LOCUS       XM_039100835            4042 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus exocyst complex component 3-like 2
            (Exoc3l2), mRNA.
ACCESSION   XM_039100835
VERSION     XM_039100835.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100835.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4042
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4042
                     /gene="Exoc3l2"
                     /note="exocyst complex component 3-like 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 21 ESTs, 4 long SRA reads, 4 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 49 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:686809"
                     /db_xref="RGD:1592539"
     CDS             167..2533
                     /gene="Exoc3l2"
                     /codon_start=1
                     /product="exocyst complex component 3-like protein 2"
                     /protein_id="XP_038956763.1"
                     /db_xref="GeneID:686809"
                     /db_xref="RGD:1592539"
                     /translation="MPILKSLGVGDPKVPRAGTLPLRSSRNPFEETPTLEEEDGELGT
                     LPNGTSCRRRATLEKLAGLAPFRLGWTSGRRAGSPGDRQVRSFLGRVLAPGIRRSSAD
                     FGLLNRLQGFRTHGDEEPAGEAARRLAFLRLGRGPKPRRASLAERLVPAGEAAPEPPP
                     KVPEPPKIKEPLSVLEILGLIQRRELARADEHILELEAEAPAEAEAGAGRRARDVALL
                     YEALQRELWALVRESLAAPGPGTGAVAQLGLVLLQEEEADARRGPGAARKLRAHWAEA
                     VARAARERLEEAAAPGARGTLSGQLEALRARLLEDVAAVRGRLAPAYPAGLRAGAVYL
                     RGYHEALAEWLGAAARRRLPLADRYALLHWHNQVYPREILGLVDVVALENGELGPLLS
                     AGTLRGLEDECVTDVKAQTRAALLRVLQEDEEQWGSMDYRPSNLAQDVCELLEEHTER
                     APHISQEFVERMAYCCLGGLAEFLQSFQQRVERFHENPGVRELPSDTYISRTISMVNC
                     GPPLRSLAERLARVGPPESEPAREASAIALDRVTRLCHRVLAELLFQELQPHFNKLMR
                     RKWLSSSEALDGIVGTLGAQALALRRMQDEPYQVLVAELHRRALVEYVRPLLRGRLRC
                     RSARTRSRMAGRLREDAAQLQRLFRRLESQAYWLDQVVPHLAEILQLEDTPSIQVEVG
                     VLVRDYPDIRRKHVAALLDIRGLRNTAARQEILAVARDLELSEGGALSPSRDRAFFAD
                     IPVPRTSFCLGLPLFLGRLPVSRLARPNLACLPLRPRPPSPVRARADR"
ORIGIN      
        1 ccctggcccc agagagggag gggcttcctg acaggaaatt gtcctcctcc aacccccccc
       61 cccctcagat ccaagctctc agcattccta gcccaagtag tctggggact ggacagcaag
      121 aaggacagaa ggacaggcac agacggaagg tgccagtctg tcaaaaatgc caatcctgaa
      181 gagcctgggg gtgggcgacc ctaaggtgcc gagagcaggg actctgcccc tgcggtcctc
      241 tcgcaacccc tttgaagaga ctccaacgct ggaagaagag gatggggaac tggggacact
      301 ccccaatggg acatcgtgcc gccgccgggc cacactggag aagctggctg gtctggcccc
      361 cttccggctg ggctggactt caggccggcg ggcaggcagc cccggggacc ggcaagtccg
      421 ctctttcttg ggccgcgtgc tggcaccggg catacggagg agctcagcag atttcggcct
      481 cttaaaccgg cttcaggggt tccgaaccca tggcgacgag gagccagctg gggaagccgc
      541 tcgaagactg gctttcctga gactcggacg tgggcccaag cccaggcggg catccctggc
      601 agaaagactg gtgcctgcag gcgaggcagc ccctgagccc ccacccaaag tcccggagcc
      661 gcccaaaata aaagaaccac tgtcagtgct ggagatcctg ggcctgatcc agaggcgcga
      721 gctggcgcga gcggacgagc acatcctgga gctggaggcg gaggcgcccg cggaggctga
      781 ggcgggcgcg gggcggcgcg cgcgggacgt ggcgctgctg tacgaggcgc tgcagcgcga
      841 gctctgggcg ctggtgcgcg agtcgctggc ggcccccgga cccggcacgg gcgcggtggc
      901 gcagctgggc ctcgtgctgc tgcaggagga ggaggcggac gcgcgccgcg gccccggggc
      961 ggcccgcaag ctacgcgcgc actgggccga ggcggtggcg cgcgcggcgc gcgaacggct
     1021 ggaggaggcg gcggccccgg gcgcgcgcgg gacgctgtct gggcagctgg aggcgctacg
     1081 cgcgcgcctg ctggaagacg tggccgctgt gcgcggacgc ctggcgcccg cctaccctgc
     1141 ggggctgcgc gccggtgctg tctacctgcg cggctaccac gaggcgctgg ccgagtggct
     1201 cggcgcggcc gcgcgccgca ggctccctct ggccgatcgt tacgcattgc tgcactggca
     1261 caatcaggtg taccccaggg agatcctggg cctggtagac gtggttgcct tggagaacgg
     1321 ggagctgggg cccctcctgt ctgctggcac ccttcgaggt ctggaagatg aatgtgtcac
     1381 agatgtgaag gctcagaccc gagcagccct tcttcgagtg ttgcaggaag atgaggagca
     1441 gtggggcagc atggactacc gacccagcaa tctagcccag gatgtttgtg agctgctaga
     1501 agagcacaca gagcgagcac cgcacatcag tcaggagttc gtggagagga tggcctactg
     1561 ctgcctggga gggctggcgg agttcctgca gagcttccag caacgagtgg agcgatttca
     1621 cgagaaccca ggggtccgcg agctgccctc cgacacctac atcagcagga caatctcgat
     1681 ggtcaactgt gggccccccc tgaggtctct ggctgagcga ctggccaggg tggggccccc
     1741 tgaaagtgaa ccggcccggg aagcttcagc catcgctctg gaccgtgtga cccgactctg
     1801 ccatcgtgtt cttgctgaat tgttgttcca ggaactacag cctcatttca acaagctgat
     1861 gcgcaggaag tggcttagca gttcggaagc tctggatggc atcgtgggca cgctcggcgc
     1921 ccaggccctg gccctgcgca ggatgcagga tgaaccatac caggttctgg tggctgagct
     1981 gcaccggcgg gcgctggtgg agtacgtgcg gccactgctc cgcgggcgcc tgcgctgtcg
     2041 ttctgcgagg acccgcagcc gcatggccgg gaggctccgt gaggacgcgg cacagttgca
     2101 gcggttgttt cggcggctgg agtcccaggc ttattggctt gaccaggtgg tgccacactt
     2161 ggccgagatc ctgcagttgg aggacactcc gagcatccag gtggaggtcg gggtgctggt
     2221 gcgggactac ccagacatca ggcggaagca tgtggcagcc ctccttgaca tcagaggtct
     2281 tcgaaacaca gctgcccgtc aggagatcct ggcggtggcc cgggacctgg aactatctga
     2341 aggtggtgcc ctatcaccct ctagggaccg tgccttcttt gccgacatcc ctgtgccccg
     2401 cacatctttc tgcctcggtc tccctctctt cttgggacgc ctcccagtgt cccggctggc
     2461 caggcccaat ctggcttgtc tgcccctgcg gcctcgtcct ccatcaccag ttagagcccg
     2521 agctgatcgc tgaggggccc agtgcccatg ttgctgctga tacaccctcc tcccttccac
     2581 gtgattccct gcctgagaca ccgatctctg agatgggagg gtccttagat atcccaccca
     2641 gcccggagca tcccctccag aagggaaact gaggccagaa cgagcaaaga gctccccaag
     2701 gcttccaggg tcattcccgc accctcctcc ctcataggcc agcatggcga ggagccttct
     2761 ggaaggctct acagaaatat cccagcccca cctcctttcc cctcacctca aggtctggcc
     2821 ccaatccaac gtattaagga atggtagata cttagaataa agaggttttt atttaacact
     2881 aggaagggct gagtcccaag tgcaggggcg ggaaaacagg gcccaaggcc aagcactctt
     2941 ttgcacacac ccaaggccac cagggctggg gtccaactcc tagggaagcc acaaatgacc
     3001 agatactcct tagttgcccg ttgataccaa gtccttgagc tgtggctctg aggccggccc
     3061 ttgtctgttc tgagtcagat aacactgttt tatccatccc agtgtctgat gttctgggtc
     3121 tcctgttgcc accttgacac agccctccca cccatgctta aggagtgggg ggaaccttgc
     3181 ccagagagga aggagctggg gggttgggct ggcggcatcc agggcgccct cctggattga
     3241 tgcaggaaaa tctcagggtg ggaaattttc cagcctctca agccggagcc cagccggatc
     3301 cgaatcccca cagagccctt gaggtcacct ccctgctgac ctctgcccct ccggcctcag
     3361 ctggacagct cgtgatggat gcttcctggt ccagattatg ttttatttta ttttttcctt
     3421 aagaagtcag aaagaggagg cagccagggg tcagcacagg ggccggggtt ggaacctcac
     3481 gcacgcctgg acattggcaa caacatggcg gctgtaaggc tctagaccct gagcctcctg
     3541 gtgccctcag tctctgtgct gtgcttcctg tccctcctgg gaagttgctt aacttgtctt
     3601 tgcccaatgc tcctcctcct tccttgacct tctgagagtg tcactgacga gcaggagagg
     3661 ggaactgact gcttttgtgg gcacttacac aattacacat gtatttaatc tcggtgtggt
     3721 tatgccctgt cattttctga cttgttatcc ccgtcactca aaagcaactt tctcgtcagg
     3781 cttggccaca gaagggctgt catcccagca gtcaggggct gaggcactta acttctgttc
     3841 agtgttgggt tagactgcct acatctcaag accccacccc acaacaaaag tgtgggggat
     3901 cgggcagggg aaaggccacg ttgcctgccg ccacgcttaa tagactaagc ctgatcccag
     3961 gacccacatg gtggagaaaa cgaggtccta aatgtcttct gaccgacacc cccccccaaa
     4021 ataaaatgga ataacaaagc aa
//
