LOCUS       XM_039094240            1047 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus coagulation factor VII (F7),
            transcript variant X2, mRNA.
ACCESSION   XM_039094240
VERSION     XM_039094240.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051351.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039094240.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1047
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1047
                     /gene="F7"
                     /note="coagulation factor VII; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 3 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:260320"
                     /db_xref="RGD:628678"
     CDS             43..900
                     /gene="F7"
                     /codon_start=1
                     /product="coagulation factor VII isoform X2"
                     /protein_id="XP_038950168.1"
                     /db_xref="GeneID:260320"
                     /db_xref="RGD:628678"
                     /translation="MVPQTHGLLLLYFLLQLQGPLGAVVFITQEEAHGVLHRQRRANS
                     LLEELWSSSLERECNEERCSFEEAREIFKSPERTKQFWTIYSDGDQCASNPCQNGGTC
                     QDHLKSYVCFCPLDFEGRNCEKNKNEQLICANENGDCDQYCRDHVGTKRTCSCHEDYV
                     LQPDEVSCKPKVEYPCGRIPVVEKRNFSRPQGRIVGGYVCPKGECPWQAVLKFNEALL
                     CGAVLLDTRWIVTAAHCFDKFGKLVNTTSVRRRGLSKYGWWNRSSCPTSTPAAGLTMT
                     SPWSAFTGL"
ORIGIN      
        1 gcagcatctg gacagtcccc agccaaacgc aacagtctca tcatggttcc acagactcac
       61 ggactgctgc ttctctactt tctgctccag ctccagggac ccctaggggc tgtggttttc
      121 ataacccagg aggaagcaca cggtgtccta cacaggcaaa ggcgtgccaa ctcactccta
      181 gaggagcttt ggtctagctc cttggagagg gagtgcaatg aagagcggtg ctcctttgag
      241 gaggcccgag agatcttcaa gagccctgag agaaccaagc agttctggac tatttacagc
      301 gatggcgacc agtgtgcctc gaatccatgt cagaacgggg gtacctgcca ggatcacctc
      361 aagtcttatg tctgcttctg ccccctagac tttgagggcc ggaactgtga gaaaaacaag
      421 aatgagcagc tgatctgtgc aaatgaaaat ggtgactgtg accagtactg cagggaccac
      481 gtagggacca agcgtacctg tagctgtcac gaggactacg tgctgcagcc agatgaggtg
      541 tcctgcaaac caaaagttga gtacccatgc gggagaatac ctgttgtaga aaaaagaaac
      601 ttcagcagac cccaaggccg gattgtggga ggctatgtgt gccccaaagg ggagtgccca
      661 tggcaggctg tgctgaaatt caatgaggca ttgctgtgtg gggccgtcct gctggacacc
      721 agatggatag taactgcagc ccactgcttc gataaattcg ggaaattggt gaacacgact
      781 tcagtgagaa ggaggggact gagcaagtac ggctggtgga acaggtcatc atgcccaaca
      841 agtacacccg cggcaggact gaccatgaca tcgccctggt ccgccttcac cggcctgtaa
      901 ccttcactga ctacgtggta cctctgtgtc tgcctgaacg ggccttctcc gagaacaccc
      961 tagccagcat ccgcttctcg agggtcagcg gctggggcca gctactggac cgtggtgcca
     1021 cagctctgga gctcatggtc atcgagg
//
