LOCUS       XM_006253145            2650 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus coagulation factor XI (F11),
            transcript variant X2, mRNA.
ACCESSION   XM_006253145
VERSION     XM_006253145.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051351.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006253145.4.
            
            On Jan 21, 2021 this sequence version replaced XM_006253145.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2650
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2650
                     /gene="F11"
                     /gene_synonym="LRRGT00086"
                     /note="coagulation factor XI; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 14 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:290757"
                     /db_xref="RGD:1309364"
     CDS             136..1794
                     /gene="F11"
                     /gene_synonym="LRRGT00086"
                     /codon_start=1
                     /product="coagulation factor XI isoform X2"
                     /protein_id="XP_006253207.1"
                     /db_xref="GeneID:290757"
                     /db_xref="RGD:1309364"
                     /translation="MNRFACILKDSLTETLPMVHMTGAVSGYSFKQCPQQLSACSKNV
                     YVNLDMKGMNYNSSAVKNARECQERCTNDAHCQFFTYATGHFPSVDHRKMCLLKYTQM
                     GTPTSITKLDSVVSGFSLKSCGLSNLACIRDIFPNTVLADLNIDSVLAPDAFVCRRIC
                     THHPTCLFFTFFTQAWPKESQRHLCLLKTSESGFPSTRITKSNALSGFSLQHCRHSIP
                     VFCHPNFYNDTDFLGEELDIVDVKGKESCQKMCSDNVRCQFFTYYPSRGSCSERKGRC
                     YLKLSSNGSPTRILHGRGGISGYTLRLCKMDNVCTTKIRPRVFGGAASVHGEWPWQVT
                     LHTTQGHLCGGSIIGNRWILTAAHCFSGTETPKTLRVYGGIVNQSEINEDTTFFRVQE
                     MIIHDQYTSAESGFDIALLKLEPAMNYTDFQRPICLPSKGDRNVVHTECWVTGWGYTK
                     SRDEVQSTLQKAKVPLVSNEECQTRYRKHKITNKVICAGYKEGGKDTCKGDSGGPLSC
                     KHNGVWHLVGITSWGEGCGQKERPGVYTNVAKYVDWILEKTQSE"
ORIGIN      
        1 catcagcttt caaggaggtg acctaagtac tgttttcaca ccgagtgcca cgtactgcca
       61 gctggtctgc acacaccacc cacgttgctt gctcttcacg ttcatggctg agtcatcttc
      121 tgacgatccc accaaatgaa caggtttgcc tgcatcctga aggacagtct cacagaaaca
      181 ttgccgatgg tacacatgac aggagcggtt tctggatatt ccttcaagca atgccctcag
      241 caattaagtg cttgcagcaa aaacgtgtac gtgaacctgg acatgaaggg catgaactat
      301 aacagttctg ccgtgaagaa tgctcgagaa tgtcaggaga gatgcaccaa cgatgcccac
      361 tgccagtttt tcacatacgc aacggggcat tttcccagtg tggaccatcg taaaatgtgt
      421 cttttgaagt acacccaaat ggggacgcca acttcaataa caaagctcga cagtgtggta
      481 tctggatttt cactgaagtc ctgtgggctt tcgaacctgg cttgtatcag ggacattttc
      541 ccgaacaccg tgcttgcaga ccttaacatt gacagcgtgt tggccccaga tgcttttgtc
      601 tgtcgtcgca tttgcacgca tcaccccacg tgcctgtttt ttacattctt tacccaagcg
      661 tggccaaaag aatcccagag acatctttgc ctccttaaaa catctgaaag cggatttcca
      721 agcacacgca tcacaaagag caacgccctt tccgggttca gtctccagca ctgcaggcac
      781 agcatcccag tattctgtca tccgaacttt tacaacgaca ctgatttctt gggagaagaa
      841 ctggacatcg tcgatgtgaa aggcaaagaa tcctgccaga aaatgtgctc tgacaacgtc
      901 cgctgccagt tctttaccta ttatccctct cgaggatctt gcagtgagag gaagggcaga
      961 tgttacttaa agctttcttc aaacggatct ccaactagaa tacttcatgg gaggggaggc
     1021 atctctggat acacgctgag gctgtgcaaa atggataatg tatgcacaac caaaatcagg
     1081 cccagggtgt tcggaggagc tgcgtctgtt cacggcgagt ggccatggca ggtgaccctg
     1141 cacaccaccc agggacacct gtgtggaggc tccatcattg gaaaccggtg gatattgaca
     1201 gcggctcatt gtttctctgg gacagagaca cctaaaactc tgcgtgtcta cggtggtatt
     1261 gtaaatcaat cagaaataaa tgaagatacc actttcttca gggttcaaga aatgataatt
     1321 catgatcaat atacatcggc agaaagtggg tttgacattg ccctcttaaa actggaaccg
     1381 gccatgaatt acacagattt tcagcggcca atatgcctgc cttccaaagg agacagaaac
     1441 gtagttcaca cagaatgctg ggtgactgga tggggataca caaaatcaag agatgaagta
     1501 caaagtactc tccagaaagc caaggtacca ttggtgtcga atgaagaatg tcaaacaaga
     1561 tacagaaaac ataaaataac caacaaggtg atctgtgcag gatataagga aggagggaag
     1621 gatacgtgta agggagattc tggagggccc ctgtcctgca aacacaatgg ggtctggcac
     1681 ttggtgggca tcacaagctg gggtgaaggc tgcggccaga aagagaggcc gggtgtctac
     1741 accaacgtgg ccaagtatgt ggactggatt ttggagaaaa ctcagtcgga atgaaagagt
     1801 tcaacaggtg tcatttcgtg gccctggaag actattccac agaagagagc atgatgtgtc
     1861 tcatgaagac acggggaagc tgtatcttca ctgtcaggaa ctggaggggc ttgatgtatg
     1921 taagaacgca cagaaagaaa actattattt tcagaattcc cgatctgtga gaatcacagg
     1981 ttgctttctg tatccagcta ctctcaagga aaccaacaca acgaggagat ttttaaaata
     2041 aaaacacagc agataaacta ggaaagtatc gagtaatggt gctgtttgtc ttttagtctt
     2101 tgtgacagat accttaagca gttcatgaaa gggaaaactt cttttgccca cctttcctga
     2161 gggttcagcc gatggcctgt ttggctggct cttgttttag cctgaggtga ggcagaacac
     2221 tatggcacta ttggctggtg gagaaggagt tcgctcagct tatggtaacc aggaagcaaa
     2281 tggaaacagg aaggtattgg ggacaagaat ggtcctccaa ggacatactg tcaatcactt
     2341 atttcttcca atgacacccc actccctaaa ctcccactcc ttcccagata gcaccactgg
     2401 ctggaggcag tcctagctgg caccaagaga aaggttgcag aaaccatata aagacctgtg
     2461 aagtgcaaga tcgaaaaccc agaagaaatg cagacaggag ctcaaaatgt ccatttacag
     2521 gaattttttc ttctctgcct atatgaatgt ccctcctgtg taaaggaaga ctgacccaat
     2581 cccgtgatgg gttttgagaa gtctgttatg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg
     2641 tgtgtgtgtc
//
