LOCUS       NM_001399024            3460 bp    mRNA    linear   ROD 27-MAR-2024
DEFINITION  Rattus norvegicus family with sequence similarity 177, member A1
            (Fam177a1), mRNA.
ACCESSION   NM_001399024 XM_002729624
VERSION     NM_001399024.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000006.1.
            
            On Dec 29, 2021 this sequence version replaced XM_002729624.6.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643287.16002.1,
                                           SRR26643284.8892.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            CDS uses downstream in-frame AUG :: upstream AUG and CDS extension
                                                is not conserved
            RefSeq Select criteria           :: based on single protein-coding
                                                transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-232               JAXUCZ010000006.1  78367780-78368011
            233-406             JAXUCZ010000006.1  78371752-78371925
            407-473             JAXUCZ010000006.1  78376711-78376777
            474-571             JAXUCZ010000006.1  78378256-78378353
            572-3460            JAXUCZ010000006.1  78379815-78382703
FEATURES             Location/Qualifiers
     source          1..3460
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q23"
     gene            1..3460
                     /gene="Fam177a1"
                     /note="family with sequence similarity 177, member A1"
                     /db_xref="GeneID:100359558"
                     /db_xref="RGD:2323636"
     exon            1..232
                     /gene="Fam177a1"
                     /inference="alignment:Splign:2.1.0"
     CDS             152..778
                     /gene="Fam177a1"
                     /codon_start=1
                     /product="protein FAM177A1"
                     /protein_id="NP_001385953.1"
                     /db_xref="GeneID:100359558"
                     /db_xref="RGD:2323636"
                     /translation="MDRESGCAATGETEAAAAAAFGDTTRQLSNERGFENVELGVMGK
                     KKKVPRRVIHFVSGETMEEYSTDEDEVDGLDKKDVLPTVDPTKLPWGPYFWFYMLRAA
                     TSTLSVCDFLGEKIASVLGISTPKYQYAIDEYYRMKKEEEEEEEENRMSEEAERQYQQ
                     NKQQADSMVQTDQPETVVSSSFVNINFEMEEDCEAIKENKQHPVSVPP"
     exon            233..406
                     /gene="Fam177a1"
                     /inference="alignment:Splign:2.1.0"
     exon            407..473
                     /gene="Fam177a1"
                     /inference="alignment:Splign:2.1.0"
     exon            474..571
                     /gene="Fam177a1"
                     /inference="alignment:Splign:2.1.0"
     exon            572..3460
                     /gene="Fam177a1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcccgcgatc taggctcgtc ttcgctggga gggtggactg ggtgctgcag ccccagaggc
       61 ctgggcgatc cggtaggatc cttcgtgcgg gcggtgggga acgttcttcg gactaacctc
      121 tgtgtcgccg ctgcccgggc cggcgctaat gatggaccgg gagtcgggat gcgcggcgac
      181 gggagaaacc gaggcagcgg ccgccgcggc gttcggagac acaacacgac agctgagtaa
      241 cgaaagaggc tttgagaatg tagaactggg agtcatgggg aaaaagaaga aagtcccaag
      301 gagggtcatc cacttcgtca gcggagagac catggaggag tacagcaccg atgaggatga
      361 ggtcgacggc ctggacaaga aagatgtgct gcccactgtc gacccgacaa aacttccctg
      421 gggcccctac ttctggtttt acatgctgcg ggccgccaca tcaaccctct cagtgtgtga
      481 ctttcttgga gagaagattg cttcagtttt gggcatcagc accccaaaat accagtatgc
      541 cattgatgag tattaccgga tgaagaagga ggaagaggag gaagaagaag aaaacaggat
      601 gtcagaggaa gcagaaagac aataccaaca aaacaagcag caggctgatt ccatggtaca
      661 gacagatcaa ccagagacag tagtgtccag ttcatttgtg aacattaatt ttgagatgga
      721 ggaagactgc gaagcaatta aggaaaacaa acaacatcca gtctctgtcc caccatagga
      781 cgaaatgact gtacataaag tgttaaaccc taaactccaa tcaggaactt tttatgtttt
      841 tagtgggacg taaaccaact atttatattt taaattatga agggtatgaa gggtaaatct
      901 gtcttcattc ttatgctgca tctgttacag tcagatctga cgttgggatg tttttgagtt
      961 aaactagtga cccccccttc cctacccctc catactgagg agcaaaccca gggcttcttt
     1021 catatacact caatagccta gcgctctatc atcggcccag tgcattgtgt tttaagacca
     1081 tcttttataa aacacgagga cgtttagcca agcatggtga cacagccgtt agccgcagca
     1141 ctcgggaggc agaggcagag ggtctccgtg agtttgccag cctggtctac actgtgagct
     1201 ccagcccagc cgcatggtga cacctggtct aacaacagca aaaattgaag gcgtcctaca
     1261 ttcagacgag agttaaataa ttcactaaga tttttggctt gggggcattt gttttttaaa
     1321 ggttaagtat tgattaatca ttaataatta acagactcag tataaagtgc ccctagattt
     1381 tatacgagga gggctcagaa tgtgtaatga aaggagcaag atgggagcat gggctccctt
     1441 tcgttgggaa tgttatatgg aaagattggg tcttcatgct ctcagtaagc catccctgtg
     1501 tttttcagta gtcattgaac ggatatgctc tgatcacaaa tcaacactag ttactgagtg
     1561 ggtctgtagt tgtagtcacg cgttgacacc ttgtcattac ccacatggca tcttggacgt
     1621 gtcagttact cagcctctat ggatcacagg cagagtaacc aacaggcgta agcaatggag
     1681 aacagtttat tcaccatttt gaagtagcag tcctaagtca gacagctgat gtgatggttt
     1741 ggccatctct ctccttacta gattattcct ttacaaatta tatatgaacc tacttttaag
     1801 aaatattcct gaatatgtgt tcggaacctt gtatctgtag aactctgatt tatagccaaa
     1861 agtagataaa gaaaaatgtg ggcagtgttg tagaaatcct catcattcaa gccttctcat
     1921 ggcttgaaaa ggctttagaa atgagtggtt ataaaccgtg accctctcca tcttaaatgt
     1981 gcacttagac acggctaagc gaacacactg tagagacctg ccagagggcc tcagcaaatt
     2041 cacctcaaag gtgactttct gactgaataa aagtttcagt tgggctgaca tttgtaaggc
     2101 tcagcaagta tggagtcgtc ctgagttagg agctgataag cacctttgtg tgtataaaca
     2161 tgggacttag tccttaggat ttatctttcc actgtgtgat taatgtcact ctcagttaca
     2221 gtttactaac actctgcctc agttgatagc tgctaaaata tgttggcctg acttcctgct
     2281 cttgactggt ttttaacttc tgagacagag ctgccacaca gacactcggt tatgaggtga
     2341 aggtggtcta cagttgactg aggccttctc ccctgaaggt cagcatctca gagctatgct
     2401 caggcctgtg atcactgcaa gagggtggca ccctgcacgg cctgagcttc ctgcattgac
     2461 ctttttgctg cttgtttggc actggctggt gagtggttta gttttttcac tgtgccttac
     2521 atttttatac tttggtttat gcaagctata aaaattaacg agttaatcat tgttttattt
     2581 taagcctccc tcacctcttc ctattcctta gaattattct taataattcc ctagaagaat
     2641 tattttttcc tctggatcac agttcatgac atcctatttt cttctgatct cactttttat
     2701 aaacactgac cacagccagg agtggtagtg tacttctgta ctcccagcac tagggaggct
     2761 gaggcaggag gatcatgagt tggaggctgg cctagactac atatcaagac ccttaacaac
     2821 aaacaaaaag acataaatac atgagttagt atgctgaatt agtaaattct ctagcaaaac
     2881 ctttaacaaa gttaattttg taaatggtta ataaacctag acaaaatctc atacaatctg
     2941 atgagtttaa tgaaacaaaa tatttgtttg aatactttct ttggaaatac catatttaaa
     3001 aaaactttgg agggcaagac aactctgggt acaagtgctt gatgggaagc ctgagaacct
     3061 gaatttgatc tccagaaccc atgcagggaa aggaaagaat cacaatgtct actgacctcc
     3121 atgtgtgctc tggtatacac acacaagaaa tacatcaaaa tttaaaaaaa taataaaagg
     3181 catagtggca ctcaccttta acctcagcac ttgggaggca gaggcagatg tctcttttta
     3241 agttcaagat taaaggccaa ctgggtccac atagcaagtt ccaggccagt cagggctaca
     3301 cagtgagacc atgtctcaaa acaaacaaac caaaacaaca aaagtcacat caaaagcttc
     3361 tgaatccaga aatgaggtgg tgctactctg atgagaagtc taccgtccca atgtttgaag
     3421 gaacagtgta atgctaaacg aataaactca acggctaact
//
