LOCUS       NM_001106749            1683 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus ergosterol biosynthesis 28 homolog (Erg28), mRNA.
ACCESSION   NM_001106749 XM_001057961 XM_216756
VERSION     NM_001106749.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1683)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473982.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001057961.1, XM_216756.4.
            
            ##Evidence-Data-START##
            CDS exon combination :: FQ212891.1, CA333744.1 [ECO:0000331]
            RNAseq introns       :: partial sample support SAMEA5756307,
                                    SAMEA5760389 [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1683
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q31"
     gene            1..1683
                     /gene="Erg28"
                     /gene_synonym="RGD1310769"
                     /note="ergosterol biosynthesis 28 homolog"
                     /db_xref="GeneID:299207"
                     /db_xref="RGD:1310769"
     exon            1..421
                     /gene="Erg28"
                     /gene_synonym="RGD1310769"
                     /inference="alignment:Splign:2.1.0"
     exon            422..557
                     /gene="Erg28"
                     /gene_synonym="RGD1310769"
                     /inference="alignment:Splign:2.1.0"
     exon            558..718
                     /gene="Erg28"
                     /gene_synonym="RGD1310769"
                     /inference="alignment:Splign:2.1.0"
     CDS             586..1008
                     /gene="Erg28"
                     /gene_synonym="RGD1310769"
                     /note="probable ergosterol biosynthetic protein 28"
                     /codon_start=1
                     /product="ergosterol biosynthetic protein 28 homolog"
                     /protein_id="NP_001100219.1"
                     /db_xref="GeneID:299207"
                     /db_xref="RGD:1310769"
                     /translation="MSRFLNVLRSWLVMVSIIAMGNTLQSFRDHTFLYEKLYTGKPNL
                     VNGLQARTFGIWTLLSSVIRCLCAIDIHNKTLYHITLWTFLLALGHFLSELFVFGTAA
                     PTVGVLAPLMVASFSILGMLVGLRYLEAEPVSRQKKRN"
     exon            719..809
                     /gene="Erg28"
                     /gene_synonym="RGD1310769"
                     /inference="alignment:Splign:2.1.0"
     exon            810..928
                     /gene="Erg28"
                     /gene_synonym="RGD1310769"
                     /inference="alignment:Splign:2.1.0"
     exon            929..1683
                     /gene="Erg28"
                     /gene_synonym="RGD1310769"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctcagctgcg ggcgcagacg gatggcgtca ccacggcgcg ctcagtcacc agagccaacc
       61 caggctgtca ccggaagatc tcttggctcc ttttctctct gtgttttccc cacccctaaa
      121 agactgactc caaactcaga gttccgccac gctcgacaga agggtttacc gcgtgagcgg
      181 cgcaacaggg aaaggctcag gcggcggcaa ctgctgattg gcagcaaagg ggttcactcc
      241 ctatcgcctg ctcgaactga accagcctag ccaatcagaa cgagaactga caaaaacgac
      301 ccaatcctgg agctgggctg agggaggggg cgggaacaag tggcccaggt ggacttggga
      361 cctcctggga agctgatttg cggatgcttc tgactctgct gcagtagtac tgggtcgtca
      421 gcttcctcaa aaaatcagaa cttcgctgcc cgtggcggca cccaccttta atcccagcac
      481 tcaggaggaa gaggcagatg gatctctgtg agttcgaggc cagcctggtc taggtagagt
      541 tccagactgg ccacatagca gagcgccctc tctttgaggg gagtcatgag ccgcttcctg
      601 aatgtgctac gaagctggct ggttatggtg tccatcatag ccatggggaa cacgctccag
      661 agcttccgag accacacttt tctctatgaa aagctctaca ctggcaaacc aaaccttgtg
      721 aatggcctcc aagcccggac ctttgggatc tggacgctgc tctcttcagt gattcgctgc
      781 ctctgtgcca ttgacatcca caacaaaaca ctctatcaca tcacactgtg gacattcctc
      841 cttgccctgg gacacttcct ctcggagttg tttgtatttg gaacagcggc tcccacagtt
      901 ggtgtgctgg cacccttgat ggtagcaagt ttctcaatcc tgggtatgct agttgggctc
      961 cggtacctag aagcagaacc agtatccaga cagaagaaaa gaaattgagg ccaaccttgc
     1021 cagctctgaa acatcatggt cttccacctt tgctctcttt attcaccctc tgtccttaaa
     1081 tcatttcctt ttggctgcat ccttagctcc ttctctaggt tcagcatctt aagcatttga
     1141 gagggttttt gttttttgat tttggggttt ttttatgttt ttaaattttt taaggtatta
     1201 ataagaaatt acataacatg tatgtataat ttagagtcat ttcaaaaata ctctgttaga
     1261 ccttcaaagt caaggaattt tgagaagctc cctaatgtgt cctcccccta gctataaccc
     1321 ctccaggctc cattttctgt tctttttgct ttttgttgtt tgtttctctg cattccttga
     1381 tttgacttgt gtggtgggag cagaaccgtg aaactgcagc tgctgcctgc ccagagcagc
     1441 tgcaagcaag ggctgcttca tggggctaag cacatatctg ggctcctttc tacgctggac
     1501 ccaagactcg gaaccagcca aggcacaggc agttcttctg agaagggctg ccctcgagca
     1561 ggaccaggct cctcttatct acaagtggat gaaggttgga agagtctggg ctgtttttag
     1621 acattttggt cagttgtttt tgtgtaatgc attttgtaat aaatagggaa accttctatt
     1681 ctg
//
