LOCUS       NM_017098                490 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus fatty acid binding protein 6 (Fabp6), mRNA.
ACCESSION   NM_017098
VERSION     NM_017098.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 490)
  AUTHORS   Bonne,A., Gosele,C., den Bieman,M., Gillissen,G., Kreitler,T.,
            Pravenec,M., Kren,V., van Lith,H. and van Zutphen,B.
  TITLE     Sequencing and chromosomal localization of Fabp6 and an intronless
            Fabp6 segment in the rat
  JOURNAL   Mol Biol Rep 30 (3), 173-176 (2003)
   PUBMED   12974472
  REMARK    GeneRIF: The intronless Fabp6 segment, which might be a pseudogene
            of Fabp6, was localized on rat chromosome 15.
REFERENCE   2  (bases 1 to 490)
  AUTHORS   Gong,Y.Z., Everett,E.T., Schwartz,D.A., Norris,J.S. and Wilson,F.A.
  TITLE     Molecular cloning, tissue distribution, and expression of a 14-kDa
            bile acid-binding protein from rat ileal cytosol
  JOURNAL   Proc Natl Acad Sci U S A 91 (11), 4741-4745 (1994)
   PUBMED   8197128
REFERENCE   3  (bases 1 to 490)
  AUTHORS   Fujii,H., Nomura,M., Kanda,T., Amano,O., Iseki,S., Hatakeyama,K.
            and Ono,T.
  TITLE     Cloning of a cDNA encoding rat intestinal 15 kDa protein and its
            tissue distribution
  JOURNAL   Biochem Biophys Res Commun 190 (1), 175-180 (1993)
   PUBMED   8422242
REFERENCE   4  (bases 1 to 490)
  AUTHORS   Vodenlich,A.D. Jr., Gong,Y.Z., Geoghegan,K.F., Lin,M.C.,
            Lanzetti,A.J. and Wilson,F.A.
  TITLE     Identification of the 14 kDa bile acid transport protein of rat
            ileal cytosol as gastrotropin
  JOURNAL   Biochem Biophys Res Commun 177 (3), 1147-1154 (1991)
   PUBMED   2059206
REFERENCE   5  (bases 1 to 490)
  AUTHORS   Kanda,T., Odani,S., Tomoi,M., Matsubara,Y. and Ono,T.
  TITLE     Primary structure of a 15-kDa protein from rat intestinal
            epithelium. Sequence similarity to fatty-acid-binding proteins
  JOURNAL   Eur J Biochem 197 (3), 759-768 (1991)
   PUBMED   2029905
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On Nov 26, 2020 this sequence version replaced NM_017098.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: L22788.1, AI639414.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN17050746, SAMN17050747
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-107               JAXUCZ010000010.1  28569621-28569727   c
            108-283             JAXUCZ010000010.1  28567022-28567197   c
            284-373             JAXUCZ010000010.1  28566046-28566135   c
            374-490             JAXUCZ010000010.1  28565054-28565170   c
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q21"
     gene            1..490
                     /gene="Fabp6"
                     /gene_synonym="IBABP"
                     /note="fatty acid binding protein 6"
                     /db_xref="GeneID:25440"
                     /db_xref="RGD:2592"
     exon            1..107
                     /gene="Fabp6"
                     /gene_synonym="IBABP"
                     /inference="alignment:Splign:2.1.0"
     CDS             41..427
                     /gene="Fabp6"
                     /gene_synonym="IBABP"
                     /note="GT; ILBP; I-15P; I-BABP; intestinal 15 kDa protein;
                     ileal lipid-binding protein; 14 kDa bile acid-binding
                     protein; Fatty acid binding protein 6 (bile acid-binding
                     protein); strain SHR/OlaIpcv fatty acid binding protein 6
                     (Fabp6) pseudogene; fatty acid binding protein 6, ileal"
                     /codon_start=1
                     /product="gastrotropin"
                     /protein_id="NP_058794.2"
                     /db_xref="GeneID:25440"
                     /db_xref="RGD:2592"
                     /translation="MAFTGKYEFESEKNYDEFMKRLGLPGDVIERGRNFKIITEVQQD
                     GENFTWSQSYSGGNIMSNKFTIGKECEMQTMGGKKFKATVKMEGGKVVADFPNYHQTS
                     EVVGDKLVEISTIGDVTYERVSKRVA"
     exon            108..283
                     /gene="Fabp6"
                     /gene_synonym="IBABP"
                     /inference="alignment:Splign:2.1.0"
     exon            284..373
                     /gene="Fabp6"
                     /gene_synonym="IBABP"
                     /inference="alignment:Splign:2.1.0"
     exon            374..490
                     /gene="Fabp6"
                     /gene_synonym="IBABP"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tcctcagctg cctctctgct gccagctctc tcccagcact atggccttca ccggcaaata
       61 cgaatttgaa agtgagaaga attacgacga gttcatgaag cgcctgggtc ttccaggaga
      121 tgtgattgaa aggggacgta acttcaagat catcacagag gtccagcagg atggagagaa
      181 cttcacctgg tcccagtctt actctggggg caacatcatg agcaacaagt tcaccattgg
      241 caaagaatgt gaaatgcaga ccatgggggg caagaagttc aaggcaaccg tgaagatgga
      301 gggtggcaag gtggtggcag acttccccaa ctatcaccag acttcggagg tcgtgggtga
      361 caagttggtg gagatctcca ccatcgggga tgtgacctac gagcgtgtaa gcaagagggt
      421 ggcttgagcc accaggctgg gctctgaggg actgcaaccc atcaataaaa gtgcaccatg
      481 gatcaccact
//
