LOCUS       XM_343454               4604 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus extended synaptotagmin 3 (Esyt3),
            mRNA.
ACCESSION   XM_343454
VERSION     XM_343454.8
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_343454.9.
            
            On Jan 21, 2021 this sequence version replaced XM_343454.7.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4604
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4604
                     /gene="Esyt3"
                     /note="extended synaptotagmin 3; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 5 ESTs, 2 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     20 samples with support for all annotated introns"
                     /db_xref="GeneID:363120"
                     /db_xref="RGD:1561304"
     CDS             201..2873
                     /gene="Esyt3"
                     /codon_start=1
                     /product="extended synaptotagmin-3"
                     /protein_id="XP_343455.4"
                     /db_xref="GeneID:363120"
                     /db_xref="RGD:1561304"
                     /translation="MQPEESCAGSAPPGPDVPERRQRSPDPEPRLSGQLLPELYSFVA
                     RVLFYLAPVYLAGYLGLSVTWLLLGALLWMWWRRNRRGKLGRLEAAFEFLEHEREFIS
                     RELRGQHLPAWIHFPDVERVEWANKIITQIWPYLSMIMENKIREKLEPKIREKSIHLR
                     TFTFTKLYFGQKCPKVNGVKAHTDKCNRRKVTLDLQICYIGDCEISVELQKIRAGVNG
                     VQLQGTLRVILEPLLVDKPFIGAVTVFFLQKPHLQINWTGLTNLLDMPGINELSDSLL
                     EDLIAAHLVLPNRVTVPVKKGLDITSLRVPLPCGVIRVHLLEAKKLAQKDNFLGLGGK
                     SDPYAKVSIGLQQCRSRTVYKNLNPTWNEVFEFMVYEVPGQDLEVDLYDEDADRDDFL
                     GSLQISLGDVMKNRVVDEWFVLNDTTSGRLHLRLEWLSLLTDPEALENDSGLSTAILV
                     VFLENACNLPRNPFDYLNGEYRAKKLSRFVKNKASRDPSSYVKLSVGKKTFTSKTCPH
                     SKDPVWSQVFSFFVHSVAAEQLCLKVLDDELECALGVLEFPLCQILSCADLTLEQCFQ
                     LDHSGLDSLISMRLVLRFLRVGERELGSPYTGPDALKKGPLFVKKVDTNQGCKAPTLK
                     EDLTDVTSILNPASYIKGASKSTDNISVATKAPEPKPEPQETGLEPKGKDGATGLCES
                     LGRKKNPATTFLTVPGPHSPGPIKSPRPMSRPAFPFAWPLTRVAPSMSSLNSLASSCF
                     DLTDVSFNTESGDCRLRRLGEIQLTVRYVCLRHCLRVLVNGCRNLTPCTSSGADPYVR
                     IYLLPERRWASRKKTSVKQKTLEPLFDETFEFFVPMGEVQKRSLDVAVKNSRPLGSHR
                     RKELGKVLIDLSKQDLIKGFSQWYELTPDGQPRS"
ORIGIN      
        1 gctccacccg ctggctttat tcccggattc cgcagtcgtg ggctggtaga accgagctcc
       61 gagcttgaag aggctggcag tgcaggagct gcgaggctgc ggagtcctcg tgccttgagg
      121 acagatgtgc gcaggcatag ggggtgctcc tacctgagct ggggtgaagc ttttggagag
      181 gacaagacgg ccacagagag atgcagccgg aggagtcctg cgcggggagc gcgccccccg
      241 gtccagatgt cccagaaaga cgccagcgct cgccagaccc cgaaccgcgc ctgtccggcc
      301 agctactgcc cgagctctac agcttcgtgg cgcgcgtcct gttctacctg gcgccggtct
      361 acctggcggg ctacctggga ctcagcgtca cctggttgct gcttggagcc ctgctctgga
      421 tgtggtggcg ccggaaccgc cgcgggaagc tggggcgcct ggaggccgcc ttcgaattcc
      481 tggagcacga gcgcgagttc atcagccgcg agctgcgggg ccagcatttg ccagcctgga
      541 tacatttccc agatgtggag cgtgtggagt gggctaataa gatcatcacc cagatctggc
      601 cctatctaag catgatcatg gagaacaaga tccgggagaa actggagccc aagatccggg
      661 agaagagcat ccacctcagg accttcactt tcaccaagct ctactttggg cagaagtgtc
      721 ccaaggtgaa cggagtcaag gctcacacag acaaatgcaa ccggaggaaa gtgaccctgg
      781 acctgcagat ctgttatatc ggtgactgtg agatcagtgt ggagctgcag aagattcgtg
      841 caggtgtgaa cggtgtccag ttgcagggta ccctgcgtgt cattctggag cccctgctgg
      901 tggacaagcc tttcatagga gctgtgactg tgttcttcct tcaaaagccg cacctgcaga
      961 ttaactggac aggcttgacc aacctgctgg acatgccagg tatcaatgag ttatcagaca
     1021 gcctgctgga ggacctgatt gctgctcacc tggtgctgcc caaccgtgtg actgtgcccg
     1081 tgaagaaggg gctggatata accagcctgc gcgtccctct cccctgtggt gtgatcagag
     1141 tccatttgct ggaggccaag aagctggccc agaaggacaa cttcctaggg ctcggaggca
     1201 aatcagaccc ctacgccaag gtgagcattg gcttgcagca gtgccggagc agaaccgtat
     1261 acaagaacct gaaccccacc tggaatgaag tattcgagtt tatggtgtac gaggtgcctg
     1321 ggcaggatct ggaggtagac ctgtatgacg aggatgctga cagggatgac ttcctgggca
     1381 gcctgcagat cagccttgga gatgtcatga agaacagagt ggtggatgag tggtttgtcc
     1441 tgaatgacac gaccagtggg aggctgcacc tgaggctgga gtggctctca ctactcactg
     1501 acccagaagc gctggagaac gatagtggcc tctccactgc catcctcgtg gtcttcttag
     1561 aaaatgcctg caacctgccg agaaaccctt ttgactatct gaacggtgaa tatcgagcca
     1621 aaaaactctc caggtttgtc aaaaataagg ccagcagaga cccttcctca tatgtcaagc
     1681 tatctgtggg caagaagacc tttaccagta agacctgtcc ccacagcaag gaccccgtgt
     1741 ggagccaggt gttctccttc tttgtgcaca gcgtggcggc tgagcagctc tgcctcaagg
     1801 tgctggatga tgagctggag tgtgctctgg gggtgctgga gtttcccctg tgccagatcc
     1861 tctcctgtgc tgacctcacc cttgaacagt gcttccagct ggatcactca ggcctggaca
     1921 gcctcatctc catgaggctg gtgcttcggt tcttacgtgt gggggaacga gagctaggaa
     1981 gcccatacac cggacccgat gctctaaaaa aaggtcctct gttcgtcaag aaggtggaca
     2041 ccaaccaggg ttgtaaagcc ccaaccctga aagaagacct tacagatgtg acaagcatct
     2101 tgaaccctgc ctcttacatc aagggagcct ccaagagcac tgataacatc agtgtggcca
     2161 ccaaagcccc agaacctaag cctgagcccc aggagacagg cctggagccc aaaggcaagg
     2221 acggtgccac agggctctgt gagtccctgg gaaggaagaa gaacccagct actaccttcc
     2281 tgactgtccc aggcccgcac tcgccagggc ctatcaagtc acccagaccc atgagccgcc
     2341 ctgcctttcc attcgcatgg ccactcacga gggtggctcc cagcatgtcc tcactcaact
     2401 ccctggcctc ttcctgcttt gacttgacag atgtcagctt caacactgaa tctggggact
     2461 gcaggctgcg acggctgggt gagattcagc tcacagtgcg ctatgtgtgt cttcgacact
     2521 gtctcagggt gctagtcaac ggctgcagaa acttgacacc ctgcaccagc agtggcgctg
     2581 atccctatgt ccgcatctac ctgttgccag agaggagatg ggcgagtcgg aagaagacct
     2641 cggtaaagca gaagaccctg gaacccctat tcgatgagac gtttgaattt tttgttccca
     2701 tgggagaagt acagaagagg tcactggatg ttgcagtgaa aaacagtaga cctctcggct
     2761 cacacagaag gaaggagctg gggaaagtgc tgattgactt atcaaaacag gatctgatta
     2821 agggcttttc acagtggtat gaactgactc cagacggaca gcccagaagc tgacaatgac
     2881 ctcttatgtc ctgtgttaga aagtgaatct gtgtattttt gtcatttaaa tcagaacatt
     2941 tgaaggaagt atatattgta tgaactctta actacatgat actacatggg tagtagaaga
     3001 aggtcgtgta aaagcaggaa ctattcctgt taatttggat taattcaaat ccgcaaagaa
     3061 acggtggcat ttgtagctaa ggaggcacca aaacctcagt attgacttct cacgttggta
     3121 agtaacctgt gcctgtctcc aacacagggt tgtggcagag gaagcctgtt tagggcatgt
     3181 accagcagtc ctgggcaggt atcaaccaca ggagggcact cttttgtgaa ctaaaaagca
     3241 tccaaaaccc agagctacca ctgccaaagc cccccccctg gttgccccct gtgatgctgt
     3301 aagcctgcct tggccctggt tctgatttgg agctgtggtg tatgttccta ggggcaacag
     3361 tgctaagagt gatatcctta agtaaatgct ctgggaaagc cgaggcacaa acctctggta
     3421 tgcggcatta tttccatagg aaaatttgag cccagcccca aaacaaggtt cgtgtctgaa
     3481 ccctgggttc aggaggctac agcacagcca cctcctagga ggaatggtgg ggcctttttg
     3541 tatttctgtt aggcaagttt gagacttagt cctgctgttg taagaaactg atgggtctcc
     3601 caaatataca tgttaagagg aaaaaatatg gacactgtgt atttaagcaa gtgcctttta
     3661 cacatttcag tttgtaagac cagatagact tttgttctct gtgtttctag agtgacgatc
     3721 acccattcag accacactcc ctgtcatctt ctatagtgct tttccttttt attattattc
     3781 cgtgtaggat gtgagcaggt gcaaaacacc tatggataca taggttctgg gcgggcttgt
     3841 gcaacagatg acctttagcc atctccgatg ttcttctaaa gaatgctacc gagtgggcat
     3901 ggtggcaaat gtctttagtc ccagctctgg gaggctcagg caagtggctc tctgtgggtt
     3961 caggccagcc aaggctacaa agtatgactg actctcaaaa acaaaacaac aaaaattggc
     4021 aatgttctac tgggcatggt ggcccacacc ggtaatccca gcacttggag gccgaggtgg
     4081 cctgcctcaa caacacaact atagtgttca ctctgactta ctgtagggta tgtgttattt
     4141 attatagact gtaatattca tagctccaac tcacctatca agtgtgagct gtggtttctg
     4201 ctgctgctgt actcctgtgc agatgtgtgt ccattcagca gcatcctgag gatacaaaac
     4261 agtctacaca ctgtcgtctt ttccagtggc cagcccacac tggaagtggc cagtctcact
     4321 ttccagctta acaatgctca gtgtaggcag gtggatctct gagttcaaga ccatcctggt
     4381 cttcagagta agttctggga cagccaagac tacacagaga aaccctgtgt ccaaaaccag
     4441 aagccaattc ttagtgttgt aacattaatt ttttttaatg tttacactct gtctgttagg
     4501 cctcatacta agcaactaca atattttgtt tgataatgtt ttagtttata tcccagttga
     4561 accagactac ctgatgcata atacagattt tgtaaatatt tcta
//
