LOCUS       NM_001107466            4842 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus family with sequence similarity 120 member B
            (Fam120b), mRNA.
ACCESSION   NM_001107466 XM_001056092 XM_218006
VERSION     NM_001107466.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4842)
  AUTHORS   Li,D., Kang,Q. and Wang,D.M.
  TITLE     Constitutive coactivator of peroxisome proliferator-activated
            receptor (PPARgamma), a novel coactivator of PPARgamma that
            promotes adipogenesis
  JOURNAL   Mol Endocrinol 21 (10), 2320-2333 (2007)
   PUBMED   17595322
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Feb 10, 2021 this sequence version replaced NM_001107466.3.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ210918.1, SRR26643292.767.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-378               JAXUCZ010000001.1  65012226-65012603
            379-1760            JAXUCZ010000001.1  65016535-65017916
            1761-1941           JAXUCZ010000001.1  65025125-65025305
            1942-2043           JAXUCZ010000001.1  65026651-65026752
            2044-2216           JAXUCZ010000001.1  65037379-65037551
            2217-2309           JAXUCZ010000001.1  65040542-65040634
            2310-2516           JAXUCZ010000001.1  65048319-65048525
            2517-2625           JAXUCZ010000001.1  65049729-65049837
            2626-2712           JAXUCZ010000001.1  65051511-65051597
            2713-4842           JAXUCZ010000001.1  65056031-65058160
FEATURES             Location/Qualifiers
     source          1..4842
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q12"
     gene            1..4842
                     /gene="Fam120b"
                     /gene_synonym="RGD1310304"
                     /note="family with sequence similarity 120 member B"
                     /db_xref="GeneID:308218"
                     /db_xref="RGD:1310304"
     exon            1..378
                     /gene="Fam120b"
                     /gene_synonym="RGD1310304"
                     /inference="alignment:Splign:2.1.0"
     exon            379..1760
                     /gene="Fam120b"
                     /gene_synonym="RGD1310304"
                     /inference="alignment:Splign:2.1.0"
     CDS             396..2753
                     /gene="Fam120b"
                     /gene_synonym="RGD1310304"
                     /note="family with sequence similarity 120B"
                     /codon_start=1
                     /product="constitutive coactivator of peroxisome
                     proliferator-activated receptor gamma"
                     /protein_id="NP_001100936.2"
                     /db_xref="GeneID:308218"
                     /db_xref="RGD:1310304"
                     /translation="MGVRGLQGFVGSTCPHICTTVNLHELAESHRAKYPGSTPTIVVD
                     AMCCLRYWYTAESWVCGGQWREYYSALRDFLAAFTSAGIKLIFFFDGTVEPGKRDEWV
                     KRRLKNNREISRIFHYIKSKREQPGRNMFFIPSGLAIFTRFALKSLGQETFCSLQEAD
                     YEVASYGLQHNCLGILGEDTDYLIYDTCPYLSIGDLCLESLQTILLCREKLCESLGLR
                     VSDLPLLACLLGNDITPEGMFESFRYKCLSSYASVKENAGKKGNIILAVSDYISKVLH
                     LYQGEKKIEEMLPLGPNKALFYKGVTSYLLPGQKSPWLVQKPKSIITDKQMASLNPGS
                     KQEVPMCIDPEFKQEVPVCTNPESMQEVPMCMDPEPNQEASVCMDRESKPEVPMCTDP
                     ESKPEVPLYTNPESKQKSPSEIDPKCNLEALTCTYPEVKQEDAMDMEPEIKQATMVSE
                     SEILKVARMHHVHSESYLVYNILSSGEIECSNTLEDELDQALPSQAFIYRPVRQRVYS
                     LLLEDWKDGASTGPVVKEWFVYPGNSLKHPDLVRPLQMTVQGGTPSLEVLWLSQEPAA
                     QARRLDTLLACFNLSSSREELQSVESPLRALCCLLIYLFVQVDTLSLEDLHAFIAQAL
                     CLQGKSTSQLMHLQLDYINSRAVQLGSLLVRGLTTLVLVNSACGFPWTTSDFMPWNVF
                     DGKLFHQKYLQSEKGYGVETLLEQNRSWLTTFHNLKAVVCKACSKENRRIVGRIHWNS
                     HYTGRQGRQGHGSYRSGSTHGHSGQSWRDQGSGGRQHEHDHWRRY"
     exon            1761..1941
                     /gene="Fam120b"
                     /gene_synonym="RGD1310304"
                     /inference="alignment:Splign:2.1.0"
     exon            1942..2043
                     /gene="Fam120b"
                     /gene_synonym="RGD1310304"
                     /inference="alignment:Splign:2.1.0"
     exon            2044..2216
                     /gene="Fam120b"
                     /gene_synonym="RGD1310304"
                     /inference="alignment:Splign:2.1.0"
     exon            2217..2309
                     /gene="Fam120b"
                     /gene_synonym="RGD1310304"
                     /inference="alignment:Splign:2.1.0"
     exon            2310..2516
                     /gene="Fam120b"
                     /gene_synonym="RGD1310304"
                     /inference="alignment:Splign:2.1.0"
     exon            2517..2625
                     /gene="Fam120b"
                     /gene_synonym="RGD1310304"
                     /inference="alignment:Splign:2.1.0"
     exon            2626..2712
                     /gene="Fam120b"
                     /gene_synonym="RGD1310304"
                     /inference="alignment:Splign:2.1.0"
     exon            2713..4842
                     /gene="Fam120b"
                     /gene_synonym="RGD1310304"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aataacggaa gcggaagtga gcacgccgga gactgcgggt ctgaaatcag gttgacgcat
       61 ctacagacac tgactgctgt gctcctctgg gtaggcaagg ctccgggatc ggcccacggc
      121 ctctgcagtc ccacctccct atccggcgct ccttccagcc ttaaatccgc tatccccgcc
      181 gtgaccacgc ccctccgcgc cctacgtcct ggcctctctg catcctggct gctctgcgtc
      241 ctggctgttt ccccggggta gaggggagag gcagccatcc tcctgctgaa gcggggtaga
      301 ggcctttact gagcccagct gaggaccagc gaggtagagt ctcagactct agtagcggct
      361 ggagaactgg tacctgggat tcataaaatc caattatggg tgtaagaggt ttgcaggggt
      421 ttgtgggaag tacctgccca catatatgta caacagtcaa tctccacgag ctggcagaga
      481 gtcaccgagc caagtaccct ggaagtacgc ccaccattgt ggtggacgcc atgtgctgtc
      541 tccgatactg gtacacagca gagtcctggg tgtgcggcgg ccagtggaga gaatactatt
      601 cggctttgag agacttcctc gcggccttca catctgctgg catcaagctg atctttttct
      661 ttgacggcac ggtggagccg ggcaagcgag acgagtgggt aaagcgaaga cttaaaaaca
      721 acagggagat atccaggatc ttccactata tcaagtcaaa aagagagcag ccaggcagga
      781 acatgttctt catcccctcc ggtctggcca tattcacgcg gttcgccctg aagtcgttgg
      841 gccaggagac tttctgctca ttgcaggagg cagactacga ggtggcttct tatggcctgc
      901 agcacaactg ccttgggatc cttggggaag acactgacta cttaatttat gacacttgcc
      961 cctacttgtc aattggtgac ctctgtctgg agagtctcca aaccatcctg ctgtgtcgag
     1021 agaagctctg tgagagcctg ggcctccgtg tgtcagacct ccctctgctg gcctgtctac
     1081 ttggcaatga catcactcca gagggcatgt tcgaaagctt tcggtacaag tgcttgtcat
     1141 cctatgcttc tgtgaaagag aatgcaggca aaaaaggaaa tattatccta gccgtctccg
     1201 actatatctc caaagttctt catttgtatc aaggtgagaa gaagatcgaa gagatgctac
     1261 ccttggggcc aaacaaagct ctcttttata aaggagtaac atcgtacctt ttgccagggc
     1321 agaaatctcc atggttagtt caaaaaccca aaagcataat aacagacaag caaatggcga
     1381 gtttaaaccc cggatccaag caagaagtcc ccatgtgcat agatcctgaa ttcaagcaag
     1441 aagttcctgt gtgcactaat cccgagtcca tgcaagaagt tcccatgtgt atggaccctg
     1501 aacccaacca ggaagcttcc gtgtgcatgg atcgcgaatc caagccagag gttcccatgt
     1561 gcactgatcc tgaatccaag ccagaggttc ccctgtatac aaacccagag agcaagcaaa
     1621 agtcaccttc agaaatagac cccaagtgca atctagaagc actcacgtgt acataccctg
     1681 aagttaaaca agaagatgcc atggatatgg aaccggaaat aaagcaagca accatggttt
     1741 cagagtctga aatcttaaag gttgccagga tgcatcatgt ccactcagaa agctacctag
     1801 tgtacaacat tttgagcagt ggagagatag agtgtagtaa caccctggag gacgagctgg
     1861 accaagccct cccaagccaa gccttcatct accgcccagt ccggcagcgg gtctactcac
     1921 tcttactgga ggactggaaa gacggagcca gcactggtcc agtggtcaag gagtggtttg
     1981 tgtaccctgg taactccctg aagcacccag acctagtcag gcctctgcag atgaccgttc
     2041 aagggggaac gcctagcttg gaagttttgt ggctgagcca agagccagca gcccaggccc
     2101 ggcgcctgga cacattgcta gcctgcttca acctttcctc ctcaagagaa gagctgcaat
     2161 ccgtggagag cccgttgagg gcgctgtgct gcctcttgat ctacctgttt gtccaggtgg
     2221 acactctttc cctggaagat ctgcatgcat ttatcgctca ggccttgtgc ctccaaggaa
     2281 aatcaacctc ccagcttatg cacttacagc tggattacat caactccaga gctgtgcagc
     2341 tggggtccct ccttgtccgt ggcctcacca cattggtact agtcaacagt gcatgtggct
     2401 tcccttggac aaccagcgac tttatgccct ggaatgtatt tgacggcaag cttttccatc
     2461 agaagtacct gcagtctgaa aaaggatatg gcgtggagac tcttttggaa caaaatagat
     2521 cgtggctcac cacgttccac aacctgaagg cagtggtctg caaggcctgc tccaaggaga
     2581 accgacgaat tgtaggcagg atacattgga actctcatta cacagggagg caggggagac
     2641 agggccacgg ctcctacaga tcaggctcca cacatggcca ttctgggcag tcatggagag
     2701 accagggttc aggaggcaga cagcatgagc atgaccactg gagaagatac taggtgctgt
     2761 acaggtaaag tcctccccag cccctcagtg aaccagcaga tgctctgtct tcatagctga
     2821 gggccaaata gttaatgtgt ctcgtgggcc agcttcccaa ccgggatcca ccgacttgtt
     2881 tcaagctgtg tctgcttctt ccagaagagt gtgggaaaag gttcaacgcc gggactccgc
     2941 cctccttcaa ggagtgttta gagtggcatc acccagtctc atcagaggga cagtaactgg
     3001 gaccacactt taaaggaagg aaagattgct tttcagtgga ttctcctgca catactgtaa
     3061 aaagatccca tcggtttgtt tcagacgttg ctcctgactc ccatgaccca gaacacgaga
     3121 cactaacgtc aagaatgctc ttctgacctt agcaggagtc taattccaaa catttgctga
     3181 ctattaaatt gtgaaaatgt ttcctcaaat cattggtctt tgaaatcatg atgtcttctt
     3241 atttttctgt tattgtgaaa aggaaccatg accaaagcga cttacaaaag aaagcattta
     3301 atttaggtct tagggttcca gagggtggta gagcctatgg ccatcgtgtt ggggctagcc
     3361 aactgagaat ggctcagggt tttgaaactt taaagcccac cccccccccc agcaacacac
     3421 ctccatcagc aaagccacgc cccctccagt aaggccacgc ctcctaaccc tttccaccaa
     3481 ccagagacca agctttcaga catactagct tatggggcta ttctcattca gaccaccata
     3541 cataatatct aatagctata tgatcagtca gaaattactt tttcattaga aaaatctagc
     3601 agaaataagc attcatctgt tttttctttt tttttttttt tttttttttg gttctttttt
     3661 ttttcggagc tggggaccga acccagggcc ttgggcttcc taggcaagcg ctctactact
     3721 gagctaaatc cccaaccccc tgtttttttt cttgatccac aaagtatttg gataggaaaa
     3781 aaaaaaccta aattcttgct ttcttgtggg agagttggtt ctgattagag gaatgatggc
     3841 tcagtggtta agaacagtgg cagctcttcc agagacccaa ggtctgatcc ccatcaccca
     3901 cacggtggct cacaactgta actccagttc cagggcaatc gaaagcctct tctggtctct
     3961 gtgagcacta agcacacagt gatgcccaga catgcataca ggaaaaacac ccctaaagat
     4021 gaaatacatg ttaaaaaaaa aagattttta aagaagcaga gtgggttaca gtaagatctt
     4081 ctttaaactc tgaggttctt atccatctcc actggggaaa caagagtagc tgagcctgtc
     4141 cagggccctt acagccctgc tctatctcta gggacacgca gttccctgag gagatgcaag
     4201 ctcactggaa gatgtgtcct tttcgtgctc cggtctttaa gattttgata agcttctaaa
     4261 atgttccttg tcgtctttac agttttgcag accactggct cagccatgct gtaggagctc
     4321 ttgggtttct ccttgagatt cttgtgttta ccagaagggt acagccccat ctcccgcatt
     4381 tgagcatgct tgtgtttgtt cagccccttt ctgctcccgg aggactgagc atagtgtgtc
     4441 cggagagctt gtactgctat gtctgctgcc tagactagga actggctttt ctggtccttc
     4501 ccttgaacac cgtcttcttc ctgtctgcta ctctctgaca tcgctgcctt taggagttct
     4561 gtttccttgc tgtttacctg tgtgactgtg aattaagatt ctgatctctt agactgaaag
     4621 tatatttccg tgaaagttgt tttccgtcac agaagctgca tcctgacttg tcaataaagt
     4681 gtgtatgtca gtcacattta aataagttta aataagccac tgtgttgatg gaatattaat
     4741 cacatttaga acttttccgg ggacagcatt gttttccagt caagtcttgt gatagaattt
     4801 ccacatatca atttaaaata aaaatacatt tttaaactca ta
//
