LOCUS       NM_001395095            6284 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus EPH receptor A10 (Epha10), mRNA.
ACCESSION   NM_001395095 XM_006238858
VERSION     NM_001395095.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 6284)
  AUTHORS   Aasheim,H.C., Patzke,S., Hjorthaug,H.S. and Finne,E.F.
  TITLE     Characterization of a novel Eph receptor tyrosine kinase, EphA10,
            expressed in testis
  JOURNAL   Biochim Biophys Acta 1723 (1-3), 1-7 (2005)
   PUBMED   15777695
  REMARK    Review article
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000005.1.
            
            On Jun 3, 2021 this sequence version replaced XM_006238858.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643298.28876.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760393, SAMEA5760433
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1224              JAXUCZ010000005.1  142424296-142425519
            1225-1289           JAXUCZ010000005.1  142427432-142427496
            1290-1968           JAXUCZ010000005.1  142429148-142429826
            1969-2124           JAXUCZ010000005.1  142438253-142438408
            2125-2475           JAXUCZ010000005.1  142438854-142439204
            2476-2609           JAXUCZ010000005.1  142444066-142444199
            2610-2781           JAXUCZ010000005.1  142446487-142446658
            2782-2890           JAXUCZ010000005.1  142449453-142449561
            2891-2949           JAXUCZ010000005.1  142454407-142454465
            2950-3075           JAXUCZ010000005.1  142454584-142454709
            3076-3261           JAXUCZ010000005.1  142455485-142455670
            3262-3323           JAXUCZ010000005.1  142456097-142456158
            3324-3527           JAXUCZ010000005.1  142456369-142456572
            3528-3677           JAXUCZ010000005.1  142456839-142456988
            3678-3871           JAXUCZ010000005.1  142457151-142457344
            3872-4027           JAXUCZ010000005.1  142457712-142457867
            4028-6284           JAXUCZ010000005.1  142458049-142460305
FEATURES             Location/Qualifiers
     source          1..6284
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..6284
                     /gene="Epha10"
                     /gene_synonym="RGD1562679"
                     /note="EPH receptor A10"
                     /db_xref="GeneID:298528"
                     /db_xref="RGD:1562679"
     exon            1..1224
                     /gene="Epha10"
                     /gene_synonym="RGD1562679"
                     /inference="alignment:Splign:2.1.0"
     CDS             1119..4142
                     /gene="Epha10"
                     /gene_synonym="RGD1562679"
                     /EC_number="2.7.10.1"
                     /note="ephrin type-A receptor 10"
                     /codon_start=1
                     /product="ephrin type-A receptor 10 precursor"
                     /protein_id="NP_001382024.1"
                     /db_xref="GeneID:298528"
                     /db_xref="RGD:1562679"
                     /translation="METGAGPHPLRLFVCLMPLCLALLLGPGRPGTAEEVTLLDSKAS
                     QAELGWTALPSTGWEEISGVDEHDRPIRTYQVCNVLEPNQDNWLQTGWISRGRGQRIF
                     VELQFTLRDCSSIPGATGTCKETFNAYYLETEADLGRGHPHLGGNRPRKIDTIAADES
                     FTQGDLGERKMKLNTEVREIGPLSRQGFHLAFQDVGACVALVSVRVYYKQCRATVRGL
                     AAFPATAAESAFSTLVEVAGTCVAHSEGEPSSPPRMHCGADGEWLVPVGRCSCSAGFQ
                     ERGDICEACPPGFYKVSPRRPLCSPCPEHSLALENASTFCVCQDTYARSPTDPPSASC
                     TRPPSAPRDLQYSLSRSPLALRLRWLPPEDSGGRSDVTYSLLCLRCGRDGPAGACQPC
                     GPRVAFVPRQAGLRERAATLLHLRPGARYTVRVAALNGVSGPAAAAGATYAQVTVSTG
                     PGAPWEEDEIRRDRVEPQSVSLSWREPVPAGASGTNRTEYEIRYYEKGQSEQTYSTVK
                     TGAPAVTVTNLKPATRYVFQIRAASPGPSWEAQSFSPSIEVQTPGEVAPGSRDQSPAV
                     VVTVVTISALLVLGSVMSVLAIWRRPCDGKGSGNAHDEEELYFHFKVPTRRTFLDPQS
                     CGDPLQAVHLFAKELDAKSVTLEKSLGAGRFGDLCCGCLQLPGRQELPVAVHTLREGC
                     SDSQKLSFLAEALTLGQFDHSHIVRLEGVVTRGNPLMIVTEYMNLGALDDFLRHHEAE
                     LVTAQLMGLLPGLASAMKYLSEMGYVHRGLAARRVLLSSGLICKISGFGRGPRDRAEA
                     VYTTMSGRSPALWAAPETLQFGHFSSASDVWSFGIVMWEVMAFGERPYWDMSGQDVIK
                     AVEDGFRLPPPRNCPSQLHRLMLECWQKDPGERPRFSQIHSILSKMGQEPEPSKCAST
                     TCLRPPTPLADRAFSAFPSFGSVGAWLEALDLCRYKDNFSAAGYGSLEAVTEMTAQDL
                     GSLGISSAEHREALLSGISALQTRVLQLQGQGVQV"
     exon            1225..1289
                     /gene="Epha10"
                     /gene_synonym="RGD1562679"
                     /inference="alignment:Splign:2.1.0"
     exon            1290..1968
                     /gene="Epha10"
                     /gene_synonym="RGD1562679"
                     /inference="alignment:Splign:2.1.0"
     exon            1969..2124
                     /gene="Epha10"
                     /gene_synonym="RGD1562679"
                     /inference="alignment:Splign:2.1.0"
     exon            2125..2475
                     /gene="Epha10"
                     /gene_synonym="RGD1562679"
                     /inference="alignment:Splign:2.1.0"
     exon            2476..2609
                     /gene="Epha10"
                     /gene_synonym="RGD1562679"
                     /inference="alignment:Splign:2.1.0"
     exon            2610..2781
                     /gene="Epha10"
                     /gene_synonym="RGD1562679"
                     /inference="alignment:Splign:2.1.0"
     exon            2782..2890
                     /gene="Epha10"
                     /gene_synonym="RGD1562679"
                     /inference="alignment:Splign:2.1.0"
     exon            2891..2949
                     /gene="Epha10"
                     /gene_synonym="RGD1562679"
                     /inference="alignment:Splign:2.1.0"
     exon            2950..3075
                     /gene="Epha10"
                     /gene_synonym="RGD1562679"
                     /inference="alignment:Splign:2.1.0"
     exon            3076..3261
                     /gene="Epha10"
                     /gene_synonym="RGD1562679"
                     /inference="alignment:Splign:2.1.0"
     exon            3262..3323
                     /gene="Epha10"
                     /gene_synonym="RGD1562679"
                     /inference="alignment:Splign:2.1.0"
     exon            3324..3527
                     /gene="Epha10"
                     /gene_synonym="RGD1562679"
                     /inference="alignment:Splign:2.1.0"
     exon            3528..3677
                     /gene="Epha10"
                     /gene_synonym="RGD1562679"
                     /inference="alignment:Splign:2.1.0"
     exon            3678..3871
                     /gene="Epha10"
                     /gene_synonym="RGD1562679"
                     /inference="alignment:Splign:2.1.0"
     exon            3872..4027
                     /gene="Epha10"
                     /gene_synonym="RGD1562679"
                     /inference="alignment:Splign:2.1.0"
     exon            4028..6284
                     /gene="Epha10"
                     /gene_synonym="RGD1562679"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctcaaatggt gccgctcagc tgcttccttc attctggagg ccccagacct caccaccccc
       61 accagatggt taaaccttca gcttgcaata agtgaccttc attaaataga ggtcgtgtcc
      121 cacgtttcct tgcggcttct tcagctccag ctgaactctt cgaggactgc tccgcctctt
      181 tcacagagac ctcagattcc aggtctgcat ttctcatcat tctcccgggg agctcagagg
      241 agaaccccag cctgagcata ccgtggccag aggttgtggg gtatgctgct tgtgtgtctg
      301 gacagcagaa gcaagaacct gggaagcgga ttgttggtac aaaaatctgc cactgcccgc
      361 atctcagcgt ccacatggtt tcccagcata ggaagcagtg ctggtagggt gggaccctgt
      421 ctccgatttg actctttccc caagcagctt ctggaatcgg ccaccgtgtg tgtgtgtgtg
      481 tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgatgagggc gggaggaaaa ggaggaggga
      541 tcgaaccatg caacactggg agccgcagac acaggaagag gccaagggct gggagacacc
      601 agaactccct agagcttgag gtcaggatat caagctcgga aaccccctgc aagtaatggg
      661 aacaagggtg ctcccaaggc tagctaagag gctgcaagtg tcaccgcttc cccgcggacc
      721 gcccccccgt aagccacgcc cacagcgcct acttctcagg attcagagag ctaaggttta
      781 agggtctcta gtccaccgac gccagcttgt ctcgctctcc ggcaaccctg ctaacgctca
      841 gagccgccct acccccacgg tttggagatc tgcgggaccc cttggtttcc ccctccagct
      901 cggcgttccg cccctggcct atgaaactcc accttctcat cctctgctga cccggattgg
      961 tggacctccc gcggcgatgc gtagcgattg gtccccatgg atgatggtga ccagcgagac
     1021 tccgccccag ccggcgctgg ggtctggggg cactgctcag cggtgctggg ctggcgaggc
     1081 tggagccgcc gccgcactga cagctccgtc tgtggaccat ggagactggc gccggtccac
     1141 acccgctgcg cctgttcgtc tgcctgatgc cactctgtct tgctctgctt ctgggacccg
     1201 ggcggcctgg gaccgccgag gaagttaccc tcctggactc caaagcctct caggctgagc
     1261 tgggctggac tgcactgcca agcactgggt gggaggagat tagtggcgtg gatgaacatg
     1321 atcgtcccat ccgcacgtac caagtgtgca acgtgttgga gcccaaccag gacaactggc
     1381 ttcagactgg ctggatcagc cgtggccgtg ggcagcgcat cttcgtggag ctgcagttca
     1441 cgctgcgtga ctgcagcagc atacctggcg ccactggcac ctgcaaagag accttcaacg
     1501 catactacct ggaaaccgag gccgacttag gccgaggaca tccccaccta ggaggcaacc
     1561 gaccccgcaa gattgacacc atcgcagctg atgagagctt cacgcagggc gacttggggg
     1621 agcgaaagat gaagctgaac acagaggtgc gtgagattgg ccccctcagc cgtcaaggct
     1681 tccacctggc cttccaggac gtgggtgcat gcgtggcgtt ggtctcagtg cgtgtctact
     1741 acaagcagtg ccgtgccaca gtgcgaggct tggcagcctt ccccgccacc gcagctgaga
     1801 gcgccttctc cacgctggtg gaagtggctg gaacgtgcgt ggcccactcg gaaggggagc
     1861 ccagcagccc tccacgcatg cactgtggcg cggatggcga gtggctggtg cctgtgggcc
     1921 gttgcagctg cagtgcagga ttccaggaac gtggtgacat ctgcgaagcc tgtcccccag
     1981 gtttttacaa ggtgtcccca aggcggcccc tctgctcacc ctgcccggag cacagcttgg
     2041 ccctggagaa tgcctctaca ttctgtgtgt gccaggacac ctatgctcgc tcgcccaccg
     2101 acccgccctc agcttcctgc actcggccgc cgtccgcgcc gcgggacctg cagtacagcc
     2161 tgagccgttc cccgctggcg ctgcggctgc gctggctgcc gcctgaggac tccggtggcc
     2221 gctccgacgt cacctactcg ctgctgtgcc tgcgctgcgg gcgcgacggt ccggcgggcg
     2281 cgtgccaacc ctgcgggccg cgcgtggcct tcgtcccgcg ccaggctggg ctacgggaac
     2341 gcgccgccac gctactgcac ctgcggccgg gcgcgcgcta caccgtgcgc gtggccgcgc
     2401 tcaacggcgt ctcgggcccg gcggctgccg cgggagccac ttatgcgcag gtcaccgtgt
     2461 ccaccggacc cggggcaccc tgggaggagg atgaaatccg tagggaccgc gtggagcccc
     2521 agagcgtgtc gctgtcgtgg agagagcctg tccctgctgg agcttccgga accaacagga
     2581 ctgagtatga gatccgctac tacgagaagg gtcagagtga gcagacttac tccacagtga
     2641 agactggggc accggctgtc actgtcacca acctgaagcc agctaccaga tacgtttttc
     2701 agatccgggc agcctcccca gggccttcct gggaggccca gagcttcagt ccaagcatcg
     2761 aagtgcagac cccaggggaa gttgcccctg ggtccagaga ccagagccca gcagtggttg
     2821 tcactgtggt gaccatctca gccctcttgg tcctgggctc cgtgatgagt gtactggcca
     2881 tctggaggag gccctgtgat ggcaaaggaa gtggcaacgc ccatgatgaa gaggaactgt
     2941 atttccactt caaagttccg acacgccgca cgtttctgga cccccaaagc tgcggggacc
     3001 cgttgcaggc tgtgcatttg tttgccaaag agctagatgc caaaagcgtc accctggaga
     3061 agagcttggg agcaggccga tttggggacc tgtgctgcgg ctgcctgcag ctgccgggtc
     3121 gccaggaact acccgtggcc gtgcacactc tgagggaggg ttgctcagac tcccagaagc
     3181 tcagcttcct ggctgaggcc ctcaccctgg gacagtttga ccacagccac atcgtgcggc
     3241 tggaaggcgt ggtcacccga gggaacccct tgatgattgt caccgagtac atgaacctcg
     3301 gggccctaga tgacttcctc aggcatcacg aggcagagct ggtgactgcg cagctgatgg
     3361 gtctgctgcc cgggctggca tcggccatga agtatctgtc ggaaatgggc tatgtccacc
     3421 ggggcctcgc ggcccgccga gtgctcctca gcagtggcct catctgtaag atctctggct
     3481 ttgggcgggg tccccgggac cgagcggaag ctgtctacac caccatgagt ggcaggagcc
     3541 cagcgctctg ggcagctcct gagactctac agtttggcca cttcagctct gccagtgacg
     3601 tgtggagctt tggcattgtc atgtgggaag tgatggcctt tggggagcgg ccctactggg
     3661 acatgtctgg acaagatgta atcaaggccg tggaggatgg tttccggctg ccacccccca
     3721 gaaactgtcc ctcccagctg caccgattga tgcttgagtg ctggcagaaa gacccaggtg
     3781 agcggcccag gttctcccag atccacagca tcctgagcaa gatggggcag gagccagaac
     3841 cctccaagtg tgcctcgacc acctgtctca ggcctcccac cccactggca gaccgtgcct
     3901 tttctgcctt cccctccttt ggctccgtgg gtgcctggct ggaggcccta gacttgtgtc
     3961 gctacaagga caacttctct gcagccggct atgggagcct ggaggccgtg acagagatga
     4021 ctgcccagga cctggggagc cttgggatct cttctgcgga gcatcgagag gccctcctta
     4081 gtgggatcag tgccctgcag actcgagtgc tacaactaca gggtcagggg gtgcaagtgt
     4141 gagccgctca gccctgcccc aggacctaca agcgacactc ccctagggtg ggaggagtgc
     4201 ttattctcag tggcctctga gctggttggt accacgttgt ccccccattt catttttcct
     4261 ctcaacacct tgctgaccta gtggtcctaa aacgaggttc agatccctgg agagggcccc
     4321 agacataaca gtaggaagag ggctagggtg tcaagggaag gttggggtgt caagggtgtt
     4381 ggttggggaa gacagtttca gttgtcctgg ctcaggcccc ttagactccc acactcagtg
     4441 ggggttgggc ctaatcagtg ggcatctcat ttctccagag agcttttgac ttgggcaata
     4501 tgggtccctg tgagagaccc attgtttctg acagggacca tagctgcgta ggcaccagag
     4561 tatgggagcc tgagccagtg ggtggtgccc cttacatcct gtgccttggc taggtctatc
     4621 tgcacactgg tgacaaggcc ctagcaggca agtggtgctg agctcaggga ctgggcctcc
     4681 aggtggagac tccagagctg atggcttcct gccttggggt tggcagttca ggatgagggc
     4741 caggctccta gtaggtcatg caaagtcctg gtgctcgccc tgggccgatg tctgatttga
     4801 ttggaagtga tttcagaaga gcacagcggg cttactctgc attctggagg gtggaaagga
     4861 gaatgagact gagggagtgg ataggctggt ccaatcacac tatatacttg gggaagtcag
     4921 agcccgtata gtctcagagc cagggttaat gccagaccga aatccaggga gaagtctggc
     4981 cctcaagaga gcttgccctg ccccatggca ccagcattcc tccctgggcg gcacagtgaa
     5041 tggtccctgg gttgaacccc ttcaggccgc tctgtccctc aacactagag tacagttccc
     5101 ctccagagtg cctccctgtg tgctgttcag agctcttgaa ggtgctaagc aaggaccctg
     5161 gcagctgttg agaccttgag accaaagcca tcccagaggg cagaaaggca tggatgtgta
     5221 caggacctgg ggctgtttgt ctacatgacc cctgatggat gcctgtttgc tatggtaggg
     5281 aggaagggtg gcataggctt gagacagagt aggtgggagt ggagaggagt aggcaggata
     5341 cagagagtac ctctggaggg agcacactag gaggggatcc cctggggcac aggggaaatg
     5401 ggcaggtgga ctgtggatta tgtttgtgta gtggggggtg tccaaaaagg cttcttaaat
     5461 gaagtcaaaa ttgagtaagg ccttgatggg cagggtattg tctccttggg gtgaatggag
     5521 tcatcagcag gcttggaatc caagtaagga tgactaacag aaagcctgag ggagggggct
     5581 ggaaaccacg attcgacttt ggggactccc agcagtgcct ttggccttga cctgccagca
     5641 gcagctcttt cttcctcaga ccctacccca tttccaactc tactccctgg gcacttgact
     5701 gagctcagtg actgcaggaa tactggggta gactgggata ctgctccctt tgacagaact
     5761 gggggaattg aaacatcccc acacgatctc ccttcatcct ccctccaggg aaaactggct
     5821 caacgtccaa ggctcttggg caccagtagt gccctgtttt gggttatcag aacctcatcc
     5881 ccatctccag ctacatcagt cattaaggtc aaactcctcc cctccccagc tgtttgcaga
     5941 ggggtccctg gctgtgctgg caggacttcg gtgtccaggg tagacctccc ctctgatgag
     6001 gaggtcctag aatcccgagg ggtcccaggc ctcagccctg cacaggcacc agcatgatac
     6061 agggtgctgg gccactgggg accctccaca gatttatttt tatatacaga gcttgttcat
     6121 tggacagagg gaggtcacct gcaacccata ttgctgtcac ccacccaggg agggagggag
     6181 ggactggttg tgggtagagg ctcctttgcg aaactctgga gatgtgttta tatttctggg
     6241 ttctatatgc agtaccaagt aataaacact tgtgtgttat ggtc
//
