LOCUS       XM_006231831            5018 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus family with sequence similarity 169,
            member A (Fam169a), transcript variant X1, mRNA.
ACCESSION   XM_006231831
VERSION     XM_006231831.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006231831.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006231831.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5018
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5018
                     /gene="Fam169a"
                     /note="family with sequence similarity 169, member A;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 22 ESTs, 3 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 75 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:310013"
                     /db_xref="RGD:1590893"
     CDS             474..2474
                     /gene="Fam169a"
                     /codon_start=1
                     /product="soluble lamin-associated protein of 75 kDa
                     isoform X1"
                     /protein_id="XP_006231893.1"
                     /db_xref="GeneID:310013"
                     /db_xref="RGD:1590893"
                     /translation="MQRMAFPVDLLDNCTHEELENSAEDYLSNLRCGDPENPECFSIL
                     NFTIPVSLSNVGFVPLYGGNQTQKILALFAPEDSLTAVALYLVGQWWAIDDLVKTSEP
                     SREGLKQVSTLGERVVLYVLNRIIYRKQEMERNEIPFLCHSSTDYAKILWKKGEAIGF
                     YSVKPTGSLCASFLTQNYQLPVLDTMFIRKKYRGKDLGLHMLEDFVDSFTEDALGLRY
                     PLSSLMYTASKQYFEKYPGDHELLWEVEGVGHWHQRIPITRALQREAVNVTEISQYEA
                     KRPVSGEYGPAAVPECEPGLGERQCRELQIHSLKDAFASTSEGPEKTPVSTRTRSSHL
                     KRPKIGKRFQESEFSSSQGEDENSAQTSPMASVNKIEYAARTSESSEEVPEEEPEKRV
                     VECEDGSSDKDARPALETQPRLQKQDGDRDSALEPVNGEVTDAALKTSLAAEENDSSS
                     EGPEEEIPPLTSSGETGPPVPRAAESSKAPEATLDQTSPVTDAEMLTDEGPSNDKGHT
                     EENLSPVSKKKTILGSSDNVATLSNEEKSDGDFPNSVVAEFPEEPVSENVSPNTTSSV
                     EDQGEEGVPEAQEPSATQSSLIEVELEDVPFPQNAGQKSQSEEQSEASSEQLEQYAQS
                     AEKAVDSSSEEIEVEVPVVDRRSLRRKAKGHKGPGKKKAKMT"
ORIGIN      
        1 caggtgcgcc ggcctccatt ttgtgtgagg gaatgctgtg ctcgccctcc cggggtcgcg
       61 gcggcggcgg ctccggagcc gccccctccc acgtccccac ctggagccct ggcgccctcg
      121 ggatagcggg acccgcgcgg cgtgggggtg gggcgcgggc tcggagttgg ccgcgcagca
      181 cctcccgctc cggccgctgc cccggactag ggcattgtat ggagtcctcg ctcctctaga
      241 attcgggtca ctgccgttct ggttcaggga tctcagccgt ccatcacgcg gagagcttgg
      301 agaggcctgt gccaccggag atgggaagat ggagcgagtc cggggtggct tatggctgtg
      361 gatcacattt tactacgatt gttgtgcatg ggaaagaatg acgaaataca tggatccctt
      421 ctgggagttt acgcgggtat cttgtccaaa gtagactctg acataaccac ctgatgcaga
      481 gaatggcatt ccctgtggat ttgctggata actgcacaca tgaggaattg gaaaattctg
      541 ctgaggatta cctctccaac ttacggtgtg gggaccctga gaatccagaa tgtttctcta
      601 ttctcaactt tacgattcct gtgagcctgt caaatgtggg cttcgtacct ctctatggcg
      661 gcaatcagac ccagaagatc cttgctctct ttgcgcctga ggattcactt acagctgtgg
      721 cactttacct tgttggtcag tggtgggcca ttgatgatct tgtgaaaaca tcggaacctt
      781 ctagagaggg gctgaagcag gtgagcactc ttggagaaag agtggttctg tatgttctca
      841 atcgaattat ttatagaaaa caggaaatgg agagaaatga gatcccattc ctgtgtcata
      901 gcagtactga ctatgctaag attctgtgga agaaaggaga ggccattggg ttttactcag
      961 ttaagcctac aggaagctta tgtgcctcat ttcttaccca gaattaccaa ctgccagttc
     1021 ttgacacaat gtttataagg aagaaatacc gaggaaaaga tctggggctt catatgctgg
     1081 aggattttgt tgattcgttc acagaagatg cacttggctt acggtatcca ctgtcttctc
     1141 tcatgtacac agcttccaag caatactttg aaaagtatcc aggagatcat gaacttcttt
     1201 gggaagttga aggtgtgggt cactggcacc agcgaatacc aatcactaga gcattacaga
     1261 gagaagctgt taacgttaca gagatttctc aatatgaagc caaaagacct gtgtctggag
     1321 aatatggtcc tgctgctgta ccggagtgtg aacctggctt gggcgagcgt cagtgcagag
     1381 agctgcagat ccattcccta aaagatgcct ttgctagcac ttctgaaggt ccagaaaaga
     1441 cacctgtttc cactcgtact cggagcagtc atctaaagcg accaaagatt ggaaagcgtt
     1501 ttcaggagtc tgaatttagt agttctcaag gtgaagatga aaactctgcc cagacttcac
     1561 ctatggcttc cgtaaacaaa atagagtatg ctgcaaggac gtcagagagc tcggaggaag
     1621 tccctgagga ggagcctgag aagagagtgg ttgagtgtga ggacgggagc agtgataagg
     1681 acgcacggcc tgctctggag actcagccac gcctacagaa acaggatggg gacagggact
     1741 ctgcgttaga gcctgtgaat ggtgaggtaa cagatgctgc cctcaagact tcccttgcag
     1801 ctgaagaaaa tgactccagc agtgagggtc ctgaagaaga aattccacct ttaacttcca
     1861 gtggagagac tgggcctcct gttccacggg cagcagagtc ttcaaaagca cccgaggcta
     1921 cactagacca gacctcacct gttactgacg cagaaatgtt gactgatgaa ggcccctcta
     1981 atgataaagg tcatactgaa gaaaatctgt ccccagtttc aaaaaagaaa actattttgg
     2041 ggagctcaga caatgttgcc actctatcaa atgaagaaaa gtcagatggt gactttccaa
     2101 attctgtggt agcagaattt cctgaagaac cagtctctga gaatgtatca cccaacacta
     2161 cttcctcagt ggaagaccag ggtgaggagg gggtacctga agcccaggaa ccatcggcta
     2221 ctcagagttc tctgatagag gtagaacttg aagacgtgcc atttccacag aatgcaggac
     2281 agaagagcca gtcagaggag cagtctgaag catcttctga gcaactggaa cagtatgcac
     2341 agtcagcaga gaaagccgtg gatagcagct cagaggagat tgaagtggaa gttcctgtag
     2401 tagacaggcg cagtctgaga agaaaggcca aaggacataa gggacctggc aagaagaaag
     2461 ccaagatgac ctgaatggag gagagacgtg gttgataaat acgtttgttg ttgttgatgt
     2521 tgtttttaaa ctatggttaa ttaataaaca gcatggggca caggacaaat tttaaaattt
     2581 caatttgaac ctacagatac aggttttctt tttcttttag aacgaggatt cgccattcat
     2641 tttcattttt caggctattt tctgtaactt ttatttatga gccatgtgtc aattttggaa
     2701 atccaggtta taattttcct tcggcaagta aaacatctaa tcattaagat tttaaaaaga
     2761 caacttaaaa aaactgttag actttgatca taggaatctt ttatactact ggttttaatg
     2821 gtaaaacttg gtaaggattc ttaaagtttt atcttagtat cagaatcaat ctctgtcctt
     2881 aagtgtaggc atacctaaac aaaatgtcag ttaactaata tatcaggaga acaaaatgag
     2941 aaacttgtga tcagtggttt atgaagatga ttgtttttgt ttttacttct taatgttagt
     3001 tgtaggtgga gttcttcaag cctctgagta gcctagactt catatcatct ggtgttaata
     3061 gtactattaa agatgtaact ggtatgtggg tacataattt caaattccac ctgaagtatt
     3121 agtttgctat aattttttct atatatattt gtagatgctg aaaagcttaa gtatgctttt
     3181 atcttttaaa gacctcaagt cattgaattt agcattcagt ttaacttgga ctgtggtcct
     3241 gatcacaggt agtacagaag tataggcccc ttcctaagcc tccttaattc tactgctgtc
     3301 taactcactg tgactctcat atcaaaagac ctccatccag cttgccagta cacccttgtg
     3361 tccatttttg gataggtcta gaactctgtc cgactacctg tagagctagg tggaaggagt
     3421 aaagctgccc taggagatgt acaaatgcct acactctgat tctgctgtcc ctttgggtct
     3481 tgtgtacttt agatgtcttc agagtactgg ctgtaggcca atctgtatgt gcactttatt
     3541 gctatggcaa gagcatttga tttttttgtt ctaagatggt ttctctgtat agccttgact
     3601 gtcctgctct tgctctgtaa accaggctga cctccagctc agatctgact gcctctgcct
     3661 attgagtgtt gggattaaag gtgtgcagca ccaccacctg actgtttgat attttagaaa
     3721 tacttttaaa ttaactattt aatgacaatt gttattaaaa tgaacaaact ggttattctt
     3781 agggttcata gagaattggt cacttgggaa ataccatgtc ctttgatttg tattttagtt
     3841 agagactact ttgataccag tcagatttgt ttttgaaaca gcttgaactt ttgagatgaa
     3901 tgttgggaat ttgaatcatg aagtgctgtg agtctatgtt cagtccattc agtcttcagt
     3961 cagctgattt gatgttttta tgtttcattt attagggatg ctggtatttt agaaaagtct
     4021 aattagtcaa gatctttaag cagcagacca aatagtaaac ccttttatga agtcagatca
     4081 cttgcactta cctgttgtct tgattttgat tagctgttag gtaatttcat tctaagtgaa
     4141 aattatactg accatttttc ttagtaaatg ctaagttata aagtagatct gactaactag
     4201 tgaatttgca agcgtggatg ctgttttaca catttagaga aacttgtcaa tttacagata
     4261 gtaaccgaag ggtttgttaa gatttagaaa cttccaaatt ctgtttttca tttttaacat
     4321 ttaaaaattt cttggtacat tgttgttttg ttttttgtgg gctattgttc cccttacatt
     4381 acattcttta aatgagtgtt tttaagagat tgcactcact ggcagctcaa tgtatgaata
     4441 gtctctagag ttaaaatatt tacatatcac actgggtact agcagtataa acttacttat
     4501 acttcctaaa tgtgtttgct ataaatggga ttcaaagcag tttcaaaaca ttttgttcgg
     4561 tatacaagaa aacttgttac ttgtctgtgg cgttaaagtt tatatagagg aaagttaggt
     4621 cacaggaaaa atctttcata ttcagtaacg tttatataaa atttgtaaca aaatttatgt
     4681 tcagtaggga atgtaaacaa atgtggcttt tgcaaggcat gaggactaca gtgacgtcaa
     4741 gcagcgctct gctgagtgct cagtcatatt ctagtctcct gtgaactggt actgtttcag
     4801 tcatgattgt ggagagggaa gcacccttct agtgtatata catatatatt tccttacata
     4861 acaaagcaga tgagtattac cagaagttta gttctacttt cacttagacc acacaaaagt
     4921 ttatttaaga attttattgt aaagctcctt taaaactttt aaagagattc tattatgatt
     4981 tttttaaata aaaccaaatg gcatgactta gactgtca
//
