LOCUS       NM_001107064            1796 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus fatty acid desaturase 6 (Fads6), mRNA.
ACCESSION   NM_001107064 XM_001081675 XM_221105
VERSION     NM_001107064.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1796)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473948.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_221105.4, XM_001081675.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760476,
                              SAMEA5760494 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1796
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q32.1"
     gene            1..1796
                     /gene="Fads6"
                     /gene_synonym="RGD1311950"
                     /note="fatty acid desaturase 6"
                     /db_xref="GeneID:303671"
                     /db_xref="RGD:1311950"
     exon            1..201
                     /gene="Fads6"
                     /gene_synonym="RGD1311950"
                     /inference="alignment:Splign:2.1.0"
     CDS             39..1067
                     /gene="Fads6"
                     /gene_synonym="RGD1311950"
                     /EC_number="1.14.19.-"
                     /note="fatty acid desaturase domain family, member 6"
                     /codon_start=1
                     /product="fatty acid desaturase 6"
                     /protein_id="NP_001100534.1"
                     /db_xref="GeneID:303671"
                     /db_xref="RGD:1311950"
                     /translation="MEPTRSAPPGDGAAEALLKELERQVQDVVRASSWWERHGVDCAI
                     LALSLLALPAGFLCLRFHNVLAFATGITILGVCHYTLTVKGSHLATHSALTESKRWSK
                     ILMIFFVEVCTAFPAEFAKFNHVNMHHGYTNVLGLGDSSTWKMPLLNRYVYMLLGPLL
                     VPLLTPLVALEHLRKEELKTALRALGFICLGLYSQYWLFMNVSGFKSPASALACMLLA
                     RSLLAHPYLHVNIFQHIGLPMFSPDKKPRRIHMMTLGVLNLPRQPVLDWAFGHSLISC
                     HVEHHLFPWLSDHMCLKVKPVVSKFLHDKRLPYNEDSYLARFQLFLSRYEEFMVHVPP
                     ITELVGLQ"
     exon            202..368
                     /gene="Fads6"
                     /gene_synonym="RGD1311950"
                     /inference="alignment:Splign:2.1.0"
     exon            369..549
                     /gene="Fads6"
                     /gene_synonym="RGD1311950"
                     /inference="alignment:Splign:2.1.0"
     exon            550..737
                     /gene="Fads6"
                     /gene_synonym="RGD1311950"
                     /inference="alignment:Splign:2.1.0"
     exon            738..917
                     /gene="Fads6"
                     /gene_synonym="RGD1311950"
                     /inference="alignment:Splign:2.1.0"
     exon            918..1796
                     /gene="Fads6"
                     /gene_synonym="RGD1311950"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tcctcgcttg tccccaacga ggtgcatcca gggagcccat ggagcccact cgcagtgcgc
       61 ctccggggga cggcgctgct gaggcactcc tgaaagagct ggagcgtcag gtgcaggatg
      121 tggtgcgggc gagctcgtgg tgggagcgcc acggtgtgga ctgcgccatc ctcgctctca
      181 gcctgctcgc cctgccggct gggttcctgt gcctacgctt ccataatgtt ctggcctttg
      241 ccactggcat tacaatcttg ggtgtgtgcc actatacact cacggtcaaa ggcagccacc
      301 tggctactca cagtgccctc acagagtcca aacgctggag caagatcttg atgattttct
      361 ttgtggaggt gtgcacagcc tttcctgcag agtttgctaa gttcaaccac gtgaatatgc
      421 accacggtta caccaacgtg ttgggtctgg gagactccag cacatggaag atgcctctcc
      481 tcaaccgcta cgtctacatg ctccttggac cgcttttggt ccccctccta acgccactgg
      541 tagctcttga gcatttgagg aaggaagagc tgaagacggc actgcgggct ttgggcttca
      601 tttgcctggg cctttactct cagtactggc tgttcatgaa cgtgtcgggc ttcaagagcc
      661 ctgcttcagc gctggcctgc atgctgctcg ccaggtccct gctggcccac ccctacctcc
      721 acgtcaatat cttccagcat attggattgc ctatgttctc cccggacaag aagcccaggc
      781 ggattcacat gatgacgctg ggggttctga acctgccccg gcagccagtg ctggactggg
      841 cgttcggcca ctccctcatc agctgccatg tggagcacca cctcttccct tggctctctg
      901 accacatgtg cttgaaggtg aagcccgtgg tatccaagtt tctccacgac aagaggctac
      961 cctataatga agactcgtac ttggctcgat ttcagctgtt tcttagtcgc tatgaggagt
     1021 tcatggtgca tgtcccgccc atcactgagc tggtggggct gcagtgaagg ctgggcccac
     1081 tccctagcca gtcctggcct tcctgtattg ctggcccttg gtggggactg gtgggcctgg
     1141 agacgtctgg gatctgaatt ggagaagagt gttgggagaa gaactgaaag caatccagag
     1201 gctgtgtgtc ctgatcttac taggcctcag atgactccat ctagaatcct tctttctgct
     1261 gcatctgagc cagagggtag ggccgaggtg gctggtgaca ggtgaggtgg ggtactcagg
     1321 aggtacagag atagagccag cctcctcggc tcagacctcc ttggtgctca ggctgttgct
     1381 tcttcctgta ccctctgagg ttttagtccc ccaggctcct ctccctaggg tcagcagggt
     1441 gaggccatgt ttttagcaga cactcttccc ccgcccccca ctcttcaact gaaggagcct
     1501 gtgccacact ggtctcagca gctccaggac acacagagtc agtgagataa aagggaatgt
     1561 atttccaggg aagtgctcca gaggggagca aacccgggga caaaatcgga gaaggaactg
     1621 ctggctttga gcgtgacctc ggctagctct aaacagctct gttttgttcc atgttcagaa
     1681 gactccagcc tgggtgacag aattactggg aggtggttga gactggagga ggtgacctgg
     1741 gactgggctg ggaggatggg gagggatgaa aaatggggtg agggtagggt agtgag
//
