LOCUS       NM_001400827            4207 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus erythrocyte membrane protein band 4.1-like 2
            (Epb41l2), mRNA.
ACCESSION   NM_001400827 XM_039099126
VERSION     NM_001400827.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4207)
  AUTHORS   Kiyomitsu,T. and Cheeseman,I.M.
  TITLE     Cortical dynein and asymmetric membrane elongation coordinately
            position the spindle in anaphase
  JOURNAL   Cell 154 (2), 391-402 (2013)
   PUBMED   23870127
  REMARK    Erratum:[Cell. 2013 Sep 12;154(6):1401]
REFERENCE   2  (bases 1 to 4207)
  AUTHORS   Xia,W. and Liang,F.
  TITLE     4.1G promotes arborization and tight junction formation of
            oligodendrocyte cell line OLN-93
  JOURNAL   J Cell Physiol 227 (6), 2730-2739 (2012)
   PUBMED   21898413
  REMARK    GeneRIF: Results suggest functional roles of 4.1G/Epb4.112 in
            cellular arborization and tight junction formation in
            oligodendrocytes.
REFERENCE   3  (bases 1 to 4207)
  AUTHORS   Kuo,J.C., Han,X., Hsiao,C.T., Yates,J.R. 3rd and Waterman,C.M.
  TITLE     Analysis of the myosin-II-responsive focal adhesion proteome
            reveals a role for beta-Pix in negative regulation of focal
            adhesion maturation
  JOURNAL   Nat Cell Biol 13 (4), 383-393 (2011)
   PUBMED   21423176
REFERENCE   4  (bases 1 to 4207)
  AUTHORS   Buschow,S.I., van Balkom,B.W., Aalberts,M., Heck,A.J., Wauben,M.
            and Stoorvogel,W.
  TITLE     MHC class II-associated proteins in B-cell exosomes and potential
            functional implications for exosome biogenesis
  JOURNAL   Immunol Cell Biol 88 (8), 851-856 (2010)
   PUBMED   20458337
REFERENCE   5  (bases 1 to 4207)
  AUTHORS   Fang,L., Wang,X., Yamoah,K., Chen,P.L., Pan,Z.Q. and Huang,L.
  TITLE     Characterization of the human COP9 signalosome complex using
            affinity purification and mass spectrometry
  JOURNAL   J Proteome Res 7 (11), 4914-4925 (2008)
   PUBMED   18850735
REFERENCE   6  (bases 1 to 4207)
  AUTHORS   Legendre,K., Safieddine,S., Kussel-Andermann,P., Petit,C. and
            El-Amraoui,A.
  TITLE     alphaII-betaV spectrin bridges the plasma membrane and cortical
            lattice in the lateral wall of the auditory outer hair cells
  JOURNAL   J Cell Sci 121 (Pt 20), 3347-3356 (2008)
   PUBMED   18796539
REFERENCE   7  (bases 1 to 4207)
  AUTHORS   Florea,L., Di Francesco,V., Miller,J., Turner,R., Yao,A.,
            Harris,M., Walenz,B., Mobarry,C., Merkulov,G.V., Charlab,R.,
            Dew,I., Deng,Z., Istrail,S., Li,P. and Sutton,G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
REFERENCE   8  (bases 1 to 4207)
  AUTHORS   Lu,D., Yan,H., Othman,T., Turner,C.P., Woolf,T. and Rivkees,S.A.
  TITLE     Cytoskeletal protein 4.1G binds to the third intracellular loop of
            the A1 adenosine receptor and inhibits receptor action
  JOURNAL   Biochem J 377 (Pt 1), 51-59 (2004)
   PUBMED   12974671
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Jan 27, 2022 this sequence version replaced XM_039099126.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360186.1407736.1,
                                           SRR26643284.96.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-180               JAXUCZ010000001.1  21856926-21857105   c
            181-668             JAXUCZ010000001.1  21762735-21763222   c
            669-884             JAXUCZ010000001.1  21761940-21762155   c
            885-989             JAXUCZ010000001.1  21746091-21746195   c
            990-1032            JAXUCZ010000001.1  21738285-21738327   c
            1033-1108           JAXUCZ010000001.1  21737107-21737182   c
            1109-1327           JAXUCZ010000001.1  21732752-21732970   c
            1328-1415           JAXUCZ010000001.1  21731335-21731422   c
            1416-1568           JAXUCZ010000001.1  21727093-21727245   c
            1569-1666           JAXUCZ010000001.1  21726063-21726160   c
            1667-1839           JAXUCZ010000001.1  21721301-21721473   c
            1840-2003           JAXUCZ010000001.1  21716518-21716681   c
            2004-2564           JAXUCZ010000001.1  21703325-21703885   c
            2565-2687           JAXUCZ010000001.1  21701668-21701790   c
            2688-2786           JAXUCZ010000001.1  21699618-21699716   c
            2787-2867           JAXUCZ010000001.1  21698061-21698141   c
            2868-2976           JAXUCZ010000001.1  21694510-21694618   c
            2977-4207           JAXUCZ010000001.1  21682336-21683566   c
FEATURES             Location/Qualifiers
     source          1..4207
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1p12"
     gene            1..4207
                     /gene="Epb41l2"
                     /gene_synonym="Epb4.1l2; RGD1563977"
                     /note="erythrocyte membrane protein band 4.1-like 2"
                     /db_xref="GeneID:309557"
                     /db_xref="RGD:1563977"
     exon            1..180
                     /gene="Epb41l2"
                     /gene_synonym="Epb4.1l2; RGD1563977"
                     /inference="alignment:Splign:2.1.0"
     exon            181..668
                     /gene="Epb41l2"
                     /gene_synonym="Epb4.1l2; RGD1563977"
                     /inference="alignment:Splign:2.1.0"
     CDS             195..2975
                     /gene="Epb41l2"
                     /gene_synonym="Epb4.1l2; RGD1563977"
                     /codon_start=1
                     /product="band 4.1-like protein 2"
                     /protein_id="NP_001387756.1"
                     /db_xref="GeneID:309557"
                     /db_xref="RGD:1563977"
                     /translation="MTTEVASASEVKKGSDPSGADAHKEKAKEVVENEQTAASELDEG
                     KASQPGPTAESQSSPHRRKRGKDPSENRGISRFIPPWLKKQKSYSLVVAKDGGDKKEP
                     TQADGEDQILDKEDTLPEEESRAKGDAEEMAQRKHLEVKVEVREEKSALKSSAEIQPA
                     EQVRKDKEEEVIQDIQEEKLEGGAAKRETKEVQTSELKAEVASQKAAKKTKTVLAKVT
                     LLDGTEFSCDLEKRAKGQALFDRVCEHLNLLEKDYFGLIFQEHPEQKNWLDPAKEIKR
                     QLRSLPWLFTFNVKFYPPDPSQLTEDITRYFLCLQLRQDISSGRLPCSFVTHALLGSY
                     TLQAEHGDYDPEEYDSIDLGDFQFAPTHNKELEEKVAELHKTHRGLSPAQADSQFLEN
                     AKRLSMYGVDLHHAKDSEGVDIKLGVCANGLLIYKDRLRINRFAWPKILKISYKRSNF
                     YIKVRPGELEQFESTIGFKLPNHRAAKRLWKVCVEHHTFYRLVSPEQPPKTKFLTLGS
                     KFRYSGRTQAQTREASTLIDRPAPQFERASSKRVSRSLDGAPIGVVDQSLMKDFPGPP
                     GEGSVPGPGVVSYTTVQDGRRDGKSPTKVTPLLAEGKSSHETLNVVEEKKRAEVGKGE
                     SVITEEMNGKELSPGSGPGETRKVEPMAHKDSTSLSSESSSSSSESEEDVGEYQPHHR
                     VTEGTIREEQEYEEELEEEPGQGAKVVEREAAMPEAIPDRQAGASVLPVETEAQENVV
                     AQKLPGEKGAHRGTAEQDMSEEAEEDQHRVNGEVPHLDIDGLPEIVCPSEPPVVKTEM
                     VTISDASQRTEISTKEVPIVQTETKTITYESPQIDGGAGGDSGVLLTAQTITSESAST
                     TTTTHITKTVKGGISETRIEKRIVITGDAALDHDQALAQAIREAREQHPDMSVTRVVV
                     HKETELAEEGED"
     exon            669..884
                     /gene="Epb41l2"
                     /gene_synonym="Epb4.1l2; RGD1563977"
                     /inference="alignment:Splign:2.1.0"
     exon            885..989
                     /gene="Epb41l2"
                     /gene_synonym="Epb4.1l2; RGD1563977"
                     /inference="alignment:Splign:2.1.0"
     exon            990..1032
                     /gene="Epb41l2"
                     /gene_synonym="Epb4.1l2; RGD1563977"
                     /inference="alignment:Splign:2.1.0"
     exon            1033..1108
                     /gene="Epb41l2"
                     /gene_synonym="Epb4.1l2; RGD1563977"
                     /inference="alignment:Splign:2.1.0"
     exon            1109..1327
                     /gene="Epb41l2"
                     /gene_synonym="Epb4.1l2; RGD1563977"
                     /inference="alignment:Splign:2.1.0"
     exon            1328..1415
                     /gene="Epb41l2"
                     /gene_synonym="Epb4.1l2; RGD1563977"
                     /inference="alignment:Splign:2.1.0"
     exon            1416..1568
                     /gene="Epb41l2"
                     /gene_synonym="Epb4.1l2; RGD1563977"
                     /inference="alignment:Splign:2.1.0"
     exon            1569..1666
                     /gene="Epb41l2"
                     /gene_synonym="Epb4.1l2; RGD1563977"
                     /inference="alignment:Splign:2.1.0"
     exon            1667..1839
                     /gene="Epb41l2"
                     /gene_synonym="Epb4.1l2; RGD1563977"
                     /inference="alignment:Splign:2.1.0"
     exon            1840..2003
                     /gene="Epb41l2"
                     /gene_synonym="Epb4.1l2; RGD1563977"
                     /inference="alignment:Splign:2.1.0"
     exon            2004..2564
                     /gene="Epb41l2"
                     /gene_synonym="Epb4.1l2; RGD1563977"
                     /inference="alignment:Splign:2.1.0"
     exon            2565..2687
                     /gene="Epb41l2"
                     /gene_synonym="Epb4.1l2; RGD1563977"
                     /inference="alignment:Splign:2.1.0"
     exon            2688..2786
                     /gene="Epb41l2"
                     /gene_synonym="Epb4.1l2; RGD1563977"
                     /inference="alignment:Splign:2.1.0"
     exon            2787..2867
                     /gene="Epb41l2"
                     /gene_synonym="Epb4.1l2; RGD1563977"
                     /inference="alignment:Splign:2.1.0"
     exon            2868..2976
                     /gene="Epb41l2"
                     /gene_synonym="Epb4.1l2; RGD1563977"
                     /inference="alignment:Splign:2.1.0"
     exon            2977..4207
                     /gene="Epb41l2"
                     /gene_synonym="Epb4.1l2; RGD1563977"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gggcggggct tccgccagga gggggcggag cttgcggggc gagttctctg acggccccag
       61 ccagggaatt tcaatttgaa acccggtgga gggtggaggc ggcgggagcg gaggactgcg
      121 tccggggctg gagcgggacg cgtccccggg acgagcaagc tcgtgagggg cggtgtccgg
      181 tgtaagctgt aaccatgact actgaagttg cctctgcatc tgaagtgaag aagggctctg
      241 acccatcggg agcagatgcc cacaaggaga aagctaaaga agtagtagag aatgagcaga
      301 ctgcagcgtc tgagctggac gaagggaaag cctcccagcc aggccctaca gctgaaagcc
      361 aaagcagtcc ccaccggcgg aagcgaggga aggatccatc tgagaacagg ggcatctctc
      421 gcttcatacc cccatggctt aagaagcaga agtcttacag ccttgtagta gccaaagatg
      481 gcggagataa aaaagagcct actcaagctg atggggaaga ccagatccta gacaaagagg
      541 atacccttcc cgaagaagag agtcgggcca agggggatgc agaagaaatg gctcagagga
      601 agcacctgga ggttaaggtg gaggtcaggg aagaaaaatc agccttgaaa agcagtgctg
      661 agatccagcc tgctgaacaa gtgaggaagg acaaggagga ggaagtgata caggatatac
      721 aggaagagaa actggaagga ggtgcagcca aaagagagac aaaggaagtt cagacaagtg
      781 agctgaaggc agaggtggcc tctcagaaag ccgccaagaa gaccaagact gtcctggcca
      841 aagtgaccct cctagatggc acagaattca gctgtgacct tgagaaacgc gctaagggac
      901 aagcgttgtt tgacagagtg tgtgagcacc tgaacctctt ggagaaggac tactttggac
      961 ttatatttca ggagcatccc gagcagaaaa actggctaga tcctgcaaag gaaataaaga
     1021 gacagctgag aagtcttccc tggctgttca ctttcaatgt gaaattttac cctccggatc
     1081 cttctcagct gactgaagac atcaccagat acttcctatg ccttcagctg aggcaggaca
     1141 tctcctctgg ccgcctgccc tgctcctttg tgactcacgc cctcttgggg tcctacaccc
     1201 tgcaggctga gcatggggac tatgacccag aagagtatga cagtattgat cttggtgact
     1261 tccagtttgc cccaacccac aacaaggagc tggaggaaaa ggtggcagaa ctgcataaaa
     1321 ctcacagggg cttatctcca gcccaggctg attctcagtt cttagaaaat gcgaagaggc
     1381 tttccatgta cggcgttgac ctgcaccatg ccaaggactc tgaaggtgtg gacatcaagc
     1441 tgggtgtgtg cgctaatggc cttctcattt acaaagacag actgagaatc aatcgctttg
     1501 cttggccgaa gattttgaag atttcctata agcgaagtaa tttctacatt aaagttagac
     1561 caggagagct ggaacagttt gagagcacca ttggattcaa actaccaaac caccgggcag
     1621 ctaaaaggct atggaaagtc tgtgtggagc atcacacttt ctacagactc gtgtctccag
     1681 agcagccacc aaagaccaag ttcttgaccc tggggtccaa attccgctac agtggccgca
     1741 cgcaggcgca gacacgagaa gcaagcaccc tcatagacag gccggcgcca cagtttgagc
     1801 gcgcctctag taagcgcgtc tcgaggagcc tagatggagc cccgattggt gttgtggacc
     1861 aaagtcttat gaaggatttt ccgggccctc ctggagaggg atcagtgcct ggccctggag
     1921 ttgtcagcta tactacagtc caggatggcc ggagggacgg caagagccca actaaagtca
     1981 cacccctgct cgctgaggga aagagttcac atgagactct gaatgtagtg gaggagaaga
     2041 agcgggcaga ggttgggaaa ggcgaaagcg taatcacaga agaaatgaat ggtaaagagc
     2101 tgtcaccggg gagtggtcct ggggagactc gtaaggtgga gcctatggca cacaaagact
     2161 ccacctccct gtcttctgag agcagcagca gcagcagtga gagtgaggag gacgtgggcg
     2221 agtaccagcc ccaccaccga gtgaccgagg gcaccataag ggaagagcag gagtatgaag
     2281 aagagctgga ggaagaaccc ggccaaggcg ccaaggtagt agagagggag gcagcaatgc
     2341 ctgaagccat cccagacaga caagcagggg ccagtgtgct cccggtagag acagaggccc
     2401 aggaaaatgt agttgcccaa aagttacctg gagagaaggg tgcacaccga ggcactgctg
     2461 agcaagacat gagcgaagaa gccgaggaag accagcacag agttaatgga gaggtgcccc
     2521 atcttgacat tgatggtttg ccagagattg tgtgtccttc agagccacca gtggtaaaaa
     2581 cagagatggt aacaatttct gatgcctcac aaaggacaga aatctccacc aaggaagtcc
     2641 ccattgttca aactgagacc aaaaccatca catatgagtc tccacagatt gacggcgggg
     2701 ctggtggtga ttcgggcgtg ttactgaccg cacaaaccat cacatctgag tccgcgtcaa
     2761 caacgaccac cacacacatc accaagactg tgaaaggtgg gatctcagaa acacggattg
     2821 agaaacgcat tgtgatcaca ggagacgcgg ctctggatca tgatcaggcg ctggctcagg
     2881 ccatacggga ggccagagag caacaccctg atatgtcggt cacaagggtg gtagtgcaca
     2941 aagagacaga gttggcggag gaaggagaag actaagaaag tcttttttta aacaacattt
     3001 aacttcatga gtctgaagaa ctttgaccat tccaagtctt aacgccacac cactactcca
     3061 gcagcaaaat tgtactccgg caatgaccag aagcctgaag aattaaaagc caacagcaaa
     3121 ctgtacctta acagctctgg tctctactct cccatacata tctaatatat tattgtttta
     3181 taaccacttc tagacaccct tgctccccta tttttctttc tttccctgct gtcctttttt
     3241 tctttttttt tttttaagtc tttgtttttt attagggatt tgtatttgtt tcctgtccct
     3301 acctgctttt tttgactcgt ttgatcaaat gacagtgaac aaagccagcc gggctggtaa
     3361 ggtgccgttc acttgaacag gtgctgttat gtggaaagga aactctgtaa ctaatttaga
     3421 tagcaatttt cattcttcaa gattgtttcc attcaactct tacagcgaat atttagtttt
     3481 cagactgcag tagttatact gcgtgagaac atattaatac cgattaaaag catttcttac
     3541 atcttaaaat ttttctaata ttaggaagtt tcattatgga tgatttttac attgaccatt
     3601 gaccttccag tcctatgtct ttgtacttta ttagagtccg agactctctg gactggagaa
     3661 ttacgaagct cactgaccgg gtctgtgtga gagaccgtcg gtccgcagtg cagtgcttct
     3721 cagacatgcg ctttgccaca gcattccaga gcaggagaac cgctccatgt gcccttcctg
     3781 ttactaaaag aaatccaggc agcttcgagc cttagagctt cctttcttaa ccttccctat
     3841 cccagttctt cccattatcg gaacacttga gtagaacact cgctttgtac gaaactcctc
     3901 tgtctccatg taaactgacc ctctgccact gggcaggtat ttctgagata gtttgaggac
     3961 tcgcagcttt gtggatgctg gggagaccag gttgggggac agtggggatt tggttgtaag
     4021 aaagctgtac catgtaaagc taacaccaga gctgataggg atttattaac tgtattgaac
     4081 attttctcat ttgcttttga ctatgtatag ttatgacgcc tgattagatt tattgcagct
     4141 tcaagttgtg ttaaatgata ttttgcttta tgtaatactg ttaaaaaata aaagtttgtt
     4201 tattcta
//
