LOCUS       NM_001191972            2310 bp    mRNA    linear   ROD 29-MAR-2024
DEFINITION  Rattus norvegicus even-skipped homeobox 1 (Evx1), mRNA.
ACCESSION   NM_001191972 XM_575482
VERSION     NM_001191972.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2310)
  AUTHORS   Florea,L., Di Francesco,V., Miller,J., Turner,R., Yao,A.,
            Harris,M., Walenz,B., Mobarry,C., Merkulov,G.V., Charlab,R.,
            Dew,I., Deng,Z., Istrail,S., Li,P. and Sutton,G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000004.1.
            
            On Jul 17, 2010 this sequence version replaced XM_575482.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760383,
                              SAMEA5760434 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-427               JAXUCZ010000004.1  82747192-82747618
            428-684             JAXUCZ010000004.1  82749117-82749373
            685-2310            JAXUCZ010000004.1  82749944-82751569
FEATURES             Location/Qualifiers
     source          1..2310
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q24"
     gene            1..2310
                     /gene="Evx1"
                     /gene_synonym="RGD1565788"
                     /note="even-skipped homeobox 1"
                     /db_xref="GeneID:103690342"
                     /db_xref="RGD:11434685"
     CDS             1..1224
                     /gene="Evx1"
                     /gene_synonym="RGD1565788"
                     /note="even skipped homeotic gene 1 homolog"
                     /codon_start=1
                     /product="homeobox even-skipped homolog protein 1"
                     /protein_id="NP_001178901.1"
                     /db_xref="GeneID:103690342"
                     /db_xref="RGD:11434685"
                     /translation="MESRKDMVMFLDGGQLGSLVGKRVSNLSEAVSSPLPEPPEKMVP
                     HGCLSPRAGPPTSRERGGGGQEEEPVDGLAGSAAGLGAEPRSAGAAMLGPGPPVPSAD
                     SLSGQGQPSSSDTESDFYEEIEVSCTPDCATGNAEYQHSKAPDSDALGSSPNSGSEAP
                     KSNGGSGGSGSQGTLACSASDQMRRYRTAFTREQIARLEKEFYRENYVSRPRRCELAA
                     ALNLPETTIKVWFQNRRMKDKRQRLAMTWPHPADPAFYTYMMSHAAAAGGLPYPFPSH
                     LPLPYYSPVGLGAASAASAAASPFSGPLRPLDTFRVLSQPYPRPELLCAFRHPPLYPG
                     PAHGLGASAGGPCSCLACHSGPSNGLAPRAAAASDFTCASTSRSDSFLTFAPSVLSKA
                     SSVALDQREEVPLTR"
     exon            1..427
                     /gene="Evx1"
                     /gene_synonym="RGD1565788"
                     /inference="alignment:Splign:2.1.0"
     exon            428..684
                     /gene="Evx1"
                     /gene_synonym="RGD1565788"
                     /inference="alignment:Splign:2.1.0"
     exon            685..2310
                     /gene="Evx1"
                     /gene_synonym="RGD1565788"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggagagcc gaaaggacat ggttatgttt ttggatgggg gtcagcttgg cagtctggtt
       61 ggtaagaggg tttctaattt gtccgaagcc gtgagcagcc cgctgcctga accgccagag
      121 aagatggtgc cccacggttg cctgagcccg cgagccggcc ctccgacttc ccgggagcgt
      181 ggcgggggag gccaggagga ggagccggtg gatggactag caggcagcgc tgcagggctg
      241 ggcgccgagc cacggtctgc tggagcggcc atgcttggcc cgggaccccc agtcccctcc
      301 gcggacagcc tctctggcca agggcaacct agtagctcag acaccgagtc ggatttctat
      361 gaagaaatcg aggtgagctg caccccggac tgcgccaccg ggaacgccga gtaccagcac
      421 agcaaagcgc cagactccga tgcactgggc agcagtccta acagtggcag cgaggccccc
      481 aagagtaacg gtggcagcgg cggcagcggc tcacaaggca ccctggcctg cagcgccagt
      541 gaccagatgc gccgataccg cacggccttt accagggagc agattgcaag gctggagaaa
      601 gagttctaca gggagaacta cgtttcaaga ccgcggagat gcgagttggc agcagcccta
      661 aaccttcctg aaactaccat caaggtgtgg tttcagaacc gacgcatgaa ggacaagcga
      721 cagcggctgg ccatgacgtg gccgcaccca gccgaccccg ccttctacac ctacatgatg
      781 agccacgcgg cggccgcggg cggcctgccc taccccttcc cgtcgcacct gcccctgccc
      841 tactactcgc ccgtgggcct gggtgccgcg tccgccgcct cggccgccgc ttcgcccttc
      901 agcggccccc tgcgcccgct cgacaccttc cgcgtgctct cgcagcccta cccgcgaccc
      961 gaactgctgt gcgccttccg ccacccaccg ctctaccccg ggccggcgca cggactgggt
     1021 gcctcggccg gcggcccctg ctcctgcctc gcctgccaca gcggcccctc caatgggctg
     1081 gcgccgaggg ccgccgccgc ctcagacttc acttgtgcct ccacctcccg ctcggactcc
     1141 ttcctcacgt tcgccccctc tgtgctcagc aaggcctcct ccgtggcgtt ggaccagaga
     1201 gaggaggtgc ccctcaccag ataagggggc gccctcaggg ctgccggctg caggacgtca
     1261 tggggtgggg gtggggggag tcttcgagac tcctccagga tcctacctgt cacctctcgt
     1321 ctcagatgaa gaggggaaag gatgtggggg ggacaccata aaggactcgg cctagaggat
     1381 ccaggagccc cagaagcgca gtgaatgttg ctgcttggag caggaatggg gtgggaaagg
     1441 ttgagagagc ttcccctggg atggtcaggc tttgccaccc tccacaaaag cacaaccctg
     1501 tcagaggttg aggccttggt tcaacagcta accggcaaca accccactcc cacagccctc
     1561 ctacccttca cctgggcccc ccactctcct gtcaagggca agcattgcga agggaaatcg
     1621 ctgtttcttg gaacaaaatg ctgtgtatgc agagcaggta gagattaatc ttcagcagct
     1681 tttccaaagc atgcaggggg cttgttggtg gcaacaaacc agccatttag gggagagatg
     1741 atttactgcc agggactcca tcacacagca tcttttggtt ctagcctcta ccagcccctg
     1801 acctcttccc atattcctgg ctttgtgaca tctcacaact tgcagctcca gccttctccc
     1861 tttcggtttg gcattggcag agaagctgca gggcctccag tctccccagg cagcttctgt
     1921 gaggcgaacc tcttctccct gaacccagca cacagcctga ttagcaagtg atgtgtgcgg
     1981 agggtttttg aatgttgaat gtatgtataa taatgaaccc cactctgctg ggccaccaag
     2041 cccggagctg agcccttata acaaggcgcc ctgggaagag cttagggaat ggagacttct
     2101 cacattcttc tttcattgtc tcccccaatt gacacagggc cttggctttc cgctgtcagt
     2161 acaaaccttc agcacctctg gaggaccctg tctctcccct tcactggggt tcactggggg
     2221 agccacttat gaactcctgt actcatcctt atagccagtg tttgaggaaa aggacaactt
     2281 caagcatccc atgcaagctt cactccactg
//
