LOCUS       NM_001126293            1330 bp    mRNA    linear   ROD 09-APR-2024
DEFINITION  Rattus norvegicus family with sequence similarity 170, member A
            (Fam170a), mRNA.
ACCESSION   NM_001126293 XM_001054549 XM_006254732 XM_574149
VERSION     NM_001126293.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1330)
  AUTHORS   Xu,F., Wang,W., Lei,C., Liu,Q., Qiu,H., Muraleedharan,V., Zhou,B.,
            Cheng,H., Huang,Z., Xu,W., Li,B. and Wang,M.
  TITLE     Activation of transcriptional activity of HSE by a novel mouse zinc
            finger protein ZNFD specifically expressed in testis
  JOURNAL   Mol Cell Biochem 363 (1-2), 409-417 (2012)
   PUBMED   22231842
REFERENCE   2  (bases 1 to 1330)
  AUTHORS   Lei,C., Liu,Q., Wang,W., Li,J., Xu,F., Liu,Y., Liu,J., Wu,S. and
            Wang,M.
  TITLE     Isolation and characterization of a novel zinc finger gene, ZNFD,
            activating AP1(PMA) transcriptional activities
  JOURNAL   Mol Cell Biochem 340 (1-2), 63-71 (2010)
   PUBMED   20162441
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000018.1.
            
            On or before Feb 8, 2022 this sequence version replaced
            XM_006254732.3, NM_001126293.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC160906.1, SRR26643293.77311.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-292               JAXUCZ010000018.1  45707817-45708108
            293-439             JAXUCZ010000018.1  45709874-45710020
            440-1201            JAXUCZ010000018.1  45710799-45711560
            1202-1330           JAXUCZ010000018.1  45712420-45712548
FEATURES             Location/Qualifiers
     source          1..1330
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /map="18q11"
     gene            1..1330
                     /gene="Fam170a"
                     /gene_synonym="RGD1565393"
                     /note="family with sequence similarity 170, member A"
                     /db_xref="GeneID:498864"
                     /db_xref="RGD:1565393"
     exon            1..292
                     /gene="Fam170a"
                     /gene_synonym="RGD1565393"
                     /inference="alignment:Splign:2.1.0"
     CDS             223..1296
                     /gene="Fam170a"
                     /gene_synonym="RGD1565393"
                     /codon_start=1
                     /product="protein FAM170A"
                     /protein_id="NP_001119765.2"
                     /db_xref="GeneID:498864"
                     /db_xref="RGD:1565393"
                     /translation="MKRRQKRKHLEIEESKEAGENSGGISKSQEDTSQPESTGAAKAQ
                     SPGVGEVSSASEYFSCVSSPHKFIHRSKGTRKLLQDSSKPRSPLDQVPEGEATIAPSQ
                     QASSSCPSYKTCVSSLCTNKEERGMKIYYMQVQMKKGVAVSWDTKETSESLEKQPRME
                     EATLPEGVWVGTPPSDVSTRNLLSDSEPIGEEKEHEEKPESDSPPGSPMVEERPRAKT
                     PDWLVTMENGFRCMACCRVFPTMESLQEHVQYGIREGFSCHVFHLTMAQLVGHVESES
                     AQEEEEEHQEAKEKPTEKKAEEQQPAEEDVGVKKPWSQCPGCVFDSPKDRRRRKDHRD
                     NSGSRQNASSVKEDEKNNAPSNT"
     exon            293..439
                     /gene="Fam170a"
                     /gene_synonym="RGD1565393"
                     /inference="alignment:Splign:2.1.0"
     exon            440..1201
                     /gene="Fam170a"
                     /gene_synonym="RGD1565393"
                     /inference="alignment:Splign:2.1.0"
     exon            1202..1330
                     /gene="Fam170a"
                     /gene_synonym="RGD1565393"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cctttgaccc ttaacagcca tgcagcgtgg tgaacactgg gcagggctgc tgtttgatta
       61 aataatctga gttcttcagc cagttaagag acttaattac ttttaatttg tgttgaatta
      121 tcgcaacgga tttcctgaag gcctaaaagg gtcagccaac ctgtagggaa aaggtgactt
      181 tggactctaa gtatcttcta agggactatt ctagctaata ccatgaaacg gcgacaaaag
      241 aggaaacatc tggaaattga agagtcaaag gaagctggtg agaattcagg aggaatttca
      301 aagtcacaag aggatacctc tcagcctgaa tccactggag cggccaaagc ccagagccca
      361 ggggtagggg aggtctcctc tgcctccgaa tacttctcct gtgtttcttc tccacacaag
      421 ttcatccatc gtagtaaggg aacccggaaa ttgctacaag acagttccaa gcctagatca
      481 ccactagatc aggtcccgga aggagaggcc actattgccc cctcacagca ggcctcctca
      541 tcctgcccat cttataagac ttgtgtatcc tctctgtgta caaacaaaga ggagaggggg
      601 atgaaaatat actacatgca ggtgcaaatg aaaaaaggtg tggccgtctc ctgggacaca
      661 aaggaaacct cagagtccct agaaaagcag ccgcggatgg aagaagccac ccttccggag
      721 ggtgtgtggg taggtactcc tccctctgac gtgtccacca gaaacctcct gtcggacagt
      781 gaacccattg gggaagagaa agaacatgag gagaaaccag agtcagacag tccaccaggg
      841 tcccccatgg ttgaagagag acccagggcc aagacacctg actggctggt gaccatggag
      901 aatggcttca ggtgcatggc ctgctgcagg gtcttcccca ccatggagag cctccaagag
      961 cacgtgcagt acgggatccg ggaaggcttc agctgccacg tcttccatct taccatggcc
     1021 cagctggtag gccatgtgga gtcagagagc gcccaggagg aggaagagga gcaccaagag
     1081 gccaaagaga agcccacgga aaagaaggct gaggagcagc agcccgcaga ggaagatgtt
     1141 ggtgtgaaga aaccctggag ccaatgccca ggctgtgtgt ttgattctcc aaaggacaga
     1201 agaagaagaa aggatcatcg agacaacagt ggcagcagac agaatgctag tagtgtaaag
     1261 gaagacgaaa agaacaacgc tccgtcgaac acataaacat ccgatgcaat aaagcttctt
     1321 ttccaaactg
//
