LOCUS       NM_001399276             808 bp    mRNA    linear   ROD 17-FEB-2024
DEFINITION  Rattus norvegicus family with sequence similarity 162, member A
            (Fam162a), mRNA.
ACCESSION   NM_001399276 XM_006248413
VERSION     NM_001399276.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 808)
  AUTHORS   Cho,Y.E., Ko,J.H., Kim,Y.J., Yim,J.H., Kim,S.M. and Park,J.H.
  TITLE     mHGTD-P mediates hypoxic neuronal cell death via the release of
            apoptosis-inducing factor
  JOURNAL   Neurosci Lett 416 (2), 144-149 (2007)
   PUBMED   17316997
REFERENCE   2  (bases 1 to 808)
  AUTHORS   Lee,M.J., Kim,J.Y., Suk,K. and Park,J.H.
  TITLE     Identification of the hypoxia-inducible factor 1 alpha-responsive
            HGTD-P gene as a mediator in the mitochondrial apoptotic pathway
  JOURNAL   Mol Cell Biol 24 (9), 3918-3927 (2004)
   PUBMED   15082785
REFERENCE   3  (bases 1 to 808)
  AUTHORS   Glaichenhaus,N. and Cuzin,F.
  TITLE     A role for ID repetitive sequences in growth- and
            transformation-dependent regulation of gene expression in rat
            fibroblasts
  JOURNAL   Cell 50 (7), 1081-1089 (1987)
   PUBMED   3040268
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JACYVU010000222.1.
            
            [WARNING] On Apr 3, 2024 this sequence was replaced by
            NM_001399276.2.
            
            On Jan 5, 2022 this sequence version replaced XM_006248413.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ222091.1, BC097971.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-92                JACYVU010000222.1  43990752-43990843
            93-215              JACYVU010000222.1  44007543-44007665
            216-324             JACYVU010000222.1  44012439-44012547
            325-433             JACYVU010000222.1  44016957-44017065
            434-808             JACYVU010000222.1  44019265-44019639
FEATURES             Location/Qualifiers
     source          1..808
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /map="11q22"
     gene            1..808
                     /gene="Fam162a"
                     /note="family with sequence similarity 162, member A"
                     /db_xref="GeneID:360721"
                     /db_xref="RGD:1590883"
     exon            1..92
                     /gene="Fam162a"
                     /inference="alignment:Splign:2.1.0"
     CDS             59..526
                     /gene="Fam162a"
                     /note="growth and transformation-dependent protein;
                     E2-induced gene 5 protein homolog"
                     /codon_start=1
                     /product="protein FAM162A"
                     /protein_id="NP_001386205.1"
                     /db_xref="GeneID:360721"
                     /db_xref="RGD:1590883"
                     /translation="MWSLRGLRLAAGHCFRLCERNVSSPLRLTRNTDLKRINGFCTKP
                     QESPKAPTQSYRHRVPLHKPTDFEKKILLWSGRFKKEEEIPETISFEMLDAAKNKIRV
                     KVSYLMIALTVAGCVYMVIEGKKAAKRHESLTSLNLERKARLREEAAMKAKAD"
     exon            93..215
                     /gene="Fam162a"
                     /inference="alignment:Splign:2.1.0"
     exon            216..324
                     /gene="Fam162a"
                     /inference="alignment:Splign:2.1.0"
     exon            325..433
                     /gene="Fam162a"
                     /inference="alignment:Splign:2.1.0"
     exon            434..808
                     /gene="Fam162a"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 attgagcgcc agcgccgcgg ccgcggtggg gtgctgtgcg tcggcggatc aggcggtcat
       61 gtggagcctc cgcggcctgc gcctggcggc tggacattgt tttaggttat gtgaaagaaa
      121 tgtttcctcg ccactaaggt taaccaggaa cactgacttg aagaggatca atggattctg
      181 caccaagcca caagaaagtc ccaaagctcc aacccagtct tacagacaca gggtgccgct
      241 tcacaagccc acagacttcg agaagaagat cctgctgtgg tcaggccgct tcaagaagga
      301 ggaagagatc ccagagacaa tctcgtttga gatgcttgac gctgcaaaga acaagatccg
      361 ggtgaaggtc agctatttaa tgattgccct aacagtggca ggatgcgtct atatggttat
      421 tgagggcaag aaggctgcaa aaagacatga gtctttaaca agcttgaacc tagaaaggaa
      481 agcccgtctg agagaggagg cagctatgaa ggccaaagcg gactagacgt atttgtgctg
      541 gatttggaaa agccaggagt acggttgcaa caagaagcct gctttagaaa ggataagggc
      601 tggggattta gctcagtggt agagcgctta cctaggaagc gcaaggccct gggttcggtc
      661 cccagctccg aaaaaaagaa ccaaaaaaaa aaaaaaaaaa aaaaaaaaaa ggatgtgatc
      721 tgagacccac tttgcagaca tgtgcacaga tgtgttccac ttccctattt ctgctgtaga
      781 gaaacaagta aattttctta gagaatga
//
