LOCUS       XM_039086748            4203 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus epsin 2 (Epn2), transcript variant
            X15, mRNA.
ACCESSION   XM_039086748
VERSION     XM_039086748.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039086748.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4203
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4203
                     /gene="Epn2"
                     /note="epsin 2; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 mRNAs, 51 ESTs, 4 long
                     SRA reads, 5 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 193
                     samples with support for all annotated introns"
                     /db_xref="GeneID:60443"
                     /db_xref="RGD:619773"
     CDS             314..2065
                     /gene="Epn2"
                     /codon_start=1
                     /product="epsin-2 isoform X4"
                     /protein_id="XP_038942676.1"
                     /db_xref="GeneID:60443"
                     /db_xref="RGD:619773"
                     /translation="MTTSSIRRQMKNIVNNYSEAEIKVREATSNDPWGPSSSLMTEIA
                     DLTYNVVAFSEIMSMVWKRLNDHGKNWRHVYKALTLLDYLIKTGSERVAQQCRENIFA
                     IQTLKDFQYIDRDGKDQGINVREKSKQLVALLKDEERLKVERVQALKTKERMAQVATG
                     VGSNQITFGRGSSQPNLSTSYSEQEYGKAGGSPASYHGSTSPRVSSELEQARPQTSGE
                     EELQLQLALAMSREVAEQEERLRRGDDLRLQMALEESRRDTVKVPKKKEVKACCKPGS
                     HSQQTTLLDLMDALPSSGPVAQKTEPWSTGTPANQTNPWGGTVAPANISDPWPSFGTK
                     PAASVDPWGVPTTASIQSVPKNSDPWAASQQPASDAGKTADAWGAAKPSPASGSFELF
                     SNFNGTVKDDFSEFDNLRTSKKPAESGASVPPQDSRTTSPDLFESQSLTSASSKPSSA
                     RKTPESFLGPNAALVNLDSLVTKPNPPAQSLNPFLAPGAAAPAPVNPFQVNQPQPLTL
                     NQLRGSPVLGSSASFGSGPGVETVAPMPSVAPHSALGATGSSLTPLGPTAMNMVGSVG
                     IPPSAAQPAGTTNPFLL"
ORIGIN      
        1 gcgcgcgcgc gctcgctgcc ggcgcgcccc ctctcggccg ccatgttggc tggcgtgtgg
       61 gtgtcaaacg ctgcacgggc tcgggtcgct cccgcctctc cagcgtcgcc ggcggctgca
      121 gccttgcact cgcgctggcc gggaacagag ggcatggctg ccagcttctg ggacctgagg
      181 ctttggagga agaaatgact gtggatggcc tttttgttcc atctgcgttt ctgacacgga
      241 aacttcctag ggtgcaggct taggggacag gaaagtttct cttgaagggc ttcacatttg
      301 taacaagata aaaatgacaa cttcatctat tagacggcag atgaaaaaca ttgtgaacaa
      361 ttactcagag gctgaaatca aagtccggga agccacctcc aatgacccat ggggcccatc
      421 cagctctctg atgactgaga ttgctgacct gacctataat gtggtagcct tctcggagat
      481 catgagcatg gtttggaagc ggcttaatga ccatggcaag aactggcgac atgtatacaa
      541 ggcgctgaca ctgctggact accttatcaa gacaggttct gagcgggtgg cccagcagtg
      601 tcgggagaac atctttgcta tacagactct gaaggacttc cagtacattg accgtgatgg
      661 caaggaccag ggtattaatg ttcgagagaa gtcaaagcaa ctggttgctc tcctcaagga
      721 tgaggagcgg ctgaaggttg agagggttca ggctctcaaa accaaagagc gcatggctca
      781 ggtggccact ggtgtgggca gcaaccagat caccttcggt cgaggctcca gccagcccaa
      841 cctttctacc agctactcag agcaagagta tggcaaggct gggggctcgc cggcgtccta
      901 ccacggctct acttccccac gagtgtcctc tgagttggag caggcccggc cacagaccag
      961 cggagaagag gagctgcagc tgcaactggc acttgccatg agcagagagg ttgcagaaca
     1021 ggaagaacgc ctcaggcggg gtgatgacct caggttgcag atggctctgg aagaaagccg
     1081 gagagacaca gtaaaagttc caaaaaagaa agaggtgaaa gcttgctgca agccaggctc
     1141 ccactcgcag cagactacct tgttggattt aatggatgcc ctccccagct caggccctgt
     1201 tgcacagaaa actgagccgt ggagtacggg aacccctgcc aaccagacca acccctgggg
     1261 tggaaccgtg gcacctgcga acatttctga cccctggcct tcatttggta ccaagccagc
     1321 tgcctctgtg gacccctggg gagtacctac cacagccagc atacagtctg tccccaagaa
     1381 ctcagaccct tgggcagcct cacagcagcc tgcctccgat gctggaaaaa cagctgatgc
     1441 ctggggggct gccaagccta gtcctgcctc agggtccttt gagctcttca gtaatttcaa
     1501 cggtacagtt aaagacgatt tttctgaatt cgacaacctt cgaacttcaa aaaaaccagc
     1561 tgagtcaggg gcctcagtac caccccagga cagcagaacc acgagccctg acctctttga
     1621 gtctcaatcc ttgacttctg cctcgagcaa gcctagcagt gctcggaaaa cacctgagtc
     1681 cttcctgggc cccaatgcag cactggtgaa cctggactca ctggtgacta agcctaatcc
     1741 accagctcag tccctcaatc ccttcctggc accaggtgct gctgctccag ctcctgtcaa
     1801 tccctttcag gtcaaccagc cccagccact gacactgaac cagcttcggg gaagccctgt
     1861 cctgggaagc agtgcgtcct ttgggtctgg tccaggggtg gagacggtgg ctcccatgcc
     1921 ctctgtagct ccacactcag cactgggggc cactggctcc tcattgacac cactaggccc
     1981 tacagcaatg aacatggtag gcagtgtggg tattccccca tcagcagctc agccagcggg
     2041 cacaaccaac cctttccttc tctagtgccc cgtggggact tgcctgagtg aacacccaga
     2101 gtgctgggcc aaggacgtca agtggggact cactctgatt tgtgtagtgg ctgagaatat
     2161 ggtggtaggg gtattagagc ttcaggtcca gcttcctggt gaaagggtgg ttgttacaat
     2221 ccagacttta gggtggcctc actgtcctag tcagacccct gggtgtcttc ctgagtgctc
     2281 agttcctcta aggtctggaa aggaggtatt tatcagtgtt gctcaagatt ctgggatgct
     2341 gtctagccca gaatttggga cagtcacatt gtgtgtgtct tgcccacccc agttatcttc
     2401 agggtgcgga caaggtgaag ctctgactcc atttgacact gaccgttggg aagtggttgt
     2461 gcatatttta ttttcctttg actcaatgtg agttcaaggt aaacactact accagtgtgg
     2521 agctttaagc tgactggagc gcgaccctgc cctatggctc tgtgcttgtg cacgtttgca
     2581 cattttgttg agtacagttt catatttgag tttgcaaaat tatctaatag tctttttttg
     2641 gctaatattt ttataacgtg gttcttattt aactgtctag ttttgataga attgaccaag
     2701 tctggctgaa ttaaggtctt ggcatgtatt attttagtgg tctaatttct cttatttatg
     2761 gttttaactg taagaagact ttaaaagaag agatatttgg atgacaaaat atgccttatg
     2821 gaaaactaag caaaattctt tatagcaaaa aaaccgggaa tttgattata caaaaagaat
     2881 tttattaaaa caagacaaaa acatccaaca ataacgaaac ccgtagcctc tagttgcctt
     2941 tttcctttct tcagctcttt tgatgaatta ccaaatcaat tgacttcagc attttaccta
     3001 gatctgagag gcttttttgc tactagtata ttgacatctt aaggttaaaa ggaaaaacaa
     3061 cgcatgattg tgacttgcca gtttttatca actaatccct tttttgtacc tgggatgcag
     3121 gggttgccag ggacttctgt ttactgcaga ccagaagtgt ggctggctgc cctgccatca
     3181 tgctcaggtt aatgagattg tgtgaaaatg gaggtgactc tacacttgtg ggctcagagg
     3241 tcaccacgga tggtccccct agctgagtca tgacagggac tggccctgat ttgtcttcct
     3301 gccagctcca actcaggcta ctgaccagga agtaaccgta tcctattttg gagaagaaaa
     3361 agtcctcagg tggcatagat ttaacatact gcactgatac taccctttct ctcccaacct
     3421 cctgctgtcc tcactcctca ccctcaagga aagtattaaa tcttgaattg catttcttca
     3481 aaggaaggac tgccccttat tggtcctggc agtttgtgtg tctttcctgc aatatggaat
     3541 tttaacctta agctccaagg acacccagcc acctgccagt tcctctctgc atccagagaa
     3601 agttttgacc ctcagcaccc acatagttga ctgagtgatt actgtttgag agaggactgc
     3661 acttaggccc ctcctgagtc tgagtctaca tgctgttcct aggccccaca agccaagggc
     3721 ccttcctaac taccctttcc acccaggacc caaggcctag ggagaggctt gggctctgct
     3781 gttcaggaag gctgagctga tggctgcctg ggagagatgg aggtatcaca gggcagggag
     3841 gccaggcacc agtccagact gcttccttca gatggtatag gctagggcca gaactgcctg
     3901 ctgtgggccc gtgattctgc tccagaagac aagagcccat ctgactggat ccccatccca
     3961 gtagccattg ggctcttcct cccacaggcc acccagcgca tgtccctgtt acccgctgca
     4021 ctgatcatga agccgctggc cactgccatg tgtgttgcac acgtgccacc atgcccttct
     4081 tgatgaatac cctgaaggaa gtcaccccgc tgcttctcag tcccagggct ggtgggtggt
     4141 tttggatttg tgttgactgt tgatacttta ctgtataaat ataatttatc atttgtatca
     4201 tga
//
