LOCUS       NM_001191114            3451 bp    mRNA    linear   ROD 27-MAR-2024
DEFINITION  Rattus norvegicus ERI1 exoribonuclease family member 2 (Eri2),
            mRNA.
ACCESSION   NM_001191114 XM_001078485
VERSION     NM_001191114.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3451)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from JAXUCZ010000001.1.
            
            On Jul 17, 2010 this sequence version replaced XM_001078485.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360190.2311471.1,
                                           SRR26643296.2474.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-23                JAXUCZ010000001.1  183599964-183599986 c
            24-91               JAXUCZ010000001.1  183598522-183598589 c
            92-175              JAXUCZ010000001.1  183598356-183598439 c
            176-303             JAXUCZ010000001.1  183597266-183597393 c
            304-460             JAXUCZ010000001.1  183596596-183596752 c
            461-561             JAXUCZ010000001.1  183594115-183594215 c
            562-643             JAXUCZ010000001.1  183593775-183593856 c
            644-732             JAXUCZ010000001.1  183593115-183593203 c
            733-3451            JAXUCZ010000001.1  183590240-183592958 c
FEATURES             Location/Qualifiers
     source          1..3451
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q35"
     gene            1..3451
                     /gene="Eri2"
                     /gene_synonym="Exod1"
                     /note="ERI1 exoribonuclease family member 2"
                     /db_xref="GeneID:691484"
                     /db_xref="RGD:1583889"
     CDS             1..2064
                     /gene="Eri2"
                     /gene_synonym="Exod1"
                     /note="exonuclease domain containing 1; exoribonuclease 2;
                     exonuclease domain containing 1-like"
                     /codon_start=1
                     /product="ERI1 exoribonuclease 2"
                     /protein_id="NP_001178043.1"
                     /db_xref="GeneID:691484"
                     /db_xref="RGD:1583889"
                     /translation="MATKRLARQLGLIRRKSVTPASGNPGGSRFRQLYDYLIVVDFES
                     TCWNDGKHHSSPEIIEFPAVLLNTATGEIESEFHAYVQPQEHPILSEFCTELTGIKQV
                     QVDEGVPLKICLSQFCKWIHKLQQQKKISFATGDSEPSTPEVKPCAFVTWSDWDLGVC
                     LEYECKRKQLLKPVFLNSWIDLRATYKLFYNRKPKGLSGALQEVGIEFSGREHSGLDD
                     SRNTALLAWKMIRDGCLMKITRSLNKVLTKKNPKILARNLGLDQVEEASACNISIQDP
                     SINQKELQSTGNPQENAQMNSVCVNSCIKDQLQLKSNMKADLYNIKHSFPLFTTRCST
                     SVQQLCAPTLNPALYIQKPSKSEQLASSDRSKSSALDSNLVLVSTTIPSVNLVSDVEM
                     GHTFDCLPMLAEWEDVVLLPASQAEPDTDCMPPISDTNVDTSFNSAERSLVSEQPETL
                     SYENFDDLKETPQNSETSKSIVYKSPHSTVYNVKGAKHPGSDASAFKLPECKPFPFTS
                     VHANASSHPSVLRKQPLLSGGTKRNSFSPPVFPRAKKQTFAIHEEKSTSSLCSPGTTS
                     CKVPPSVLTSTVNLQEPWKTGKMTPPLCKCGRRSKRLIVSNNGPNHGKAFYCCPVGKY
                     QEDKKSCSYFKWEQTLQKERTNGKTLPHSSGLTFSSPDTSHIRDRSLNFPTKNSLRLR
                     PSMRN"
     exon            1..23
                     /gene="Eri2"
                     /gene_synonym="Exod1"
                     /inference="alignment:Splign:2.1.0"
     exon            24..91
                     /gene="Eri2"
                     /gene_synonym="Exod1"
                     /inference="alignment:Splign:2.1.0"
     exon            92..175
                     /gene="Eri2"
                     /gene_synonym="Exod1"
                     /inference="alignment:Splign:2.1.0"
     exon            176..303
                     /gene="Eri2"
                     /gene_synonym="Exod1"
                     /inference="alignment:Splign:2.1.0"
     exon            304..460
                     /gene="Eri2"
                     /gene_synonym="Exod1"
                     /inference="alignment:Splign:2.1.0"
     exon            461..561
                     /gene="Eri2"
                     /gene_synonym="Exod1"
                     /inference="alignment:Splign:2.1.0"
     exon            562..643
                     /gene="Eri2"
                     /gene_synonym="Exod1"
                     /inference="alignment:Splign:2.1.0"
     exon            644..732
                     /gene="Eri2"
                     /gene_synonym="Exod1"
                     /inference="alignment:Splign:2.1.0"
     exon            733..3451
                     /gene="Eri2"
                     /gene_synonym="Exod1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggcgacca agcggctggc acggcagctt ggattaatta ggagaaagtc agttacacca
       61 gcaagtggaa atccaggagg aagcagattc agacagctgt atgactactt aattgttgtt
      121 gattttgagt ctacctgctg gaatgacggg aagcaccaca gtagccctga aataattgaa
      181 tttccagcag ttttgttgaa tacagcgact ggagagatag aatctgagtt tcatgcttac
      241 gttcagcctc aagaacatcc aattctttct gaattttgca cagaattgac agggataaaa
      301 caggttcaag ttgatgaagg agtccccctg aagatctgct tatctcagtt ctgtaaatgg
      361 attcataagc ttcagcagca gaagaaaatc agtttcgcta ctggggactc agagccttct
      421 actcctgaag tgaagccctg tgcttttgtt acctggtcag actgggactt gggcgtttgt
      481 ctagagtatg agtgtaaaag aaagcagcta ttgaaacctg tgttcttaaa ttcttggatc
      541 gatctcagag caacttacaa gcttttttat aacagaaaac ccaaaggact aagtggtgcc
      601 ttgcaggaag tgggaataga attttcagga cgagaacatt ctggcttaga tgattctcgg
      661 aacactgctc ttcttgcttg gaaaatgatc agggatggtt gcctaatgaa aattaccagg
      721 tccttgaaca aggttctcac taagaagaat cccaagattt tggccagaaa tttgggttta
      781 gatcaagttg aagaagcatc tgcctgcaac attagcatcc aggatcccag cataaaccaa
      841 aaggagctcc aaagtacagg aaatccccag gaaaatgctc aaatgaattc agtttgtgtg
      901 aattcctgta taaaggacca attacaacta aaaagcaaca tgaaagcaga tctttacaat
      961 atcaaacata gctttcctct tttcactacc aggtgctcga catctgtgca acaactgtgt
     1021 gctcccacct tgaatccagc tctctatata cagaagccaa gtaaaagtga gcagcttgca
     1081 tcaagtgacc gctcaaagtc ctcagcactt gactccaact tggtgcttgt gtctacaacc
     1141 atcccgtctg ttaaccttgt ttctgatgta gaaatgggtc atacttttga ctgtttaccg
     1201 atgttggctg agtgggaaga tgtagtttta ctgccagcat ctcaggctga gccagacaca
     1261 gactgtatgc ctcctattag tgacacaaat gtggatactt catttaattc tgcagagagg
     1321 tcactggttt cagaacaacc agaaacactt agttatgaaa actttgacga ccttaaggaa
     1381 actcctcaaa attctgagac atctaagtct attgtgtata agagtcctca cagtacagtc
     1441 tataatgtaa agggagccaa acacccaggt tcagatgcct ctgcgtttaa gttacccgaa
     1501 tgcaaaccat ttcctttcac cagtgttcat gccaatgcat catcacatcc ttcagttttg
     1561 aggaaacaac ctcttctttc aggtggcact aaaagaaatt catttagtcc tccagtgttt
     1621 ccacgagcca aaaagcagac ctttgctatt catgaggaaa agtcaacgtc atctctctgc
     1681 tccccaggaa caacttcttg taaagttcct ccctctgtgt taacatccac agttaatcta
     1741 caagagcctt ggaagactgg aaagatgacc ccccctttat gcaagtgtgg cagaagatct
     1801 aagcggctta ttgtttctaa taatgggcca aaccatggga aagccttcta ttgttgccct
     1861 gttgggaaat accaagaaga caaaaaaagc tgtagttatt ttaaatggga acaaacactt
     1921 cagaaggaaa gaaccaatgg caaaactcta cctcattcct caggactcac tttcagctct
     1981 ccagacacaa gccacattcg tgacagaagt ttaaattttc ctactaaaaa ttctttacga
     2041 ctcagacctt caatgagaaa ttgataaact cttctaagct gtcttttact tcagtataag
     2101 ctttatctga cgttcacaca ggaaaaatag caataggctt tacattatgt agtctcagca
     2161 tatctgagca ctgcagctac tctggagcgg ctcaaacgaa cagaagggaa atggatgcac
     2221 tcttgccaag tagttgtctg tcaactatgg tctgttcatg tggcgatcct tgttcctaga
     2281 tgagcatttg ggtagtcata tatttcatac attaacattt gctgaattta tcaaactatc
     2341 ctaaagaact acaaggaaaa actattttta taaaccatat ttattaggtt aaatttaata
     2401 actaaccata gaatatgaca gctgtctctt atactttgac attgaaacaa atttcaaact
     2461 atttttaaat tacttgaata aaattatgac tagtaaaatt cctactcaac ttttaggtaa
     2521 gtattctaag aattatgaca gtttccttca aagcttgaag atttgttctg atttgtatat
     2581 tggcatatta gaattgttca gttaagtttt gaaaacccat ggggcagaga tttggtttag
     2641 aaacagctcc taaaataaat tttaaggcat cacggcatct gataacattc attttatgtt
     2701 gcaaattaca ggaacattga catgaaggca gaaggattca gtgattatat gatttcataa
     2761 ttcagcctat ggtttcattc tacaaaatag tttaaatcca atttaaaagc agtctgccca
     2821 cgtgatctgt ggttcctgta gactcagaga cactgtgttt acttgtagat atgcaggtga
     2881 ttagtgggcc aagtttaagt tgttgtccat tcctttctcc tcagttcatt tcttttgacc
     2941 ttcccactga cagtctttgg cagctcctca ataaattcta tctgttggta ttaaggggag
     3001 gaagaaatta gtccatcact tgtagacttc attcaggtca tgccagttac ccaatatctc
     3061 tgtttcaaat tctaggtaaa aggatgaagt tgggtttttg tttgtttgtt tgtttgtttt
     3121 gttacattaa tattatgagc taattgactg aattatgtta ggggcgtcac tttaacctca
     3181 gaattttttg attaactatt gtcattagct ctgtttggaa ccttttgcac agcatattta
     3241 aggagaaaga tcatttaaaa ggaaaaaaac aaatagaaaa atttccaaaa cactaaacaa
     3301 gtagcagttg taacaaggac acctaccttc ctggggtatt tgtaaggtgc tgtagtcttt
     3361 ttcacatgct cctgaatctc ttttttcagt tgttcttgat catggagttt gtaatcagga
     3421 tttaggacaa taaaggcctt tactacctaa a
//
