LOCUS       NM_001107066            6375 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus envoplakin (Evpl), mRNA.
ACCESSION   NM_001107066 XM_001081714 XM_221129
VERSION     NM_001107066.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 6375)
  AUTHORS   Guo,Z., Neilson,L.J., Zhong,H., Murray,P.S., Zanivan,S. and
            Zaidel-Bar,R.
  TITLE     E-cadherin interactome complexity and robustness resolved by
            quantitative proteomics
  JOURNAL   Sci Signal 7 (354), rs7 (2014)
   PUBMED   25468996
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6375)
  AUTHORS   Gonzalez-Begne,M., Lu,B., Han,X., Hagen,F.K., Hand,A.R.,
            Melvin,J.E. and Yates,J.R.
  TITLE     Proteomic analysis of human parotid gland exosomes by
            multidimensional protein identification technology (MudPIT)
  JOURNAL   J Proteome Res 8 (3), 1304-1314 (2009)
   PUBMED   19199708
REFERENCE   3  (bases 1 to 6375)
  AUTHORS   Gonzales,P.A., Pisitkun,T., Hoffert,J.D., Tchapyjnikov,D.,
            Star,R.A., Kleta,R., Wang,N.S. and Knepper,M.A.
  TITLE     Large-scale proteomics and phosphoproteomics of urinary exosomes
  JOURNAL   J Am Soc Nephrol 20 (2), 363-379 (2009)
   PUBMED   19056867
REFERENCE   4  (bases 1 to 6375)
  AUTHORS   Lee,C.H., Marekov,L.N., Kim,S., Brahim,J.S., Park,M.H. and
            Steinert,P.M.
  TITLE     Small proline-rich protein 1 is the major component of the cell
            envelope of normal human oral keratinocytes
  JOURNAL   FEBS Lett 477 (3), 268-272 (2000)
   PUBMED   10908733
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On Oct 29, 2022 this sequence version replaced NM_001107066.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643287.26192.1,
                                           SRR26643294.42894.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760389 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-189               JAXUCZ010000010.1  101973468-101973656 c
            190-289             JAXUCZ010000010.1  101970656-101970755 c
            290-444             JAXUCZ010000010.1  101970345-101970499 c
            445-571             JAXUCZ010000010.1  101970129-101970255 c
            572-697             JAXUCZ010000010.1  101969340-101969465 c
            698-736             JAXUCZ010000010.1  101969139-101969177 c
            737-898             JAXUCZ010000010.1  101968871-101969032 c
            899-1006            JAXUCZ010000010.1  101968681-101968788 c
            1007-1102           JAXUCZ010000010.1  101968461-101968556 c
            1103-1228           JAXUCZ010000010.1  101967041-101967166 c
            1229-1375           JAXUCZ010000010.1  101966522-101966668 c
            1376-1530           JAXUCZ010000010.1  101966070-101966224 c
            1531-1628           JAXUCZ010000010.1  101965864-101965961 c
            1629-1801           JAXUCZ010000010.1  101965490-101965662 c
            1802-1980           JAXUCZ010000010.1  101964214-101964392 c
            1981-2119           JAXUCZ010000010.1  101963992-101964130 c
            2120-2313           JAXUCZ010000010.1  101963698-101963891 c
            2314-2464           JAXUCZ010000010.1  101963247-101963397 c
            2465-2548           JAXUCZ010000010.1  101961768-101961851 c
            2549-2659           JAXUCZ010000010.1  101961547-101961657 c
            2660-2752           JAXUCZ010000010.1  101961363-101961455 c
            2753-6375           JAXUCZ010000010.1  101957107-101960729 c
FEATURES             Location/Qualifiers
     source          1..6375
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q32.1"
     gene            1..6375
                     /gene="Evpl"
                     /note="envoplakin"
                     /db_xref="GeneID:303687"
                     /db_xref="RGD:1306141"
     exon            1..189
                     /gene="Evpl"
                     /inference="alignment:Splign:2.1.0"
     CDS             92..6181
                     /gene="Evpl"
                     /codon_start=1
                     /product="envoplakin"
                     /protein_id="NP_001100536.1"
                     /db_xref="GeneID:303687"
                     /db_xref="RGD:1306141"
                     /translation="MFKGLSKGSPAKGSPKGSPAKGSPKGSPNKHSRAATQELALLIS
                     RMQANADQVERDILETQKKLQQDRQNGAQNQALQHQQETGRNLKEAEVLLKDLFLDVD
                     KARRLKHPQAEEIEKDIKQLHERVTQECAEYRALYEKIVLPPDVGPRVDWTRVLEQKQ
                     KLICEGHYGPGMAELEQQVAEHNILQREIEAYGQQLRTLVGPDANAIRNQYRDLLKAA
                     SWRRQSLGSLYTHLQGCTKQLGALADQQGRILQQDWSDLMPDPAGVRREYEHFKQHEL
                     LAQEQSINQLEDDAERMVELGHPAIGPIQAHQEALKMEWQNFLNLCICQESQLQHVED
                     YRRFQEEADSASQTLAKLSSNLDTKYSFGAGDSSVSPTELLLQLEAEEKQLAIAERTI
                     GELQRRSQEVAPLPQRRNPPKQPLHVDSICDWDSGEVQLLRGERYTLKDNADPYTWVV
                     QGPGGETKSAPAACLCIPAPDPEAVAKASRLASELQTLKQKLSTEKSRLKNASAEHLQ
                     QGQQAPAGSAPADPQAQKLLSQMTQLDGDLGQVERQVLSWARSPLNDSSPLKDLEGRI
                     QSCEGTAQHLQNLGAEKEAAQQECEAFLSTKPTGSAALQLPVVLNNVKNKYSDVHSLC
                     YLYGEKAKAALGLEKQIQEADGIIQGFEATLAQEGPIPEGSGALQERVSELQRQRKEL
                     LQQQACVLGLHRQLKAAEHACGALQNNFQEFCQDLPRQQRQVRALTDRYHSVGDQLDL
                     REKILQDASLTHQQLKNSRDNLSSWLEQLPHHRVQPSDGPSQIAYKLQAQKRLIQEIL
                     GREQDQATVARLTRDLQEALQEYELRADTYRCSLEPTLAVSAPKRLRVISLKENIQAQ
                     EKNLTKAYTEVAAAEQQQLHQLEFAKKMLEKKELNEDFQAIHSARQGSGSPAHTKTES
                     EVLKTQLEEERKRVAEVQRELEERRQQLLQLRTQQPVARLEEKEVVEFYRDPQLKSNV
                     LQASSRLEEEGKRRARLQAELEVVAQKVVHLEGKRKAMQPHLLTKEVTQIERDPGLDS
                     QVTQLHNEMQGLRGENAVLAARLEGLKDELLTLEQKEINVKEKVVVKEVVKVEKDLEM
                     VKAAQTLRLQIEEDAARRKGAKEAVAKTQARIKDLEQAISSVEPKVIVKEVKKVEQDP
                     GLLKEASRLRSLLEEEKNKNVMLARELQELQDKYRAVEKQKPKVQLQERVSEIFQVHP
                     ETEQEILRLRAQLQETGSKKSCVEREVEKLLPELEVLRAQKPVVEYKEVTQEVVRHEK
                     NPEVLREIDRLKAQLNELVNTHGRCQEQLIRLQGERDEWKRERSKVETKMVNKEVVRH
                     EKDPVLEKEAERLRQEVREAVQKRRAAEDAVYELQNKYLLLERRRPEEQIVVQEVVVT
                     QKDPKLHEEHSRLSRSLDEEVGRRRQLELEVRQLSASVEEEEAMLSFEEDRSKKLAAE
                     RELRQLTLKIQELEKRPPALQEKIIMEEVVKLEKDPDLERSTEALRRELDQEKNRVIE
                     LHRECKGLQVEVDLLQKTKSQEKTIYKEVIRVEKDPVLESERARVWETLNRERAARQS
                     REEDVRSLKERIDRAEALRRSWSLQKARDQASQDCGRLQRELRELEQQKLQKAQQLQE
                     EGRLLSQKTESERQKAAQRSQALSQLEAAILHEKDKIYEKERTLRDLHTKVSREELNQ
                     ETQTRETNLSTKICILEPETGNDMSPYEAYKRGIIDRGQYLQLQELECDWEEVTTSSP
                     CGEESVLLDRKSGKQYSIEAALRCRRISKEEYHRYKDGRLPISEFALLVAGETKPSSS
                     LSIGSIISKSPVCSPGPQSTGFFSPGLSLGLTEDSFPIAGVYDTTTDNKCSIKAAVAK
                     NMLDPITGQKLLEAQAATGGIVDLLSRERYSVHKAVEQGLIENTSTQRLLNAQKAFTG
                     IEDPVTRKRLSVGEAIQKGWMPQESVLPHLLVQHLTGGLIDPKRTGRIPVPQAVLCGM
                     ISEDLGQLLQDESSYEKDLTDPITKERLSYKEAMGRCHKDPLSGLLLLPAMLEGYRCY
                     RVASPTLPRSCVR"
     exon            190..289
                     /gene="Evpl"
                     /inference="alignment:Splign:2.1.0"
     exon            290..444
                     /gene="Evpl"
                     /inference="alignment:Splign:2.1.0"
     exon            445..571
                     /gene="Evpl"
                     /inference="alignment:Splign:2.1.0"
     exon            572..697
                     /gene="Evpl"
                     /inference="alignment:Splign:2.1.0"
     exon            698..736
                     /gene="Evpl"
                     /inference="alignment:Splign:2.1.0"
     exon            737..898
                     /gene="Evpl"
                     /inference="alignment:Splign:2.1.0"
     exon            899..1006
                     /gene="Evpl"
                     /inference="alignment:Splign:2.1.0"
     exon            1007..1102
                     /gene="Evpl"
                     /inference="alignment:Splign:2.1.0"
     exon            1103..1228
                     /gene="Evpl"
                     /inference="alignment:Splign:2.1.0"
     exon            1229..1375
                     /gene="Evpl"
                     /inference="alignment:Splign:2.1.0"
     exon            1376..1530
                     /gene="Evpl"
                     /inference="alignment:Splign:2.1.0"
     exon            1531..1628
                     /gene="Evpl"
                     /inference="alignment:Splign:2.1.0"
     exon            1629..1801
                     /gene="Evpl"
                     /inference="alignment:Splign:2.1.0"
     exon            1802..1980
                     /gene="Evpl"
                     /inference="alignment:Splign:2.1.0"
     exon            1981..2119
                     /gene="Evpl"
                     /inference="alignment:Splign:2.1.0"
     exon            2120..2313
                     /gene="Evpl"
                     /inference="alignment:Splign:2.1.0"
     exon            2314..2464
                     /gene="Evpl"
                     /inference="alignment:Splign:2.1.0"
     exon            2465..2548
                     /gene="Evpl"
                     /inference="alignment:Splign:2.1.0"
     exon            2549..2659
                     /gene="Evpl"
                     /inference="alignment:Splign:2.1.0"
     exon            2660..2752
                     /gene="Evpl"
                     /inference="alignment:Splign:2.1.0"
     exon            2753..6375
                     /gene="Evpl"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agagcccggc tggtagccag cgaagacacg cgtcgccttc ccgccctcct tccaggagag
       61 cccagcctga accggcgcct gcttcaccac catgttcaag gggctgagca aaggctctcc
      121 agccaagggg tcccccaagg gctccccagc taaggggtcc cctaagggct cccccaacaa
      181 gcacagtcgg gctgcaaccc aggaactggc tctgctcatc tctcgcatgc aagccaatgc
      241 tgaccaggta gagagggaca ttttggagac tcagaagaag ctgcagcaag atcggcagaa
      301 tggtgcacag aatcaggcac tacagcacca gcaggagacg ggccgcaacc tgaaggaagc
      361 ggaggtactc ctcaaagatc tcttcctgga tgtagacaag gctcggcgcc tcaagcaccc
      421 acaggctgag gagattgaga aagacatcaa gcagctgcac gaacgagtga cccaggagtg
      481 tgcggagtat cgagctctgt atgagaagat agtgctgccg ccggatgtgg ggcccagggt
      541 cgactggaca cgggtgctgg agcagaaaca gaagctgatc tgtgagggcc actatgggcc
      601 tgggatggca gaactggaac agcaggtggc cgagcacaac atcctgcaga gggaaatcga
      661 ggcttacggg cagcagctgc ggacactggt gggaccggat gcaaacgcca tcaggaacca
      721 ataccgtgac ctactgaagg cagcctcgtg gcgccggcag agtctgggca gcttgtacac
      781 acacctgcag ggctgcacga agcagctggg cgccctggcg gatcaacaag gccgcatcct
      841 gcagcaggat tggagtgacc tcatgcctga ccccgctggt gtgaggcgag agtatgagca
      901 cttcaagcag catgagctgc tggcccagga acagagtata aaccagttgg aggatgacgc
      961 agagcgcatg gtcgagctcg ggcacccggc cattgggccc atccaggccc accaggaggc
     1021 cctcaaaatg gagtggcaga atttcctaaa cctgtgcatc tgtcaggaga gccagctgca
     1081 gcatgtggag gactaccgaa ggttccagga agaggccgac tcagccagcc agaccctggc
     1141 aaagctcagc tccaacctgg acaccaagta cagctttggc gctggggact cctctgtctc
     1201 cccaacagag ctcctgctac agctggaggc agaggagaag cagctggcca tagcagagag
     1261 gactattgga gagctgcagc gacgaagcca ggaggtggcc ccgctgccac agcgcaggaa
     1321 cccacccaag cagcccctgc acgtggacag catctgtgac tgggactccg gagaagtgca
     1381 gctgcttcgg ggagagcggt acacactcaa ggataatgct gacccctaca cctgggtggt
     1441 tcagggccct ggaggagaga ccaagagtgc cccagctgcc tgcctctgca tcccagcacc
     1501 agacccagaa gctgtagcca aagcctccag gttggcctcc gagctgcaga ccctgaagca
     1561 gaagctgtct acagagaaga gtcgtctcaa gaatgcttca gcagagcact tacagcaggg
     1621 ccagcaggct ccggcaggct cagccccggc tgacccacag gctcagaagc tcctgtcaca
     1681 gatgacccag ctggatgggg atctgggaca ggtagagagg caggtgctga gctgggctcg
     1741 gagcccgttg aacgactctt ctccactgaa ggacctagag ggccgaatcc agagctgtga
     1801 gggcacggca cagcatcttc agaacctggg agctgagaag gaggcagccc agcaggagtg
     1861 tgaggcgttt ctgtcgacta agcctacagg ctcagcggcc ctgcagctgc ctgtggtcct
     1921 caataatgtc aagaacaagt atagtgatgt gcatagcctg tgctacctct atggggagaa
     1981 agccaaggct gctctgggcc tggagaagca gatccaggag gcagatggga tcatccaagg
     2041 ctttgaagct accctggcac aggagggccc catccctgaa ggctctgggg cactgcagga
     2101 gagggtcagc gagctgcagc gccagcggaa agagctcctc cagcagcagg cctgcgtgtt
     2161 ggggctgcac cggcagctga aggccgcgga gcacgcgtgc ggtgcgctgc agaacaattt
     2221 ccaagagttc tgccaggacc tgccgcgcca gcagcgccaa gtgcgagccc tcaccgaccg
     2281 ttaccacagc gtgggggacc agctggattt gagggagaag atactacagg atgccagcct
     2341 cacccaccag cagctcaaga acagcaggga caacctgagc tcctggctgg agcagctgcc
     2401 ccaccaccgt gtgcagccca gcgacgggcc aagccagatc gcctacaagc tgcaagcaca
     2461 gaagaggctg atacaggaaa tcctgggtcg tgagcaggac caggccacag tggcccgcct
     2521 cacccgggac ctgcaggagg ctctccagga gtatgagctg cgagcagaca cctaccgctg
     2581 ctccctggag cccaccttgg cggtgtccgc ccctaagaga ctcagagtga tttccttaaa
     2641 ggagaacatc caggctcagg agaagaacct tactaaagct tacactgagg tcgccgcagc
     2701 ggaacagcag cagctgcacc agctggagtt tgctaagaag atgctggaga agaaggagct
     2761 caatgaggac ttccaagcca tccacagtgc aagacaagga tctggcagtc cagcacatac
     2821 aaagacagag tcagaggtcc tgaagaccca gctcgaggaa gagaggaaac gcgtggctga
     2881 ggtgcagcgt gaactggagg agcggaggca gcagctgctg cagctgagga cccagcagcc
     2941 tgtggctcgg ctggaggaga aggaagtggt agagttctac cgggaccccc agctaaagag
     3001 taacgtgctt caggcatcgt cccggctgga ggaagaaggc aagaggcgag cccgcctaca
     3061 agccgagctg gaggtggtgg cccaaaaggt tgtccacttg gagggcaaga ggaaggccat
     3121 gcagcctcac ctgctgacca aagaggtcac ccaaattgag agggaccccg gcctggacag
     3181 ccaggttacc cagctccaca atgagatgca ggggctgcgt ggggagaacg ccgtcctcgc
     3241 agccaggctg gaggggctga aggatgagtt gctgaccctg gagcagaagg agataaatgt
     3301 gaaggagaag gtggtggtga aggaggtagt taaggtggag aaggatctgg aaatggtgaa
     3361 ggcggcccag acgctaaggc tgcagatcga ggaagatgct gcacggagga agggggcgaa
     3421 ggaagcagta gccaagacac aggctcgcat caaagacctg gagcaggcga tcagctccgt
     3481 ggagcccaag gtcattgtga aggaggtgaa gaaagtggag caggaccctg ggcttctcaa
     3541 ggaagcctcc aggctgagaa gcctcctgga ggaggagaag aacaagaacg tcatgttggc
     3601 cagggaactg caggaactgc aggacaagta cagggcggta gagaagcaga agcctaaggt
     3661 gcagctgcag gagcgcgtca gcgagatctt ccaggtgcac ccggagacag agcaggagat
     3721 cctgaggctc cgggcccagc tgcaggagac aggcagcaag aagagctgtg tggagcggga
     3781 ggtggagaag ctgctgcctg agctggaggt cctgcgggct cagaagcccg tggtggaata
     3841 taaggaggtg acgcaggagg tggtgaggca cgagaagaac ccagaggtgc tccgggagat
     3901 cgaccgcctc aaggctcagc tcaatgaact ggtcaacacc cacgggcgct gtcaagagca
     3961 gctcatccgg ctccagggcg aacgcgatga gtggaagcgt gagcggtcca aggtggagac
     4021 caagatggtg aacaaagagg tggtgaggca tgagaaggat ccagtgctgg agaaagaggc
     4081 cgagaggctc cggcaggagg tgcgggaggc cgtccagaag aggcgagccg ccgaggatgc
     4141 tgtctacgag ctgcagaaca agtatctgct gctggagagg agacgccccg aggagcagat
     4201 cgtagtgcag gaggtggtgg tcacccagaa ggacccgaag ctgcacgagg agcacagccg
     4261 gctgagccgg agcttggatg aggaggtggg gaggcggcgg cagctggagc tggaggtgcg
     4321 gcagctgagc gccagcgtgg aggaggagga ggccatgctc agcttcgagg aggaccgcag
     4381 caagaagctg gctgcggaga gggagctgcg gcaactgacc ctgaagatcc aggagctgga
     4441 gaagcggcct cctgccctgc aggaaaagat catcatggag gaggtagtca agttagaaaa
     4501 ggatccggat ctggagaggt ccacagaagc tctgaggcga gagctggatc aggagaagaa
     4561 ccgggtgatc gagctacacc gggagtgcaa gggcctgcag gttgaggtcg acctccttca
     4621 gaaaacgaaa tcacaggaaa agaccatata taaggaagtg atcagggtgg agaaggaccc
     4681 agtcctggag agcgagaggg cccgtgtgtg ggaaaccctt aaccgggagc gagcagcacg
     4741 ccagagtcgg gaggaggatg tccggagctt gaaagagcgg atcgaccgag ccgaggctct
     4801 gaggaggtcc tggtcactcc agaaggcccg ggaccaggca agccaggact gtgggcggct
     4861 gcagagagag ctccgagagc tggagcagca gaagctacag aaagcccagc agctacaaga
     4921 ggaggggcgg ctgcttagcc agaagacgga gagcgagcgc cagaaggccg ctcagcggag
     4981 ccaggccctc tcacagctcg aggctgccat tctccatgaa aaggacaaga tatacgagaa
     5041 ggaaaggacc ctcagggacc tgcacaccaa agtgagccgg gaggagctca accaggaaac
     5101 ccagacacgg gagaccaacc tttccaccaa gatctgcatc ttggaaccag agaccgggaa
     5161 tgacatgtct ccctacgagg cctacaagag gggtatcatc gacagaggcc agtacctcca
     5221 gctgcaggag ctggagtgtg actgggaaga agttaccacc tccagtccct gtggggagga
     5281 gtctgtgctc ttggaccgca agagcgggaa gcaatactcc attgaggccg ccctccgctg
     5341 ccgccgcatc tccaaagaag aatatcacag gtacaaagat ggccgcctcc ccatctccga
     5401 gtttgccctg cttgtggcag gggagaccaa gcccagttcc tcactctcca ttgggtccat
     5461 catctccaag tccccagtct gctccccagg accccagagt accggcttct tctccccagg
     5521 cctttctttg gggctcactg aggatagctt ccccatcgct ggggtttatg atacaaccac
     5581 agataacaag tgtagcatca aggcagctgt ggccaagaac atgctggatc ccatcactgg
     5641 gcagaagctg ttggaggccc aggcagccac aggaggcatc gtagatcttc tcagccgaga
     5701 acgatactcc gtacacaagg cagtggagca gggactcatt gagaacacct ccacccaacg
     5761 tctgctcaac gctcagaagg ccttcaccgg catcgaggac ccagtcacca ggaagaggct
     5821 gtcagtgggt gaggccatcc agaagggctg gatgccccag gaaagcgtgc ttccccacct
     5881 actggtgcag caccttactg ggggcctcat cgatcccaag aggacaggac gcatccccgt
     5941 ccctcaggct gtgctctgcg ggatgatcag cgaagaccta ggtcagctcc tgcaagacga
     6001 atccagctac gagaaggatt tgacagaccc catcaccaag gagaggctga gctacaagga
     6061 ggccatgggg cgctgccaca aagatcctct aagtggcctg ctacttctcc cagccatgct
     6121 ggaaggctac cgctgctacc gagtggcctc ccccaccctg cctcgctcct gtgtgcgttg
     6181 aggagggctc tgcaggaggg aagttagaat gcaggcgtgc accgccttgt cctggagcag
     6241 cataatccca ggcagcggtc ctcctcctgt ccatccacct cactgtgcag tcacttgtgt
     6301 tgggccctgt ccccaaacat gggaagctct gttatccctc ccaccccctg cttctaataa
     6361 atgaattatc ttggt
//
