LOCUS       NM_001108698            1268 bp    mRNA    linear   ROD 02-APR-2024
DEFINITION  Rattus norvegicus FA core complex associated protein 20 (Faap20),
            mRNA.
ACCESSION   NM_001108698 XM_001076708 XM_001076736 XM_342994
VERSION     NM_001108698.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1268)
  AUTHORS   Yan,Z., Guo,R., Paramasivam,M., Shen,W., Ling,C., Fox,D. 3rd,
            Wang,Y., Oostra,A.B., Kuehl,J., Lee,D.Y., Takata,M., Hoatlin,M.E.,
            Schindler,D., Joenje,H., de Winter,J.P., Li,L., Seidman,M.M. and
            Wang,W.
  TITLE     A ubiquitin-binding protein, FAAP20, links RNF8-mediated
            ubiquitination to the Fanconi anemia DNA repair network
  JOURNAL   Mol Cell 47 (1), 61-75 (2012)
   PUBMED   22705371
REFERENCE   2  (bases 1 to 1268)
  AUTHORS   Ali,A.M., Pradhan,A., Singh,T.R., Du,C., Li,J., Wahengbam,K.,
            Grassman,E., Auerbach,A.D., Pang,Q. and Meetei,A.R.
  TITLE     FAAP20: a novel ubiquitin-binding FA nuclear core-complex protein
            required for functional integrity of the FA-BRCA DNA repair pathway
  JOURNAL   Blood 119 (14), 3285-3294 (2012)
   PUBMED   22343915
REFERENCE   3  (bases 1 to 1268)
  AUTHORS   Leung,J.W., Wang,Y., Fong,K.W., Huen,M.S., Li,L. and Chen,J.
  TITLE     Fanconi anemia (FA) binding protein FAAP20 stabilizes FA
            complementation group A (FANCA) and participates in interstrand
            cross-link repair
  JOURNAL   Proc Natl Acad Sci U S A 109 (12), 4491-4496 (2012)
   PUBMED   22396592
REFERENCE   4  (bases 1 to 1268)
  AUTHORS   Kim,H., Yang,K., Dejsuphong,D. and D'Andrea,A.D.
  TITLE     Regulation of Rev1 by the Fanconi anemia core complex
  JOURNAL   Nat Struct Mol Biol 19 (2), 164-170 (2012)
   PUBMED   22266823
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473968.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_342994.2, XM_001076736.1, XM_001076708.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CB608866.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1268
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..1268
                     /gene="Faap20"
                     /gene_synonym="RGD1308923"
                     /note="FA core complex associated protein 20"
                     /db_xref="GeneID:362678"
                     /db_xref="RGD:1308923"
     exon            1..261
                     /gene="Faap20"
                     /gene_synonym="RGD1308923"
                     /inference="alignment:Splign:2.1.0"
     CDS             200..754
                     /gene="Faap20"
                     /gene_synonym="RGD1308923"
                     /note="Fanconi anemia-associated protein of 20 kDa;
                     FANCA-associated protein of 20 kDa; Fanconi anemia core
                     complex associated protein 20"
                     /codon_start=1
                     /product="Fanconi anemia core complex-associated protein
                     20"
                     /protein_id="NP_001102168.1"
                     /db_xref="GeneID:362678"
                     /db_xref="RGD:1308923"
                     /translation="MEEERRLRGRLSRRRPPAGGGPPNCRPWFLSEESKSEPWAALLR
                     STVGGNTDWTPNSQPLPPLPAFPSQESLPDPESTVPPEVFTVGSKTFSWTPFPPALRG
                     SGSSCRLLRCPEGSPGSPAPSLKGCPALDSRQTPSTQECVQSQLVLLNCPLCQKAFDP
                     KLTQLDVDSHLAQCLAESTEDVVW"
     exon            262..406
                     /gene="Faap20"
                     /gene_synonym="RGD1308923"
                     /inference="alignment:Splign:2.1.0"
     exon            407..681
                     /gene="Faap20"
                     /gene_synonym="RGD1308923"
                     /inference="alignment:Splign:2.1.0"
     exon            682..1268
                     /gene="Faap20"
                     /gene_synonym="RGD1308923"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtcgcgactc tccctcaagg cggcagcctc gtgttcccaa cggttgggat ctcggcgcct
       61 tagatttcca gcgccacaaa agggagctgg cacttggcag agcggagagc gggggctctg
      121 gaagcctccg gagcgggtcc cggtcggagg gcgggtctgg ctgtaagtct cacttccgcc
      181 ggacgctctt aggagaagga tggaggagga gcggaggctg cgggggaggc tgagccgccg
      241 caggccgccc gcagggggcg ggccccctaa ctgccgcccc tggtttctct cggaggaaag
      301 taagagtgag ccgtgggctg ctctgctgcg cagcaccgtg ggcgggaaca cggattggac
      361 cccgaacagt cagccattac caccgctgcc tgcttttccc agccaggaat ctctgcctga
      421 cccagagtcc actgtgcctc ctgaggtctt cactgtagga tccaagactt tttcctggac
      481 gccttttccg cctgcccttc gtggctctgg aagctcctgc cgcctgttac gttgtcctga
      541 aggctctccg gggtcacctg ctccatccct gaaaggatgc cctgcactgg attcccgtca
      601 aactcccagc acccaggagt gtgtgcagag tcaacttgtg ttgctgaact gcccattgtg
      661 ccagaaggca tttgacccga agctgaccca gctagatgtg gatagccacc ttgctcagtg
      721 cttggctgaa agcacagaag acgtggtgtg gtgacctgca ggctgccttg ctgtatcctc
      781 tccttcaagc ctatatgctg acattggatg tggctgctga gaggtctctg ggacacctga
      841 gggctggctc cttctggttt tgttcctggg cacaggacgt agtgctggtc actgacagca
      901 ggcagcagat cccctgcggg ctcattttca ttgtcagcct aattgcattt ggaatcacct
      961 aggagacaca tctcagggtg gagacacatc tcagggtggg cctgtgaaac tgtttctaga
     1021 gattaactgg gaaaggaaga gccacttgaa tgtgggtggc acccgtggcc tggggtccca
     1081 ctgattgact atgtgtggca ccatggcctg gggtcccact gactgaaaag ggaaaaagga
     1141 gaaattgagc tgtttcctga ttggggatgt gatgagacac acttctcacc tatgccctcc
     1201 ctgccacagg gactgtacct tcttcaactt gtgagccaga ataaatctta agttgctttc
     1261 cagtattt
//
