LOCUS       NM_001108679            1142 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus eva-1 homolog B (Eva1b), transcript variant 1,
            mRNA.
ACCESSION   NM_001108679 XM_001057020 XM_001057137 XM_342915
VERSION     NM_001108679.3
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1142)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000005.1.
            
            On Jan 5, 2022 this sequence version replaced NM_001108679.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC167091.1, CO403293.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-158               JAXUCZ010000005.1  143711627-143711784
            159-1142            JAXUCZ010000005.1  143712011-143712994
FEATURES             Location/Qualifiers
     source          1..1142
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..1142
                     /gene="Eva1b"
                     /gene_synonym="Fam176b; RGD1308876"
                     /note="eva-1 homolog B"
                     /db_xref="GeneID:362597"
                     /db_xref="RGD:1308876"
     exon            1..158
                     /gene="Eva1b"
                     /gene_synonym="Fam176b; RGD1308876"
                     /inference="alignment:Splign:2.1.0"
     exon            159..1142
                     /gene="Eva1b"
                     /gene_synonym="Fam176b; RGD1308876"
                     /inference="alignment:Splign:2.1.0"
     CDS             258..935
                     /gene="Eva1b"
                     /gene_synonym="Fam176b; RGD1308876"
                     /note="isoform 1 is encoded by transcript variant 1;
                     family with sequence similarity 176, member B"
                     /codon_start=1
                     /product="protein eva-1 homolog B isoform 1"
                     /protein_id="NP_001102149.2"
                     /db_xref="GeneID:362597"
                     /db_xref="RGD:1308876"
                     /translation="MPREGTWSYSATALQPMRTSEVRARPGGTELVHHNPGSPPLPAA
                     HPVLAALPFLTPSLTRPWISPRWDDSSLSGPPVTSAPCSLANPESFGLYFVLGVCFGL
                     LLTLCLLVISISCAPRSRPRTPAPHRDPRSSTLEPEDEDDEDEDTMTRLGPDDTLQGQ
                     ELSTEPDGPLSVNVFTSAEELERAQRLEERERILREIWRTGQPDLLGSGTLGPGATAT
                     LGRMHYY"
ORIGIN      
        1 cctctttcct cggaggaaac tttccgcccg ctggtctgtc gcggtgtccg acagcaccgc
       61 cgcacgaacc cggtaaggcg gacggggcgg cccggccccg gtatatgcgg cgaccgggaa
      121 gacaccagtg ccggagccag gctgcgggac gctgacgggg tggagcagct acgggaggag
      181 cgagcgcctt gtgccctgga ggacctgacc tgggtaacct cgcaggctga caggcgagct
      241 gcgccacagc agcatggatg ccccgagaag ggacatggag ctactcagca acagccttgc
      301 agcctatgcg cacatccgag gtgagggcca ggcctggggg cacggagctc gtccatcata
      361 acccaggcag ccctccgctc ccagctgctc accctgtcct tgctgccctt ccgttcctta
      421 ccccaagcct aactagaccc tggatttctc ccagatggga tgactccagc ctgtcagggc
      481 cccctgtgac ctccgctccc tgctccctag ctaaccctga gagcttcggc ctctacttcg
      541 tgcttggcgt ctgcttcggc ctgctgctga ccctatgcct gctggtcatc agcatctcct
      601 gcgcacctcg ttcgcggccc cggacccctg ccccgcaccg ggaccctcgc agtagcaccc
      661 tagagccgga agacgaggac gacgaggatg aggacaccat gaccaggctg ggtccggatg
      721 acaccctgca gggccaggag ctgtccacag aacccgacgg gccccttagc gtcaatgtct
      781 tcacgtcagc agaggagcta gagcgggcac agcggctgga ggagcgtgaa cgaatcctgc
      841 gggagatctg gcgcactggg cagccagacc tgttgggcag cggcactctc gggcccggag
      901 ccacggccac gttgggccga atgcactatt actgacaccc ggtcccacag agtggggcca
      961 gagtactgga tacaggactg cctcagggct ttcaaactgc ctctgcccca actctcttgg
     1021 tgctattggg cattggatcg ccacctacta agcactcttc gtggggcagg tgtgggtggg
     1081 aacagaatgc cagctcccac cttttcccga taataatgac caatgaaagg taatctcagc
     1141 ga
//
