LOCUS       XM_341438               5491 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus family with sequence similarity 149,
            member A (Fam149a), transcript variant X1, mRNA.
ACCESSION   XM_341438
VERSION     XM_341438.8
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051351.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 2, 2024 this sequence was replaced by
            NM_001427705.1.
            
            On Jan 21, 2021 this sequence version replaced XM_341438.7.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5491
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5491
                     /gene="Fam149a"
                     /note="family with sequence similarity 149, member A;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 18 ESTs, 1 Protein, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 49 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:361153"
                     /db_xref="RGD:1586153"
     CDS             398..2770
                     /gene="Fam149a"
                     /codon_start=1
                     /product="protein FAM149A"
                     /protein_id="XP_341439.3"
                     /db_xref="GeneID:361153"
                     /db_xref="RGD:1586153"
                     /translation="MKVAVLDLGSLFAKIFKISTASPAVSSHPGGAAATGSVDSGAST
                     SLREAETLTLLPSLPPDTAASREPFTPVHTPLPASHPRSSAATHRVEAAGCPGSLPSN
                     SGASIALPLAFYSGSVCSLASGALPSSGALPSSGAVWATLPSVTIPLDSNSNAASSPR
                     NPRQLPAPGDPEPSVWMAPGPVPKTLFFTLPDIGEEWTSDSDSQDDPEGRGLSEGIRK
                     HNSEKNKYPLPTNFTRNVQKAIDKFSSESPSSFSSSGSRTPTEAHNSWPDSSTQSSTT
                     GLSTERSSVSSWRDDEFDKVNAQKVQQLFWEVEELLFEGKVSAQTQNLLTECNEWARR
                     SLHLRVLGRQLIPPTDEGFQHFQGILPSSASQKPHVPNHISSTRELCISGSQIVPEVL
                     SASALTDPDGTEQDLTSCSSLKEEVYHMDGNIEEYFAFDRKQDGDEHLEQNPTLRGKK
                     WRQHGLPPISPVDCIRDAVAAEVFDHVWSNVVEILEDLVRKTWESALTDGKKHKEKLK
                     VAESRSPHVLMSRLNTDVCSVPPSRSSETLQPSLAPHFNPPQFPQPHRFSSNFYRDLS
                     GVMTIQAKPLQQRPTYFADRTQNEQDDKLPGGGVGASSRLRLGRVLDTRGPQTSAKKT
                     PVHRRLPSIASDPQRLKTPTVYSDEILRGTKLQTGIDHLPSPAAAQTSRNRLPPIGSE
                     AGEQNTAASGSRPVSYRGRHPQNRVLSAMPDSMEKSPLRERTIVLEQPSRPSTTHTFL
                     SDTPRKGSLTPVDFAAHTWTGQGILTGSQYLPKSYQRVTLTARKRFQVAS"
ORIGIN      
        1 cataatctgt gcatcaaaca ctagtcttct tcttgagctc tgtgctcctg gtcccttggg
       61 catcttacta cactgtgggg caggagacgt ttctctttgc agaggcaaac ctgcctccct
      121 ctgttacctt ttacaatttc agcaatctgt gggtccactg gagagggctt gtcaaatctg
      181 taaggagcta aacgctgaaa acaacaggtt cctagaggtg gaaaaagacc tagaagcctc
      241 gaggaagccg tgtgccagga ccccaggacc ccctgctcgt ccccagggtc acctgatcca
      301 gattgttgca gggggcggtg gatggagccc tgcagcccaa cacctggcgt ccttgacctc
      361 ctggcaacag taacagaagc ctctccagga ccaaggcatg aaggtcgctg tgttggacct
      421 ggggtctctg tttgccaaga tcttcaagat ctcaacagcg tccccggcgg tctccagcca
      481 ccctggaggt gcagcggcca caggatcagt ggactccgga gccagcacat cacttagaga
      541 ggctgagacc ctgactttgc tcccatctct gcctccagac accgcagcct cacgggaacc
      601 cttcacccct gttcacactc cgctccctgc ctcgcacccc aggagttcgg cagccaccca
      661 tagggtagaa gcagcagggt gtcccggatc tctgcccagc aactcagggg catccatagc
      721 actgccctta gccttctaca gcggctctgt gtgctccttg gcctcagggg ctttgcccag
      781 ctcaggggct ttgcccagct caggggctgt ctgggcgacc ctgccttccg tcaccattcc
      841 cttggacagc aacagcaacg cagcctcaag tccacggaac cctcgccagc tgccagctcc
      901 tggagatcca gagcccagtg tatggatggc cccaggtcct gtccccaaaa ctctgttttt
      961 taccttgcca gacattggcg aggaatggac ctcggacagc gactcccagg atgacccaga
     1021 aggaagggga ctttcagaag gaatcaggaa gcacaactct gaaaagaaca aatatccttt
     1081 acctacaaat tttacgagaa atgtgcagaa agccattgat aaattctcca gcgagtcccc
     1141 ctcatccttt tcatccagtg ggagccgcac acccacagag gcccacaatt catggcctga
     1201 ctcttccaca cagagctcca ccacgggact gtctacggag aggagctcag tttcttcgtg
     1261 gagagatgat gaatttgaca aagtcaatgc acagaaagtc cagcagctgt tttgggaggt
     1321 tgaggaactg ctatttgaag ggaaagtgag tgcccagacc cagaacctcc tgactgaatg
     1381 caacgaatgg gcaagaagat ccctccacct tagggtgtta ggaagacagc tcatcccacc
     1441 aactgatgaa ggtttccaac acttccaggg gatcctgcct agttctgcta gtcagaagcc
     1501 tcatgtcccg aaccacatca gcagcaccag agagctgtgt atttctggct ctcagatagt
     1561 ccctgaggtg ctctcagctt ctgccctgac agaccccgat ggcacagaac aggacctcac
     1621 gtcatgttca tccctgaaag aagaggtcta ccacatggat ggaaacattg aagaatattt
     1681 cgcttttgac aggaagcagg atggggatga gcatcttgaa caaaacccaa cactccgtgg
     1741 caagaagtgg cgtcaacatg ggcttcctcc catttcccct gttgactgta tcagagatgc
     1801 cgtggcagca gaagtgtttg atcacgtttg gagcaatgtt gtagaaatcc tggaagatct
     1861 cgttagaaaa acctgggaat ctgcactcac agatggaaaa aagcataagg aaaagctgaa
     1921 agtggctgag agtagatctc cacacgtgct catgtctcgt ctcaacacgg atgtttgcag
     1981 tgtcccccca tctcgaagct ctgaaacgct ccagccatcc ttggctcccc actttaatcc
     2041 accccagttt cctcagcccc atcgcttctc cagcaacttc taccgtgact tgagtggcgt
     2101 catgacaatt caagccaagc cgcttcagca gagacccacg tactttgcag atcgaacaca
     2161 aaatgagcaa gatgacaaac tgcctggggg aggggttgga gcatcttccc ggctcagact
     2221 tggccgagtt ctagacaccc ggggaccaca gacttctgcc aagaagacac cagtgcatag
     2281 gagactgcct tcaattgctt cagacccaca gagactgaaa acccccactg tctacagtga
     2341 tgaaattctg agaggaacca aactgcaaac tggcatcgac cacctgccct ccccagcagc
     2401 agctcaaacc tcccggaacc ggttaccccc gataggctct gaggctgggg agcagaacac
     2461 agcagcctcc ggatcccgcc ctgtttctta caggggaagg cacccacaga accgtgtgct
     2521 cagcgcgatg cctgacagca tggaaaagtc accccttcga gaaaggacca ttgtcctgga
     2581 gcagccttca aggcccagca cgacacatac attcctgtca gacacaccga gaaaaggctc
     2641 cctgacaccc gtggatttcg ctgctcacac ttggacgggt caaggcattt tgacaggttc
     2701 acagtatctg cctaaatctt atcagagggt aactctgact gcaagaaaga ggttccaagt
     2761 ggcatcgtga tattactgct cacaaattac gaacttgctg gaagacttga agccttggcc
     2821 acaccatttg tcacatgaaa agaagaggaa caagtattac ctggtgtata tactcatctc
     2881 tctggcagca ggagatgcta gaatacctga aaggaacaca agagaataag taactgagtt
     2941 tcaaacactt gaaaaacatt gcaaagagaa taaaagttga actccctaat ccttatggga
     3001 agcatgcctg aggctccttg ggctcctgtg tattgcttaa aagatcctaa tatgccctta
     3061 aattccattt ttatagttaa tgtttgcaca cagataatgt tagtgcattc cctaagaaga
     3121 tgccattttt aactctatac catcacgcac atttctgtct caatctttta atgattcatt
     3181 ccatcaaaac taaataggag taacatttga gacaatttgt ccatttgaaa aaatgattct
     3241 ggttcttctg ttcattgtgc tgactttaaa ataactgttg tatattcaat gtgtaaagtg
     3301 atgggtttca tgatgacctt tgtggtagac cgatttagcc atgaatacct gagagatgtt
     3361 tggtaagcca attgtgttaa aaatgcaaga gtaaactggt ttttgttgtc aaatgtaggc
     3421 agtgcatcta aaagtatccc acgtttaaag gggaatataa gaataattaa aatccattgc
     3481 atatggtccc aacattgaca tttaggttga cacgtttgac aactggacag aggaaattgt
     3541 aacaccaacg tccttacata catcatcccg acctatctct gccgtgacat aatttcttca
     3601 ctacagcctc cctgagccct tgctgaaggc agcagtcccc tctaccctct gcccttttcc
     3661 tactctggat tctcccgacc gtatgtccaa cctgactact acagtcaggg gagtaaagaa
     3721 gacaaaaatg tcagttggag gccaggctcc tttctggtac ttattcctga ttcattctca
     3781 tatacaaaca tctcaaatca gcatactttc ccccttttta tcagctaatg acattacatc
     3841 aacatgaatc ttattaatcg aaaaggaaac tttactacat atgtgtgtgt gtatatatag
     3901 cgtttaaaca tatgataaat tgttttcagg acatttcttg ttataagaag tgaggatcat
     3961 tgtctactta aagatgtttg gaaattgacc cctctgtggc gagaagagtt gaacctgctc
     4021 tttaacatag aatgacaaat cagaggtgac ttcaaacctt tgtcctacct gatagtttct
     4081 gcttcgcgct ctccactcca gtttctgcag tggtggggca tgttagagac atgctaggga
     4141 gtgggtagtg gtcaagctgc tgtattgata acgttgttcc agttggccac tctaaggagg
     4201 gtatctctct ttgcctaggg aatgtgccca gggttgagtg tctcacacca aagcatttgg
     4261 ggcattatca ttcatttctc atcacaagct gtggaagcac ttcagagaaa acatcagtct
     4321 tcaggcagct gctcttgacg tctggataga gagtggctgc catcctgttc accagtgcct
     4381 ggctgacggc tctgaggtcc gttatcattg ctaagagagc tatctactgt gctctcacat
     4441 cccaccagct cacttcatat caattcctag gtgccatcca atggtttctt cttcaaccca
     4501 aagtctgaaa aagggggtag ctcacagcac atctaacaat actcctagat gaattattat
     4561 tctttccaaa gagccatgga agtgattgag tggcagctcg gctgtgtttg ccttcagagg
     4621 tctacagttg gaaatgtatt cttttttttt tctggagctg gggaccgaac ccagggcctt
     4681 gcgcttgcta agcaagcgct ctaccactga gctatatccc caaccctgga aatgtattct
     4741 ttacatccac aaagtaacgg attagaaata gtaaacaggt agcacagttt ttaatcatcc
     4801 aggcgttttg aatggaaagc aaaataccgt taaacgatat cttaaaaccc agaggtcttg
     4861 ctgaacctaa aagaaacctt cttcagaact tattttcaag cctgtattaa aggaatttca
     4921 tttataggtg aagtgggata tgtaccttag taaattatgc ttgtgtgagg atggcgctgc
     4981 ttagactgga aaggggaaat atcaggggat gtgattttac aatactctac ttccagaaat
     5041 gactcttatt gtagtctggt aaaaaattga aaatggaaaa tcacgtctga gaaaaaaatt
     5101 caaatacagg ttagtgactc catgaattaa aatacattta atttatcaca agccaaagaa
     5161 agaatgtggg aatttttaaa aacaattcaa gaaaatataa aatttaatgg aaaatgtcta
     5221 gatttctaag aaaaaaatct atctagctac atagatagat agatagatag atagatagat
     5281 agatagcgag atatagatga actagcttat gtctttatat ttgtgttaat ttgaacttgg
     5341 atggaatgtc tttactaatc gagaggttca tttttaatgc cataaatgat ttcagtatat
     5401 tttttactat cattgttttc ttataacaaa ggatgattgt tcaggagttt taatcattta
     5461 atttttaata aaatgtaaaa tattaaaaga a
//
