LOCUS       XM_039082510            6544 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus family with sequence similarity 168,
            member A (Fam168a), transcript variant X5, mRNA.
ACCESSION   XM_039082510
VERSION     XM_039082510.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039082510.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6544
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..6544
                     /gene="Fam168a"
                     /gene_synonym="RGD1308929"
                     /note="family with sequence similarity 168, member A;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 67 ESTs, 6 long SRA reads, 2 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 149 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:361614"
                     /db_xref="RGD:1308929"
     CDS             192..899
                     /gene="Fam168a"
                     /gene_synonym="RGD1308929"
                     /codon_start=1
                     /product="protein FAM168A isoform X4"
                     /protein_id="XP_038938438.1"
                     /db_xref="GeneID:361614"
                     /db_xref="RGD:1308929"
                     /translation="MNPVYSPVQPGAPYGNPKNMAYTGYPTAYPAAAPAYNPSLYPTS
                     SPSYAPATLLMKQAWPQNSSSCGTEGTFHLPVDTGTENRTYQASSAAFRYTAGTPYKV
                     PPTQSNTAPPPYSPSPNPYQTAMYPIRSAYPQQNLYAQGAYYTQPVYAAQPHVIHHTT
                     VVQPNSIPSAIYPAPVAAPRTNGVAMGMVAGTTMAMSAGTLLTTPQHTAIGAHPVSMP
                     TYRAQGTPAYSYVPPHW"
ORIGIN      
        1 gcgccatcca ccaccctact ggacacggac gagggaacga gagcgtcgcc gctgtagcct
       61 tcagagaaga caagggcatc gccgcttctg ctgccgccgc cgcggttttc gtctgcagca
      121 gctcgccggt ggtggtggca catacctttg attcctgcat tccaaaggca aaggatcctc
      181 agtcttccac aatgaacccc gtttacagcc ccgtgcaacc tggggctcct tacggcaacc
      241 ccaagaacat ggcctacact ggttacccca cagcctaccc ggcagctgct cctgcctaca
      301 atcccagcct gtacccgacc agcagcccca gttatgctcc agccactctg ctgatgaaac
      361 aagcctggcc acagaactcc tcttcctgtg gcactgaagg caccttccac ctcccagtgg
      421 acaccgggac ggagaaccga acttaccaag catcctctgc ggctttcaga tatactgcag
      481 ggacaccata caaggtccca ccgacccaga gtaatactgc tccacccccc tactccccat
      541 cacccaaccc ctatcagacg gccatgtatc caatcagaag tgcctatccc cagcagaatc
      601 tgtatgccca gggagcctac tacacacagc ctgtgtatgc tgcccagcct catgtcatcc
      661 accacaccac ggttgtccag cccaacagca ttccctctgc catctaccca gctcctgttg
      721 ctgcccccag gaccaatggt gtggccatgg gcatggtggc aggcaccacc atggcaatgt
      781 cagcaggtac cctgctgacc acaccccagc acactgcaat tggggcgcac cctgtctcca
      841 tgcccactta cagggcccaa ggaacccctg cgtatagcta cgtgcccccg cactggtaaa
      901 gcctgcagcc catccacatc tggagtcaca ttgtatgcaa ctactcgagt cttacctacc
      961 ggtgctgagc ggtcccctag cagcaccacc tctatttgca agaagagaca acggaagtgc
     1021 aagggtcact ttatgcatct ttaatggttt tgatttttat ttttggtttt tgtaaaagct
     1081 gctttttcta atctcctagg agcctcccct tgtgcctccc tcttagccac tgccctcctg
     1141 gctctagccc ttcttcctac ctaaccaggc ccagtcctct ctgcacttct tcccttccct
     1201 aagcatcctg tccctgggat cccagtctag tagctagcag agagtgtggt ttgttgtgat
     1261 ggctcatcag aggctagatt cctgggagag cagaacagag aggccctcca tgtggagtag
     1321 gaacttggag ctgttgagaa ggcctcatct ctgtcagact gtcattttct gaagcaagat
     1381 tagttcagat acaaagaaat acttctaaga accatcacaa cagaccaaga acaaacccac
     1441 ctggttatgt aggagtgtta gcagcttcat gtccccaggc tcagaccctg ggaagacaga
     1501 gttcggggaa gggtggaggg agggaagaca ctggggaagt agtgtgaaga agggcaggag
     1561 ggtgctcact ctggtttgaa aggtctttgg ctacaccgct gggcctggac cttctgattt
     1621 gcacagtgat gttaactgac ctggcacttc cttcagagat gctttgacct cagacctgcc
     1681 aaatggctgc atggcggtgg gatcccagca tccggaggct tttggaggcc aggggtatgc
     1741 ataaccgcac accagcctga gcctcggggc cctcctctaa ggagcttcct cctgaggaga
     1801 gtgggaactg gcagcatttc tctcccttcc tttctgccct tcccagtgcc gggtgcacac
     1861 gtctgcctgt ggggctggca ggcaggccaa gctcttggtt accttgtgcc atgtcacggc
     1921 caaagtgaag gaaccacatt ccaggtggga gctggcggtt ctgaaggtca ggatagtgaa
     1981 agaaaacaat agcaataatc atttcatact catggaactg aagggacctt agcattcatc
     2041 atctcatcat tccctgtctg acaaaggagg aaactgaggc ccagagaagc agaaaggact
     2101 tctctgaacc tcactgtaaa ttagcattaa atgcagcctt cctactactg gcattttacc
     2161 tacaaaaatt ttgctaggga tggattggct tgactttgta aaaattaagt cagcagtgcc
     2221 cacatctggt gagctctgga atgacctctg ggtgtgtgtc tgctattttc cctcatggac
     2281 tccaaaggtg ggggctgaag acataggcag aggccacata gggcagatgg cagaaatcaa
     2341 aattacactt ggaaaacctt tgaagacatc tggaatgttc atcctgaacc tgactccact
     2401 ccaggacaag gagtaggtgg gctggctgga aggagaggct atgcacttag gacagtagct
     2461 ctttatccca agaagagagg acgaatggga gccaccaaga gagggggaca cggatgaggc
     2521 caagcagata cagtcacatc tgggagaaga ggaggcaccc cgggacaagg aagttcttcc
     2581 tagtctcaga caggaaatgg attggccacc ctccagctca gcaagcagag ctgatgccct
     2641 cattgggtgg acaggaatat cctactgtat aaattggatc actggtaata tttcagactt
     2701 gaattatctt cattttgaat tcattttaaa cttggacatc accttcctat ttcccaagtt
     2761 cccctaaagg aaaacaaagg aaacccttga gctggaatga cctcagaaat agtctgactg
     2821 tccccaggtc agagttcttc agcatctgtg gcagaaagcc agaagtttag gctcctcctt
     2881 cctggtctgc caggaacttc aggaccaaga aaactcagct gttctggggt gctgacaagg
     2941 tttcatttta aaacaaagtt ttccagtgtt aatctgattt ttataacacc tctccctgtc
     3001 ctctgtggtc ttgtaggttg atggaggttg ctagagatct tgtctaacat gtaaaaagaa
     3061 tgccaaactg ataatggtgg tgataactgt agggtacctt tgtcgggtgc ttcagaggtt
     3121 tcaaagcact tacgaccttt cataagctga ccccgagagc aagcgacagg tcagttatgc
     3181 cacccacttg ataaatgagg caatagagtc taaggagaaa tgaaatggcc caaagcaagc
     3241 tagatgccgg agtcctggca ggcttcctag actctccaag ctccaggtga cctggtagcg
     3301 gagaagaaag tagacccagg aatggccttt tagtgtttgt tttttccata ccagtaaata
     3361 aaagctgttt gcgccctcac tattcatgta ggttagccct gagagacaag gcatggtgcc
     3421 tgctatttaa ttcatagaga atccaaggct cagaaaagta cagggacttt ctggtaagga
     3481 atcccctgct ggctctcttg tctccaagcc tgatccaaac ataggctcat gttctgaagc
     3541 atctattctc taccccacct tagacctagc ctgtgattca agatcagaaa agccccaagg
     3601 tgaaaaccag gtattgacaa gaaccagacc cactaactct gttttagtaa gagcacaaga
     3661 gcccctgttc agctggcctc accctgttgt ttgacagaga cccatgagtt tggccaagct
     3721 tggggagtca tggcaaaggt actgagccct agtgcacagg gcggtgtgtg cctcggatta
     3781 ggtgaacaca gcttctggca aggtgacagg tagctggcag gaatactgta ggttatcatc
     3841 taaacattct gaatggctca gtggtcaaga cagatgagac cagagctgga agggatgacc
     3901 atgggatgag gggtgtgcac atgacactgc gagctgccac actggcatca ccatacacag
     3961 acaccttgtc cacccccttg tccccagtgt agagctaagg gaggggtgcc tctgttcacc
     4021 agcctccctt atcaccattt gatcatcttc atccaccctg ggccaggaag tctggaaact
     4081 gagtgaaagc ctgagagtct cttgtcatgc ttaaaacaaa acaaaacaaa caaaaaccct
     4141 atttttcttc ctataaaaca cctcttcctt cttgttatcc cagcaatgcc ctgagataca
     4201 taccctcttc cctgaatatt catcagggac aaacacacct atctgtccag acctcttttt
     4261 tgtatgtaaa gtactttgac tttgattgcc aaaacctcta ctttaaagat ggaggcaggg
     4321 tacgcatcat gatgctatga aggggtcata gatttgccaa aggacacaca gctcatgagt
     4381 gaaagagcca agatttgaac tcttctgatc ctctgctctt gttgctgcct cctactggat
     4441 ctcttgtaag cttgtttgaa gaaggaaggg gttacttgct accccacaca gaaacattta
     4501 tggagacttg gggagctctg gtctatcagc tgagcagatt tttaaggatt tttgctttgg
     4561 gccgagacct aaatgggccc cagagacgca gaggtagatc caggtggtag cacaaataga
     4621 aatttgccac aaaagaccga actcagaaca ctgaaggtga cagctgccca gtactgaaga
     4681 taattgagga cagtatcgtc tgtctttcaa caaagagtcc tggttctggg aagcctgcac
     4741 actctggcca tctgacccct gtccagatcc aacgaggtac tttaatggga cacagaataa
     4801 gcctgaacta ctgaaagcag gtctggactg gagtaccagg cttacttgag aaccagagac
     4861 taacttgtgt tcgtgtatcc cagtgctttc tggccatcta gatggttcta agtttgagac
     4921 ctagtgatgt ttctttggaa ggctcgatgc tctgttctaa atagccttca gaaatgagtc
     4981 atggggagca cacaagtagc acaagtcctt tggtcaccaa gttctggcat ccttattgtg
     5041 tagacatgac acatcaaata aggcattggc tgaagcagct tagttcccta catatcagat
     5101 atcttgcccc tgctatgggc tctggccttc agagcattct ggctgaatca gtcatcatcc
     5161 catgtgtgac tcatgttcag caagctccac ctttccatct tgtgttaact atatcactgc
     5221 tgagtgtgtg gcaccaagaa tcttgtcaag cttgggagac tagagaaggc cacgcctggg
     5281 ttggagtgga caaggggagc aaatcaatgg aagaaaccta gctaggttca ctggtcagac
     5341 aacacctgag cctctagaca gagttctgtg gttatgccag gcgggcagca aggtttgtcc
     5401 ttttcctacc cctgttcgct cctagaaaaa acatttgtga gatttggcat tatgtggttc
     5461 caggactcag ctttcaaaat tcccagtagg ccagctccaa cattccatgg ccaaacttgc
     5521 ttgacctaga cttgggtccc actccctcag tttctcctgt ggggatttcc taatttatct
     5581 attaatgcca gccagaaagc catctaagaa cataggagtt gaaactggtt gccacagagc
     5641 cacagagggc atagaagaca gagaagcact tgcttgctgt ggctgctact ttgagtagtc
     5701 cttaggtagc cctgctgtgg cagtgtgtcc tttaccattc cagcctgagg aatctcttcc
     5761 ccaagagaac agatttaaaa cggctttaca gatagcagca gcccacagga atctgctttg
     5821 ggcttgaccc tagctagtag catcctctgt ccttgacccc acctcagcca tcctcctcat
     5881 gcatgaaagt cagactaaat gaagaatagg actggcccag agacctcagg tcagccagat
     5941 cgactggatc tgtcttgtga accaagctcc tcacaaggtg aagctaggct aggcctcttg
     6001 caccttggag ttgtctttta tctttgaagg cccagggcct gtccccttcc tgtcttcaag
     6061 gcatctacac ccctttcata tcacatgaca gagaagcttg ttctcatggc atgtaccatc
     6121 cctgtgaaga gagcgttgtg tatgattttg tattttttaa ttcattttaa cctacaggtt
     6181 ggaatctaat ttttaaattt tattggaact cacattttaa aacaaataaa aacatttaaa
     6241 aataataata attataataa taaacctttg accagtgtct tccaagtagt ttgatcaaat
     6301 aatttatagg tgttttcaaa atacagcctg gagtgtaaag attggagagc cctgtggcca
     6361 cgcttgtgtg tgatgtgtaa atctggcttt gtttgggatt cctttgggtt ttgttttgtt
     6421 ttgaagatca gatagtgatc actctgaatg gttgaagcca agagtttgta actatgatat
     6481 ttactgtaag ctgtagaaca ttcaacaact attaaaagaa agtttccaaa aaaaaaaaaa
     6541 aaaa
//
