LOCUS       NM_001107985            3364 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus exostosin-like glycosyltransferase 1 (Extl1),
            mRNA.
ACCESSION   NM_001107985 XM_001068341 XM_233547
VERSION     NM_001107985.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3364)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473968.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_233547.4, XM_001068341.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760396,
                              SAMEA5760494 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3364
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..3364
                     /gene="Extl1"
                     /note="exostosin-like glycosyltransferase 1"
                     /db_xref="GeneID:313610"
                     /db_xref="RGD:1309572"
     exon            1..828
                     /gene="Extl1"
                     /inference="alignment:Splign:2.1.0"
     CDS             65..2077
                     /gene="Extl1"
                     /EC_number="2.4.1.224"
                     /note="exostoses-like 1; exostoses (multiple)-like 1"
                     /codon_start=1
                     /product="exostosin-like 1"
                     /protein_id="NP_001101455.1"
                     /db_xref="GeneID:313610"
                     /db_xref="RGD:1309572"
                     /translation="MLWRRKSFWLALSAFWLLLILLGVFPLRLAVSPRPLPGRSQGWP
                     RWLDATFLQSFSQPETNPEEDVQQLPRVSRGSSCTWGACFDTSKCRGKVLKIFVHSAA
                     GPTTEAQRRILDSLEGSRYYALSPAEACLLLFLPSQDRRGACGPLPPNWNGGRNHLVL
                     SLYPAPCTRLGQAMVAEASPSLDIFRPGFDVALPYLPEAHPLKGGAPGSLQRHGPQPG
                     ATLVAVAEERGRWRITTTHASACPWDRNCEQDPGPQQTYPGEILPNVTFCLIPGHRSA
                     TSCFLQALQAGCIPVLLSPRWELPFSEVIDWTKAAIVADERLPLQVLAALREMLPSRV
                     LALRQQTQFLWTAYFSSVEKVVHTTLEIIQDRIWGASAHPSLMWNSPPGALLALPTFS
                     TSLQDFPFYHLQLGSSPGSSFSAVIWVGVSEESPPKLIQEVAGSRHCAQILILWNSEK
                     PPPDRWPKTAVPLTVIEGHRKVSDRFFLYSNISTNVILSLDAQSTLSTSEVDFAFVVW
                     QSFPERMVGFVTWSHFWDEARQGWGYSAEMANEFSMVLTTAAFYHRYYHTLFTHSLPK
                     ALRSIADETPTCVDILMNFLVATVTKLPPIKVPYSRQHQEAAPMASEGPRPVPEPQAL
                     DQDCINRLAAGLGHMPLVSSRVRLDPVLFKDPVSVQRKKYRSLEKP"
     exon            829..919
                     /gene="Extl1"
                     /inference="alignment:Splign:2.1.0"
     exon            920..1027
                     /gene="Extl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1028..1147
                     /gene="Extl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1148..1280
                     /gene="Extl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1281..1387
                     /gene="Extl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1388..1477
                     /gene="Extl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1478..1564
                     /gene="Extl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1565..1725
                     /gene="Extl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1726..1894
                     /gene="Extl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1895..3364
                     /gene="Extl1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcctccttcc ctacttgcta cagaaattcc taatttcctt ctagccctag ctgtgggtgg
       61 ccacatgctg tggagaagaa agtccttctg gctggcattg tcagccttct ggctcctcct
      121 catcctccta ggagtcttcc cccttcgcct ggcagtgtct ccccgtcctc ttccagggcg
      181 ctcccaaggt tggccccgct ggctggatgc taccttccta cagagtttct cccagcctga
      241 gacgaacccc gaagaagatg ttcaacagct ccctcgagtc tcccggggga gcagctgcac
      301 ctggggagcc tgctttgaca cctccaaatg tagggggaaa gtcctcaaga tctttgtaca
      361 ctccgcggct ggtccgacca ctgaggctca gcgcaggatc ctggactcct tggagggctc
      421 ccgctactat gcactcagcc cagcggaggc ttgccttctc ctctttctcc ccagccagga
      481 ccgtagagga gcatgcgggc ccctgcctcc gaactggaac ggaggccgga accatctggt
      541 gctcagtctc tacccagccc cttgcaccag gctgggacag gcgatggtag ctgaggctag
      601 cccctccttg gacatcttcc gaccaggctt cgatgtagcg ctcccgtatc tccctgaagc
      661 tcacccattg aaaggcgggg cccctggcag cctgcagcgg cacggtcccc agcctggggc
      721 caccttagtg gcggtagcag aggagagggg caggtggcgt attacaacca cccacgcctc
      781 agcctgcccc tgggacagga actgtgaaca agatcctgga ccccaacaga cctacccagg
      841 agagatactt cccaatgtca ccttctgcct cattcctggc caccgatctg ctacctcctg
      901 ctttctccaa gcccttcagg ctggctgcat ccctgtgctc ctcagccccc gctgggagct
      961 gcctttctct gaagtcatcg actggaccaa agcagccatc gttgcggatg agaggctccc
     1021 actgcaggtt ctggctgcgc tccgtgaaat gctcccttcg cgggttctcg ccctgcgcca
     1081 gcagacccag tttctgtgga ccgcttactt ctcctcagtg gaaaaagtcg ttcataccac
     1141 cctagagatc attcaggacc ggatctgggg tgcatcagct cacccctcac tgatgtggaa
     1201 tagccccccg ggggcactcc tggctctgcc cactttttcc acgagccttc aagacttccc
     1261 cttttatcat ctgcaactgg gctccagccc tgggagcagt ttcagcgccg tgatctgggt
     1321 gggcgtctcc gaagagtccc cgccgaagct catccaggaa gtggcaggtt cccggcactg
     1381 tgcccagatc ctgatcctct ggaacagtga gaagccaccc cctgataggt ggcccaagac
     1441 agcagtgccc ctaacagtca ttgagggaca caggaaggtc agcgaccgtt tcttcctgta
     1501 cagcaacatc agcaccaatg tcatcctcag ccttgatgct cagagcactc tttctaccag
     1561 tgaggtggac tttgcctttg tggtgtggca gagttttcct gagcggatgg tgggctttgt
     1621 gacgtggagc cacttctggg atgaggcccg gcagggctgg ggctacagtg ctgagatggc
     1681 caatgaattc tccatggtcc tgaccaccgc ggctttctac cacagatact accacaccct
     1741 cttcactcac tccctgccta aagccctgag gagcatagcc gatgagactc ccacctgtgt
     1801 tgacatcctg atgaacttcc tggtagcaac cgtcaccaaa ctgcccccta tcaaggtgcc
     1861 ttacagcagg cagcaccagg aggctgcacc aatggcttct gagggtccaa gacccgtgcc
     1921 ggagcctcag gccctggatc aggactgcat caaccgttta gcagcagggc tgggccacat
     1981 gcctctggtt tcctctcgag tgcgtctgga tccggtgctg ttcaaggacc cggtatcagt
     2041 gcaacgcaag aagtatcgca gtttagagaa accctaggcg agtcgctcta actgcctgct
     2101 ggacacgaga cagatcaaag tcctgtcctg gttggccaat cacaataggg attgctgagg
     2161 gccgggaacc cggaccttcc ccggctgcgg tggggttgcg tttggcacgt ttcgtacagg
     2221 ccggtgtaca ggatggtgca caggctcatc ttgttccccg aaatggcttt ctctgcatct
     2281 ctgcctggtc cacatctgac ccgcactcac ctccttggtg gtctcgaagt cctcgcacga
     2341 ttcccgccca gtggccttga gcacaccacc cggccccagg acccgcctgg gagctccgga
     2401 gaacgggtcc tgccctcctc tctttggtct ggcaggtgca ttgtgcgtat ttgagcaatg
     2461 gctgcgagag tattaactgg ttgccagcgt gggggaacac gggcagaatg tgcactagac
     2521 aatacgctgt cccttaccct ggagtcaacg tagaatgcag tcaccaggat tgccaggatc
     2581 aatcaagagt gaacagaggt caggagtccg ggataaccag aggattgggt gttgcgtgcc
     2641 agcttcacgg cagacgccga atcttgggtg accagcagca ttgcactacc aatattgacc
     2701 actagaggtc agctgctgca cttctctccc tccaaaggaa tgaagtttgg ttttgctttc
     2761 tttatagttt gttattgctt ttgtttgttt gtttttgttt ttgtttttca agtaagggtt
     2821 tctctgggta gtcttggctg tcctggaact cactctgtat gccaggttgg cctcaaattc
     2881 acagagatcc acctgccgtt cgcttcctga gtgctgagat taaattcatg cactacactc
     2941 cccgactgct tcttgaattt agagggtcgg gaggggggag gaggcgagac aaggtccgag
     3001 tctgtaaccc actctggcct ggaactctac agcagtctta ttgcctcagt tttccaagtg
     3061 ttagagttac aggggtgagc cacagtgcca gactgaaatg gagttaaaga ctaccgataa
     3121 aatggggcac tggtgtgtgc agaccctagt atgagaacct gggaggaata tgacagaact
     3181 ccactttgac ccaaacactt ggagctcggg ttgttggcag atgggctggt cctgaggaag
     3241 agagctgtcc tcagcgtcct gtaggtgaga gtggagtggg ggaggggagg ctgcttttcc
     3301 tgggttcatc cacctggaac tggaattatc gcttccgaaa taaagcacgt gtccttgccc
     3361 actc
//
