac gcgccttaag acctccagtg acacccaaac cacagtgtac agtaccaacc
     1621 ctggatactg cgggcttctt ttacttttca tataaacaca tgtgacagct gaatgccttt
     1681 tctatacgac tgagcagttc tttactctgg ccaaagccct taccatttta gttccaatat
     1741 caaaacatgg atgtctttct ttatcttctt tacaagttca tgtgttcacc ctgactgtag
     1801 ggcctagcag cctcagcaga tgggattggg gtattttgtt tttgttttgt ttttgtcttg
     1861 cttactaagt ttgagaactt ttaccatttt cctaaagtac ttgctttagt gccatttcta
     1921 agataaggac ttcttgaacc ctggtactgc atggctactg caacagttgg atggcctcag
     1981 tagttactga gtgactaaca gactgtgcac acacagcatg cacatgctgg gcaaagaatg
     2041 ccttacagcc caaatgcaac agcctaaggt tttctcatac tacttcacag gacacacaac
     2101 ttaaaactta ctgaagaaat aaaaagcaga accttggatg gggcaagttc taccacacat
     2161 ttaataactt cagatagcac attgctcacc tgattgtagt gggtgatgct gcgggcctgc
     2221 tcattgtatc acgtggctgg aataagtgtt gtccaggctg aggatattct ctgagggctg
     2281 tgtggagaaa tcttccaagt tcattcatgt aacaggaaac atcgaatttc ttatacctgg
     2341 atgatatcat tccattctca tcctctaaag acaaccctat gtccacctcc ttccttgtac
     2401 ggtccctctg caggcaaagc acagagtcgt cctctgacgc tctgaatgtc tgacttgtaa
     2461 gctgtaaaaa tctctgttgg ccaagatatt taacatgttt atgagaatat cccattgtat
     2521 tcacagctcc tacttgagat ggtcatgaaa aggtggtggt cattggagcc accttagaat
     2581 tctgggtatt gtaaccccca cgtgacaggt ttcctctcag tgtgtccctc ctgtggcacc
     2641 cctgtcttcg gcttgtggtt aaacccttct gtaggtagag cacttgccac tggttttagt
     2701 gcagctccgt ggttacaatg ggaagaatca ttactctgtg ggctgtagag tgaaaatgca
     2761 gtgcccttgg acaaaggtgc tttacagact cacttcatgg agtctgtttc tttagaaatg
     2821 tcaactgtaa cgggaaaaac tgtgctgtat tgagcagacc agttggttgg gttgtgtatt
     2881 ttgatttaga taaatcaatg attaaacact gatattaaat aaacttttct aaatgttata
//
