LOCUS       XM_340966               2668 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus eva-1 homolog C (Eva1c), transcript
            variant X1, mRNA.
ACCESSION   XM_340966
VERSION     XM_340966.9
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051346.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_340966.10.
            
            On Jan 21, 2021 this sequence version replaced XM_340966.8.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2668
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2668
                     /gene="Eva1c"
                     /note="eva-1 homolog C; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 12 ESTs, 5 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 44 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:360695"
                     /db_xref="RGD:1307569"
     CDS             1135..2457
                     /gene="Eva1c"
                     /codon_start=1
                     /product="protein eva-1 homolog C isoform X1"
                     /protein_id="XP_340967.4"
                     /db_xref="GeneID:360695"
                     /db_xref="RGD:1307569"
                     /translation="MVLPGHPRLPPGPQPPQNPGLRRQVEPPGQLLRLFYCTVLVCSK
                     ETSALTDFSGYLTKLLQNHTAYACDGDYLNLQCPRHSTISVQSAFYGQDFQRCSPQEP
                     ISQREDNLTCVASTALQKVLDECQNQRACHLLVNSRVFGPDLCPGSSKYLLVSFKCQP
                     NELKNKTVCEDQELKLHCHGSKFLNIYSAAYGRRTQQTDICSSGAELLPPFDCLSYTA
                     SQVLSRRCYGKQRCKVLVDNYHFGSPCLPGVKKYLTVAYACVPKNILTAVDPAVANLN
                     PSLKKDDEYGIKFNPSGSRVVRKDGVIVSNSLAAFAYIRAHPERAALLFVSSVCIGLF
                     LTLCALVIRVSCTKDFQELRQGREHLVQGSDKAEEDSEEDVEEEDSSDSEFPVELSRF
                     CRTTYPAYSSIEAAELAERIERREQIIQEIWMNSGLDSSLPRNMGHFY"
ORIGIN      
        1 cctcccggcg gtggatgagg aacactttgt gccgagcgcc cgcccgccca gccctcctcc
       61 ttcccgccgg cgccgcgggg cctggatgcc tgcgctgttt gtaggtctgg ggtctcaaga
      121 agccgagtac ttagcacctg tcccgcagct ctggactccc actctttgtc cccgggtgtc
      181 ctcaccgatc tacgggtaga caccgcgcgt ggtcaacagg gtcatataga ttccgtggcc
      241 cattttaaaa caaagctcaa ttataagcgc tgttcattcc agcccagttt cagatccccg
      301 agggcgctgt caactagaac ccaccggaag ctccatcggg gcaaatagaa ccgggctcgt
      361 agcctcgtga tcaaccggtt tgaggctatc agctcgttca ggtccggact gctagaacct
      421 aggcagatct ctgtgtggtg gccagagagt tgaggaccca gtctcccatt tggtgcgatc
      481 ggacgtactg cgtgtttggt aactgaacat caatcgctga aggtggcagg gacagtaatg
      541 cctctatctc cgggaccccc atcttcccat aatctccgct cccctctggc caggactgta
      601 cgctgctgcg ttggttctaa agtgcgtcac ggacgggcac cggccgcgcc gctccaccgg
      661 cctgggtgag gttggcgccg ggccagcgca ggctgggcca gcagctcttg gccatcaccc
      721 cgcctagaga cccgggtgtg gaaagcgctc aagttgcgca gcatcgggat cgctgctgga
      781 gacgctctcc gctaggggct cggcgccccg gatcggcctc agcaatgctc cggggcacga
      841 ggtgacaccc cctagactct ctaggctctc taggcgcgtg gaaccaggga gatttcttca
      901 gaagaaacta cgcctcggcc tccctgggat cctcgccccg ccccaggtct ccgccccctc
      961 cccttggctt gggatccggg acccggtggc gaccgcctaa gaagctccag cagactggac
     1021 caggaggcgg cagggggctg ggagccggtg gctacggact cgccccgcca tgtgacgcga
     1081 tcctcctgcc tgcgatccca gcaccggcgc ccgcgcccag ccgcgccgcg catcatggtc
     1141 ttgcccggac acccgcgtct gccgcccggg ccacagccac cgcagaatcc cggcctccgc
     1201 aggcaggtag agcctccagg gcagcttctg cgcctcttct actgcacggt cctagtgtgc
     1261 tccaaagaga cctccgcgct caccgatttt tccggttact taaccaaact cctgcaaaac
     1321 cacaccgcct atgcctgtga cggggactat ttgaatctgc agtgtcctcg gcattcaaca
     1381 ataagtgtgc agtcggcatt ttatgggcaa gatttccaaa ggtgtagccc ccaggagccc
     1441 atctcccaga gggaagacaa cttgacctgt gtggcatcca ccgctttgca gaaggtgctg
     1501 gacgagtgcc agaaccagcg ggcctgccac ctcctggtca atagccgagt cttcggacct
     1561 gacctttgtc caggaagcag taaatacctc ctggtctcct ttaaatgcca acctaatgag
     1621 ttgaaaaaca aaacagtgtg tgaagaccag gaactgaagc ttcactgcca cgggtccaag
     1681 tttctcaaca tctactctgc cgcctacggc cggaggaccc agcagacaga catctgttcc
     1741 tccggggcgg agctgctgcc cccctttgac tgcctgtctt acacggcttc acaagtcctg
     1801 tccagaaggt gctacgggaa gcagagatgt aaggtcctcg tcgataatta ccacttcgga
     1861 agcccatgtc ttcccggagt gaaaaaatac ctcactgttg cctacgcgtg tgttcccaag
     1921 aacatactca cggcggttga cccagccgtt gctaacctaa atccctctct gaagaaagac
     1981 gatgaatacg gtataaaatt caacccaagc ggatcgaggg ttgtgcggaa agatggcgtt
     2041 attgtcagca actctctggc tgcgtttgct tacattcgag cccaccccga gagagctgct
     2101 ctgctgttcg tgtctagtgt ctgcatcggc ctgttcctca cactgtgtgc cctggtcatc
     2161 agagtgtcct gcaccaagga cttccaggag ctgaggcagg ggagggagca cctggtgcaa
     2221 gggagtgaca aggcggagga ggacagtgag gaggatgtgg aagaggagga ctcctcagat
     2281 tctgagtttc ctgtggaatt gtccaggttt tgtaggacta cgtatccagc ctatagctct
     2341 atagaagccg ctgagctggc agaaaggatt gagcgcaggg agcaaatcat tcaagaaata
     2401 tggatgaaca gtggcctaga ctcctcgctc cccaggaaca tgggccattt ctactgaaaa
     2461 ccagatgcat ctggataaga ttatactttc tgaagaagga aggatccaga atgcgctgtc
     2521 tccccaccct gtccagttct ggtccacttg taccttctat gaaggagaac ctgtcatgtc
     2581 atccgagatg ggtgaagccg gaaaggtgtc aaagggacac ctcactgttt acagcacacc
     2641 ctggaataaa ttgggaggaa gacgtgga
//
