LOCUS       XM_575160               5652 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus family with sequence similarity 171,
            member B (Fam171b), transcript variant X1, mRNA.
ACCESSION   XM_575160
VERSION     XM_575160.8
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_575160.9.
            
            On Jan 21, 2021 this sequence version replaced XM_575160.7.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5652
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5652
                     /gene="Fam171b"
                     /note="family with sequence similarity 171, member B;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 50 ESTs, 3 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 56 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:499821"
                     /db_xref="RGD:1562526"
     CDS             177..2648
                     /gene="Fam171b"
                     /codon_start=1
                     /product="protein FAM171B isoform X1"
                     /protein_id="XP_575160.2"
                     /db_xref="GeneID:499821"
                     /db_xref="RGD:1562526"
                     /translation="MARLCRRVSCALLLGLAAVLLKARLVPAAARAELSRSDLSLIQQ
                     QQQQQQQEQRQREEAEEERMEVAGASFTLVVPVSVFMLKVQVNDIISRQYLSQAVVEV
                     FVNYTKTNSTVTRSNGAVLIKVPYRLGLSLTIIAYKDGYVLTPLPWKTGRMPIYSSVT
                     LSLFPQSQANIWLFEDTVLITGKLTDAKSQPSVQFSKASIKLPDNHHISNVTGYLTVL
                     QQFLKGDNFLSAIGITYSTGFENVELTPHAAICVKIYSGGKELNVAGPIHISLPLLHT
                     SNVNVGDRIPAWTFNMKIGAWVHHDWGTVKEHNGHLIWTYDAPHLGYWIAAPSPSTLD
                     LGINEDFPNVIGYHTAFLTAILGGTIVIIIVCLAALLCYCREKYGTPQKRERNITKLE
                     ILKRDQTTSTTHINHISSVKVALKAEDKPQLFNAKTSSYSPQKKETTKTETEERIPMV
                     KTRDNFKIYNEDVSFLSVNHNNYSRNPTQSLEPSIGSKQPKHMNNNLSPSLGDAQEEK
                     RYLTGNDEVYGRSHLPEQLMHIYSQPIAILQTSDLFSMPDQLHAAKSATLPRKGQLVY
                     GQLMEPVNRENFTQTLPKMPMHSHTQDPDAREEDIVLEGQQSLPSQTSDWSRYSNSLL
                     ESVSVPGTLNEAVVMTPFSSELQGISEQTLLELSKGKPSPHPRAWFVSLDGKPVAQVR
                     HSFIDLKKGKRTQSNDTSLDSGVDMNEHQLSRKLEREKTFIKSMHQPKILYLEDLDLS
                     SSESGTTVCSPEDPALRHILDGGGGVIIEHPREESPGSKSTVEDFEANVSPTKKRGRP
                     LPLAKRDSKTNIWKKREERPLIPIN"
ORIGIN      
        1 atgcgaaagc gggctcgcca tcctcttgca ggcccgctcc tcctcccgcc gaggctgtgc
       61 accgcagaca gcgcgagggg gagcgagcga gcgggcgcgg ccgggatccg cagccctggc
      121 gcccgccgtc gctcgcagcc ccgcaatatg cctccgtggc tctctggctc ttcgccatgg
      181 cgaggctctg ccggcgcgtc tcttgcgccc tgctcctcgg cctggccgcg gtgctgctga
      241 aggcgcggct cgtccccgcg gccgctagag ccgaactcag ccgctccgac ctcagcctca
      301 tccagcagca acagcagcag cagcagcaag agcaaaggca gcgggaggag gcggaggagg
      361 agcggatgga ggtggctggg gcatccttta ctttggtggt tccagtgtct gtatttatgc
      421 tgaaagtcca agtaaatgac atcatcagtc gccagtacct gagtcaagcc gttgtggagg
      481 tgtttgttaa ctacaccaag acaaattcta cagtaaccag gagcaatgga gcagtattga
      541 taaaagtacc ctatcgatta ggactcagct taaccatcat tgcttacaaa gatggctacg
      601 tcttgacacc tctgccttgg aaaactggaa ggatgccaat atattcttca gttacacttt
      661 cactgttccc gcaaagccaa gcaaatatat ggctctttga agacactgtt ttgattactg
      721 gaaaattaac tgatgccaaa tctcagccaa gtgttcagtt ttcaaaagcc tccattaaac
      781 ttcctgacaa ccatcacatt agcaacgtga ccggctatct aacggttcta caacagtttt
      841 taaaggggga caattttctg tctgcgattg gaatcactta ctcaacaggt tttgaaaatg
      901 ttgagttgac tcctcacgct gcaatatgtg tgaaaatata ttccggagga aaagaattaa
      961 atgtggctgg ccccatccat atttctcttc ctctcctaca tacaagtaac gtaaatgtag
     1021 gagatcggat acctgcttgg acctttaata tgaagatagg tgcttgggtg catcatgact
     1081 gggggacagt caaggagcat aacggccatt tgatttggac ctatgatgcg ccacatttgg
     1141 gctactggat agcagctcca tccccaagca ctttagattt gggtataaat gaagatttcc
     1201 caaacgtcat tggctaccac acagcgttcc ttacagccat cctaggggga acgattgtca
     1261 tcatcattgt atgtttggct gcactgcttt gttactgcag ggagaagtat ggaacaccac
     1321 agaagagaga aaggaatatc actaagcttg agatcctcaa gagagatcag acaacatcta
     1381 caacacacat aaatcatatc agctcagtca aagttgcgtt gaaagctgag gataaaccgc
     1441 agctgtttaa tgccaaaact tcctcctaca gtccccagaa aaaggaaacc acaaagacag
     1501 agacagaaga aagaattcct atggtgaaaa ctcgggacaa ttttaaaatc tacaatgaag
     1561 atgtttcctt tctgtcagtt aatcacaata actattcacg aaacccaaca cagtctttgg
     1621 agccaagtat agggagcaaa cagcctaaac atatgaacaa caatctctct ccatcactgg
     1681 gtgatgctca ggaggaaaag aggtatctta cggggaatga tgaggtgtat gggcgttccc
     1741 accttccaga gcagctcatg cacatataca gccagcccat agccatcctt cagacgtctg
     1801 acctcttctc catgccagac cagttacatg ccgccaagtc tgccacttta ccaagaaagg
     1861 gacaattggt ctatggccaa ctgatggaac cagtgaacag agagaacttt acacaaacat
     1921 tgcccaaaat gccaatgcat tctcacacac aggacccgga tgccagagaa gaagacatcg
     1981 tacttgaagg ccagcagagc ttgccgtccc agacctcgga ttggagccga tactccaaca
     2041 gcttgttgga gtcagtgtct gttcctggaa ctctaaatga agcagttgtg atgaccccct
     2101 tttcgtcgga acttcaagga atttcagaac agaccctcct tgagctgtcc aaaggtaagc
     2161 cctctccgca tcccagggct tggtttgtgt ctctcgatgg aaagcctgtg gcccaagtga
     2221 gacactcctt tatagacctg aagaaaggca agagaaccca gagcaatgat acgagcctcg
     2281 actctggggt cgatatgaac gagcatcagt taagcaggaa gctggagagg gagaaaacgt
     2341 tcataaagag catgcatcag cccaagatcc tttacctgga agacttagac ctgagcagca
     2401 gcgagagtgg aaccactgtc tgctcccccg aggaccctgc gctgaggcac atcttggatg
     2461 gagggggcgg ggttatcatc gagcacccta gggaagagtc tccaggaagc aagagtaccg
     2521 tggaagactt tgaagccaac gtgtctccca ctaaaaaaag gggccggcca ctgccgctag
     2581 ccaaaagaga tagcaagact aacatctgga agaaacgaga ggaacgccca ctgattccca
     2641 taaactaatt gtgagagctg tgcgggaggc atgtgtctct gtcgtctcac cgtgtgtatt
     2701 cttgcttctt gtaaattgca gtgtaaacct cttaggaagc ggagactgag caaaatctca
     2761 cgggccatcg agacgcctcg agcaaagtgg atgggaaaat aatcactcga aaatcggaaa
     2821 tgtcctctct ggcctgttct ttttctttca ttgatttttt ttgggtgata aagttatcaa
     2881 aatgcaaaac aacgtgaaga tgttccctga agatgttgct cagttcgctg gttggtcctg
     2941 gctcttcaga acacagctgt ggaatgtgta gtagtcgctt tccagaatcc tgcctctgcc
     3001 ttggtcttag aaaagtaggt gttttcttca ggcctcatcc tcgtgcagtg tgactgtggt
     3061 gcccttccct gcctacgctt aaaaacaact tgataaatat ttgtatggat gctagagacc
     3121 aacagcattt tctttttttt aagattaatg gcttgtggat tgtcaccacc aaagtaaatc
     3181 ctgtgctcct ataacatggg caggaagctc cccagttcgt tagaggagga gacccgattc
     3241 tggttatttg gggatgtagg tttatagagt aaataagata ctgacttgtg tagaaatttg
     3301 agaaatgaaa actctgatat tgtctttttt ttttttattt cgaatgaagt gaccttagtt
     3361 gccagctgag aggaggtttt gagtttaagg ttcacgaatc cgtaaaggct aacattggtt
     3421 ttttgttttt tttttaaata tatttttgtt gagattctcc cccattcaaa atcaatcatt
     3481 tacaaactgt caaatttgat ttaaaatata aaaactcttc tttagaatgc cgggaaatga
     3541 acagactgtg gagacaaaaa gaaatggata ttttgtgtaa ttggacagga aaagaaagac
     3601 caattccctg atatttaaaa aaaaaaaaga tctctaggct ttgagttaca ctgctgagtg
     3661 tggacacttt ggaacgatga gagaagaaca gtctggggtt ccaggggacc tgctccccgt
     3721 ctcctgtgcc ctgcagcgtc acttgccagt gtggttagta ctgttctctc agtgtgaact
     3781 caggagctgt tttcaattat gggttctcaa ctctcctaaa cagaaaagct ctctgatacc
     3841 atcaactatc ctgtcttact tatagttttt catgaggaca catttgtaca gcagctcacc
     3901 ctcccttttt ttttggtagg aagaagtggt tcttctcacc ccctaccata taagcaattt
     3961 caagccactc aaactctgtg aaatggtaga aacttaggca atggaagtca ggagctcttc
     4021 tcctgagaca acagaccagc ccgcttttgc tataaccact tctgaaatat ctatctgtct
     4081 taactctctt ggctttctgc atttaacaaa gaatgcaaag gcctttgcct atgtttctca
     4141 tacattaccc ctctccttct atgtttgggt aacacatagg cttactactg ggggtagagt
     4201 gacacggctc actttcagag gaggcttttt attggttcca cacagaaatc gatcatacac
     4261 agcatgaaca cgaacaaaaa acaaaaagca aacaaacaaa caaacaaaga aaaaacccca
     4321 acctggagaa gtttaaggag ttagtgctct ggggaagtgc cttgtctcag acttgcgtta
     4381 ggattaataa catctttctt ccatgtacat tttgttagcc aaattaaaca gatgggcgct
     4441 taagaaatat agacctagtg tttcacgttg gaacaaggag tttttgcatg taacatttgt
     4501 gtgtgtgtgt gttgtttttc gaatccacaa gatattgata aattgcttat attggaatga
     4561 ggttaggaac tatatggtaa aatgctgcac ccgctcaaca ctttaagtat atatcctcac
     4621 ctttgaaagg gtttcatgtc tcaactgggc gatgacatac acacaaacgt gagtatatgg
     4681 tccaagtacg acagtgactt cactcattct tgtctaaggg gaagtgagat gaggtatcct
     4741 aagggctttt aaagaatttt agcttcacga aatacttaaa aaaaaaaacc cactggaatg
     4801 cggtttttga ttgggagtgt tgggcagttt atctttccta atcagaggaa tgtgacttct
     4861 cgattgcgag ctgttcacag ttcccagtaa aaagttgaag ccatctactt tttcttaacc
     4921 caagtgataa accgacagta ctcactactt tcttaaattt ttaaattgaa agccaatgca
     4981 gacttttgca tatgtaaacc agagaatttt ggttacaaat tgttgacctt tgtggatcct
     5041 ttgtacatag tttggatata tcttgaaggc aaagctatca atgaaccaat ggagtcattg
     5101 actaaagcac agctatgtgc acttttgaat acacatgacc ttgaaacttt ataaaaccca
     5161 tttttatgaa tttctgcagt tgaacaggaa tcatgccctt ttataattca cggattgtca
     5221 caaagatcac atagacggag gaataggagt tctgctttgc tctggccaat tactgtcagg
     5281 ccagtttcta tagatttgaa tcctccacca tcgatagcca tttatagggt tttagacatt
     5341 tgggggtcaa atattgtctt ttgaaacttc ccagaaaggt aaagctcaaa actccatatg
     5401 tatttctatg gcttgagtta cccttggttg tgtgtggacg tcataaagag gtctgctcag
     5461 tttttacttc agatctagag ctgatgtctt gttccaggtg tttccctttt tctttttcct
     5521 ttgtcttcct tcatcagagt gatctcacgt tttggtgtat ttattgctgt tactctattt
     5581 cttgaacagt ctgaagattt gtaaaatgtt acaaacagtt cattaaggat aataaaatca
     5641 acctaatgta ta
//
