LOCUS       XM_017591359            7990 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus glutamate-rich 3 (Erich3), transcript
            variant X1, mRNA.
ACCESSION   XM_017591359
VERSION     XM_017591359.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017591359.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017591359.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7990
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..7990
                     /gene="Erich3"
                     /note="glutamate-rich 3; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 14
                     ESTs, and 100% coverage of the annotated genomic feature
                     by RNAseq alignments, including 26 samples with support
                     for all annotated introns"
                     /db_xref="GeneID:295528"
                     /db_xref="RGD:1593279"
     CDS             436..5010
                     /gene="Erich3"
                     /codon_start=1
                     /product="glutamate-rich protein 3 isoform X1"
                     /protein_id="XP_017446848.1"
                     /db_xref="GeneID:295528"
                     /db_xref="RGD:1593279"
                     /translation="MSHSHPAGLLATYNSLTDKHLAGYFNNTRIRRHLLRSGLITRSG
                     RILSEKEYKVNNMKQDHQKYIRECLARAIFHKVLDMERYRQLEIKRKLDDLARRERIQ
                     RLKGEHTRRFIEDNMPILTPHPPAGPKTNRGHSVLAEEGRSSPLTLTAPRPYTAPGNM
                     QPPVRLQPLLSNRQIRNGSKITSGSKPKTLLLESEAPFPLAGKKAMMKFRNYMDNSQK
                     EDLYQLPHINSYQIPVPPSPQPQAKSFRENRLEAWRRKRLRPITAPHGLEPLFTKDPG
                     RIYKTAPHSNAVITMVYFGKNVHVSYDDIDFRDEIKIYQQHCGGENLCVYKGKLLEKD
                     TFQFISKRHHGYPFSLTFYLNGIQVNRISSCCEFKHRRSSRLGGKRGYFGFVCVEKAS
                     PCYRCIIAMGLDRKPSSMKPKKDKIAEKKEESLKKNQGKLRKDRENAPSKRNEMERKE
                     SSVSAAFSAEEIKLGVKEVRTAIEEMEWKGRIGHSVWEEDQDNAVKYVFGHECRSTLT
                     VHFGADYEEDFEIDELKQDEKEDGEDQDDDQMSRGTKSPTEGEKDNLNPEKELETSSE
                     KALDARDSENFEDTGCSDSEEDDRQDLKTTSSISSRSHPYSSESEDESTEVGGEADSV
                     NSEGESSKSSSSQDLRENSDPGKLHFPAEEYLGTEIEEQEITKLDGDNGPWLTELSGT
                     HVTEEKPTKGSQALLESEPKESRQVASSEVRAKSELLKEAGLPWVEEVGQITGEAQKP
                     GHGRSTPPGPSPTDDGVTPMRKPEVNLDRVVEEKAVLSSNEQPVQAAQEMRTLKEEAM
                     EKDEPSQSEDTDASVGLREKAEMGEDGTCRPQDADMDGGPREKAGMLEDGTCHPQDAD
                     TDGGLREKAGISKVPLGERSPTGEQQASAEQVTETGQYPLRIASEVEAGTEGSRRHGE
                     EQLISIEKVAAGASVFLSVEQGVDRQRDEDPDRQASLQTGMEEGRTVSQGEQELEKAA
                     FTDSTGLSSETLGEAAILKEAGTSEVKEAEREMGSPKPDGDQGKEGALAELEVMGPVV
                     DTGPEREDGSEEAALGGERAARGRKEFLEAETPFSSSTGEPQASPWEDFPGNHEELSK
                     EDTAREGIITDTESTEERDVRAVFPGELAAAGGMEKAERPTPPLRETGSDREEETGAE
                     VLKTEDLLEHKVKGEEEGTVREVGFEEEACASSHETEADTENAEPTGATESGEVTKLP
                     EELPEERTITLFEATPQFEKSPEESAATNTEHQGGEELPGQESEAPWPQERGLSHDGE
                     GLLGAPGPEPADKAQGPEGIFTARGEEWAAEEPDSHVEPERLEENGPLQVQGGDIMRR
                     TQGNLPKERLTRAVVCREAEVEKPQGEGDGDKECSPGTETVGLIVQNWITGGSTVEAQ
                     EDPQEGEIEDSAEWREVSEESKSADGIPMASSSADAQQETWDRAGEALGETANEERTL
                     TEDMTPRAEKVAVVEEVTSAGAMAETQQEQAPEVQYSRPGEDREGGEAKASQHPGMAG
                     EETGATRKDEEHQTGAAGEFRGSVSQSETA"
ORIGIN      
        1 agctagaagt tgagccagaa agggtcctct gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt
       61 gtgtgtgtgt gtgtgttttc ttcatggttt aggtgcctgg ggaacggtaa ccccagagta
      121 actaagctgc agcctgctgg atctcctccc atatcggccc agtaagcagg gtggaagctg
      181 gcttcctttc cagcttgcct aggcttggtt ccagcagcac cgctgcttct cccagcccta
      241 ggtgctcgcc ttccctcctc ccttagcaac tgggagtctg tggacgccat caagtagcaa
      301 ccgggaggct gcagggagcc cgggtgagga agggcggagc ccagcccagg tgccccgaat
      361 ccccgccact gcagcgcaaa gccaccgcta gccgcatctg cacctgcagc ggggtccgaa
      421 aaggattctg caaaaatgag ccattctcac cccgctggat tacttgcaac atataatagc
      481 ctcacggata aacacctggc tggttatttt aacaatacca ggatcaggcg gcatctccta
      541 agatccgggc tgatcacgag aagtgggagg atactttctg aaaaggaata caaagttaac
      601 aacatgaaac aggatcacca aaaatacatc cgagagtgct tagcccgggc cattttccac
      661 aaggtccttg atatggagcg ctaccgtcag ctggaaataa aacggaagct ggatgactta
      721 gctcggagag agcgtattca gaggttgaag ggagaacaca caagacgatt tattgaagat
      781 aacatgccca ttctgactcc ccatccccca gccggcccaa agactaatcg tggccatagc
      841 gttctggctg aggaaggacg ttctagtcca ttaacactga cagcccctcg accgtatact
      901 gccccaggaa atatgcagcc tccggttcgt ctgcagcctc ttctcagtaa tcgccaaata
      961 aggaatggtt caaagataac ttcagggtcc aaacccaaaa ccttattgct ggaaagtgaa
     1021 gctccatttc ctctcgcggg caagaaggcc atgatgaaat tcaggaacta catggacaat
     1081 tcccagaagg aggatctcta ccaacttcca cacattaaca gttaccagat acctgttccc
     1141 ccgtcacccc agccccaagc aaagagcttt agggagaaca ggttggaggc ttggaggagg
     1201 aagagactgc gtcccatcac ggctccccat ggcctagagc ctctcttcac caaggatcca
     1261 ggaaggattt ataaaacagc accacatagc aatgcagtta tcacgatggt ctattttggt
     1321 aaaaatgtgc acgtatctta cgacgacata gacttccgag atgaaatcaa gatttatcaa
     1381 cagcactgtg gaggagagaa cctttgtgtc tacaaaggga aactgcttga gaaagacacc
     1441 tttcagttta tctccaagcg tcaccacggc taccccttca gcctcacctt ctatctgaat
     1501 gggattcagg tgaacaggat cagctcctgc tgtgagttca agcaccgcag gagctcccgc
     1561 ttgggaggca agagaggcta cttcgggttt gtgtgtgtgg agaaggcatc tccttgctac
     1621 aggtgcatta ttgcaatggg ccttgacaga aaaccatctt caatgaaacc taagaaggac
     1681 aagattgctg agaaaaagga ggagtcactg aagaagaatc aggggaaact gaggaaggac
     1741 agagagaatg caccatcgaa aaggaacgag atggagagga aagagtcctc tgtctcagcc
     1801 gcattttcag ctgaggaaat aaaattaggg gtcaaagaag tgaggacggc tatagaggaa
     1861 atggaatgga agggcaggat agggcatagc gtctgggaag aggaccagga caacgctgtt
     1921 aaatacgtct ttggacacga atgcaggagt acattgactg tccactttgg ggctgactac
     1981 gaagaagatt tcgaaataga tgagttaaaa caagatgaga aggaggacgg agaggaccag
     2041 gatgatgacc agatgagtag aggaaccaag tcacccaccg aaggtgaaaa agataatcta
     2101 aaccccgaaa aggagcttga aacctcttca gagaaggcac tagatgcccg tgacagtgag
     2161 aacttcgagg atactggatg ctcagacagc gaagaggatg acagacaaga cttgaaaacc
     2221 acgtcatcaa tctcatctag aagtcacccc tactctagtg agagtgaaga tgagtctacg
     2281 gaggtgggtg gggaagctga ctccgtaaac agcgaaggcg aaagttccaa aagttcctct
     2341 tctcaggatc tgcgggaaaa cagtgatcca gggaaattac actttccagc cgaggagtac
     2401 ttgggaactg agatcgaaga gcaagaaatc acaaaactgg atggggataa tggcccttgg
     2461 ttgacggagc tcagcggtac acatgttacc gaggagaaac caactaaggg aagccaggct
     2521 ttattggaga gtgaacccaa ggagtccagg caggttgctt cttcagaggt gagggctaag
     2581 agtgagctcc tgaaggaagc aggcctccct tgggtagaag aggtcggaca gataacaggt
     2641 gaagcccaga aacctggtca tggccgctct actccacctg gacctagtcc cacagatgat
     2701 ggggtgacac ccatgaggaa accagaggtc aacctggaca gagtggtaga ggaaaaagca
     2761 gtcctcagct caaatgagca acccgtgcaa gctgcacaag agatgcgcac actgaaggaa
     2821 gaagccatgg agaaagatga accttcccag tctgaggata ctgatgcctc tgtgggactg
     2881 agggagaaag ccgagatggg ggaagatggt acctgccgtc cccaggatgc tgacatggat
     2941 gggggaccga gggagaaagc agggatgttg gaggatggta cctgccatcc ccaggatgct
     3001 gacacggatg ggggactgag ggagaaagct gggatttcaa aggttccttt aggggagagg
     3061 agccctacag gagagcagca ggcatcagca gaacaggtca cagagacagg gcagtaccct
     3121 ctgcgcatag ctagtgaggt ggaggcaggc acggaaggga gtagaaggca tggggaggaa
     3181 cagttgatct ccatagaaaa ggtagcagca ggagcctctg tgtttctaag tgtagagcag
     3241 ggagtggaca gacagaggga tgaggacccg gacaggcagg cctcgctgca gacagggatg
     3301 gaggaaggaa gaacagtttc tcaaggggag caagaattgg agaaggcagc ctttacagac
     3361 agcacagggc ttagctcaga gactcttggg gaagcagcca ttctgaaaga agcagggact
     3421 tctgaagtga aggaagcaga gagggagatg ggctccccca aaccagatgg agaccaaggt
     3481 aaagaaggag ctcttgcaga gctggaggtc atggggcctg tggtggacac agggccagag
     3541 agagaggacg gttctgaaga ggcagcactt gggggagaga gagcagccag agggcggaag
     3601 gaatttctgg aagcagaaac tcccttcagc tcctcaacag gagagcccca agcaagcccc
     3661 tgggaggatt tcccaggcaa ccatgaggaa ctcagtaagg aagatacagc aagggaggga
     3721 atcatcactg acacagaatc caccgaggaa cgggatgtga gagccgtgtt ccctggggaa
     3781 ttagctgcgg ctggaggcat ggagaaagct gagaggccca caccacctct gagggaaact
     3841 ggatctgaca gagaagagga gacaggggct gaggtgctga agacagaaga cctgttagag
     3901 cacaaagtca aaggggaaga ggagggcaca gtgagggaag tgggttttga ggaagaggcc
     3961 tgtgcatcct cccatgagac ggaggctgat actgagaatg cagaacccac aggggcaact
     4021 gagtcggggg aggttacaaa gcttccggaa gagctacccg aagaaagaac cattactttg
     4081 tttgaagcaa cacctcagtt tgagaaatca ccggaagaga gtgcagccac aaacacagaa
     4141 catcaaggag gagaagagtt gccaggccag gagagcgagg ctccgtggcc tcaggagagg
     4201 gggctcagtc atgatggaga ggggctgtta ggagctcctg gacctgagcc agcagacaaa
     4261 gcacagggac cagagggtat tttcacagcc agaggtgaag agtgggctgc cgaggagccg
     4321 gacagccacg tggaaccgga gagactggag gaaaacgggc ctttgcaagt acaaggaggg
     4381 gacattatga gaaggaccca gggaaatctt cccaaggaaa ggctcaccag ggcagtggtc
     4441 tgtagagaag ccgaggttga gaagcctcag ggggaagggg acggggataa agagtgctct
     4501 ccagggacag agactgtcgg cctgatagtg cagaattgga tcacgggagg aagcacagtc
     4561 gaggctcagg aggatccaca agaaggagaa atcgaagact ctgcagagtg gagagaggtg
     4621 tcagaggaat cgaagtcagc tgatgggatc cctatggcct cctcctctgc agatgctcag
     4681 caggaaacgt gggacagagc aggtgaggct ctaggagaaa cagccaatga agaaaggacc
     4741 ttgactgaag acatgacgcc aagagcagag aaggtagcag tggtggagga agtgacatca
     4801 gcaggggcta tggcagagac ccaacaagaa caggctcctg aagtgcagta ctcaaggccg
     4861 ggggaggaca gagagggagg ggaagcaaag gcttctcagc acccaggtat ggctggggag
     4921 gaaacagggg ctacaagaaa ggacgaggaa caccaaaccg gagcagctgg cgagttcaga
     4981 ggatcagtgt ctcagtcaga gacagcttag ttagcagagt gtgtcgagag gcagcacctc
     5041 caaggaaact ggatttttct agagcccagg agagactgca agaagaactt gagagagcag
     5101 atgttccctt gaacacagct gagtaggagg tcccatggca gctggtgagc tccagtctgg
     5161 cgtgtttcca ggacatatag aaagcttgca tggctctcct gtctgtggtg cgggcttcac
     5221 tggtgtttcc tatgttctta tgtgttcttc agtttcgtac ttcttacccc caagctggcc
     5281 tgaagggtct tgtgaacacg gggaggcaat aaagcacgtg gaggaggtcg atcagctctc
     5341 tgtgtaaccc tttagtccta taaatgggtt ctcctgaaat gagatccgta tgtctcacag
     5401 gactcaagga caaaatacac aatatagaga gaagtcggac actgaggagc ttggggagga
     5461 gaaagaaata tatatttgta tgagaatttt aaaaggcata cagagaagaa tgtgccctca
     5521 gctgcagagc caagaaataa agggttaaaa gtcagttcag aattctcccc attagctttc
     5581 tttcatacac acatataaaa tccacaccct cgactgctcc caaatcacca ccagcgcttt
     5641 ggattttgaa ggatggacta aagctctctt gtggccattt aatcttacaa tgcttctata
     5701 cgtttatctc tgatgttttg ctaagtttaa taaatgtatg ttttccatgc atagatgaca
     5761 gatactgtac atatttaata tacactgttt gaaattccta agttttgaat ggtgtaagca
     5821 aacaccaaaa tatatttatt ttacagagtc tgttgtttcc aagatatcat caagtagcca
     5881 gcacatacat actaatattc tgagtgattt taccctcagt gtatcttttt tgttttccac
     5941 caggatattg tgaaactgtc atggttaaag acgtggagtg gggacagatg gaggcacgtt
     6001 gctccccagg agttcagagt ttcttttagc tcagtgctag cctgagccag tctcaactgt
     6061 agaccctggt tagtaggtta ctaatcgtgg tgaaatagct caagaaaatt tcccctcagg
     6121 ggaggtgtgg ccccaaacag agaatgaggg gaactgaaca ttctgcacat caaagtaatg
     6181 attgtttctc aaacatttga ctttcgccaa agtttatcag taggtgagcc ctgatggctt
     6241 gattttgttt aaaccacttt ttattcaata gttaagcatt agtctcaagt tcatgcatgg
     6301 ggatcatatt ttggaaattt gccatctctt ggaaaggtta acttttcctc tttacaactg
     6361 ggggttgggg aaggtaaagt gggaaccttc ctgaaaatgt cctttgaatg tgtttgtatc
     6421 tggttttctc tggtagagta gaaacgtgtg gctttcagca ttttgtccct gggagattgt
     6481 ccaccaggct gctcaaatgt aagtgagata tgtatgtaat ctaggtaagt gtgagaggag
     6541 tgtgatgacc agagtgggaa gacatggtcc ataacacaca ttctgggaag acgtggtctg
     6601 tcacacacac cctgagaaaa catggtccat caaacatact cagggaagac gtggtctatc
     6661 ctacgttctc tgaacctgat gtcaccctga agatcagcag cccacacacc ccagggttct
     6721 gttatttcaa acctgagtga ccccacagcc ctcggcaaga tagcagtcac aactgctctc
     6781 cagatgatac ccagatatca attccttgtt agctaccagc ctgctctgat gggctggatt
     6841 tccttgaaga cagtccacgc tccagagctc ccactattga cccctttctc aaagtgcgga
     6901 gatgaaaaat ttccaagaca gcaatttgcc agccaggagg agagacaacc ttttatgggg
     6961 cacttttatg agtgaactct tgccccataa aagcttcaga tatatctggt tctacatgaa
     7021 cctatgcatc aatatttcaa tttttcttga tcctattatg acgccaaaat tgaaaagtca
     7081 tattgtctgc cccctaaccc ccgtgttgct attgtctagg tgtcccgtta ttatagatgg
     7141 ttttaatttt gatgaacaat ggagctttgt gataattagt gatagacaga gccatccgta
     7201 ctggagcaga cctattggca cagagagtgg acagatcact tcatcgggga cgtcagtgca
     7261 ttgagcttac caccagcttc ttctcatact tagaaacggc atagagtgtt ggggggtggg
     7321 cagggtagaa agtgctgtta taggaaacct tggagtgatc ttaaagtgtt ccactgctca
     7381 ggtaggtcaa tggttaaaac agatctcatt ttggttgcaa agcagagggc aggagcactg
     7441 tcaggttcat ctctgcctct gtgtctttcc ttagtcgtgc gtgtggtcaa cctgaggaga
     7501 tgatagtcac cttaaacatg atgaagccac tcttatgtat tactgtgcgc aatgaacttg
     7561 gaagacttgc ccctccccac tgaataacaa gttgatggaa tcgggccaca gcctccctac
     7621 ccctcgccct ggtctgtggc tggctctcct ctactcctaa tctggttcca tgtgcactgt
     7681 gacctctaca ggacttgccc ttggtgttgc cccccccccc cccgagccac agagtacttt
     7741 aaacacagga ctgacgagaa agatagcaaa ctccttaatc actttgaaaa gtgagttttg
     7801 cgcgatgtgt taaatggaaa ttgccttgga ttatttttat atttaacacc ttccatcagc
     7861 ccagcctgta gtgtaattct acaatctgca tgtgggttta actgtgaaat tcggtgttgt
     7921 gatgttttga ttgagtaaaa ttttatctct gcaaatatta caccaataaa attatgctta
     7981 gcaaaactga
//
