LOCUS       XM_039111267            4547 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus erythrocyte membrane protein band 4.1
            (Epb41), transcript variant X30, mRNA.
ACCESSION   XM_039111267
VERSION     XM_039111267.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4547
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4547
                     /gene="Epb41"
                     /gene_synonym="Epb4.1; RGD1564762"
                     /note="erythrocyte membrane protein band 4.1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 22 ESTs, 2 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     15 samples with support for all annotated introns"
                     /db_xref="GeneID:313052"
                     /db_xref="RGD:1564762"
     CDS             7..2178
                     /gene="Epb41"
                     /gene_synonym="Epb4.1; RGD1564762"
                     /codon_start=1
                     /product="protein 4.1 isoform X30"
                     /protein_id="XP_038967195.1"
                     /db_xref="GeneID:313052"
                     /db_xref="RGD:1564762"
                     /translation="MTTEKSLAAEAENSQHQKEEGEGATNSGQQESQLEEASQAAAAE
                     GSNQGEQKLKASNGDTPTHEDLTKNKERTSESRGLSRLLSSFLKRPKSQVSEEEGREV
                     ESEREKGEGEQKETELGTSLDEDVILKAPIAAPEPELKTDPSLDLHSLSSIETQPAQE
                     EHREDPDSETKEGEGIEECSGTEVKEDPESRAEREPETSQKPIRRHRNMHCKVSLLDD
                     TVYECVVEKHAKGQDLLKRVCEHLNLLEEDYFGLAVWDSTTSKTWLDSAKEIKKQVRG
                     VPWNFTFNVKFYPPDPAQLTEDITRYYLCLQLRQDIVAGRLPCSFATLALLGSYTVQS
                     ELGDYDPELHGVDYVSDFKLAPNQTRELEEKVMELHKSYRSMTPAQADLEFLENAKKL
                     SMYGVDLHKAKDLEGVDIILGVCSSGLLVYKDKLRINRFPWPKVLKISYKRSSFFIKI
                     RPGEQEHYESTIGFKLPSYRAAKKLWKVCVEHHTFFRLTSTDTLPKSKFLALGSKFRY
                     SGRTQAQTRQASALIDRPAPHFERTASKRASRSLDGAAAESTDRSPRPTSAPAIAQSQ
                     VMEGPGAPAKKAPKEAVKVEEKRGEEPAEPEPEPTEAWKDLDKSQEEIKKHHASISEL
                     KKNFMESVPEPRPSEWDKRLSTHSPFRTLNINGQVPTGDGVKKTSILPSERKVGGPES
                     PSYFSPDTYHLGVCKEPVFSFQTDQRRLAQLKELRAKFFLS"
ORIGIN      
        1 aacatcatga cgacagagaa gagtttagcg gctgaagccg agaattctca gcaccagaag
       61 gaagaaggtg agggagccac aaactcaggc cagcaagaaa gtcagctgga ggaggcttcc
      121 caagcggcag cagctgaggg cagtaatcag ggtgagcaga agctgaaagc gtccaatggg
      181 gacaccccaa cacatgaaga cttgaccaag aacaaggagc ggacatcaga aagcagaggc
      241 ctgtcgcgac tgctctcctc attcctcaaa aggcccaagt ctcaggtctc tgaagaagaa
      301 ggccgagaag tagagtcgga gagagagaaa ggcgaaggag aacaaaagga gacggaactg
      361 ggaaccagcc tcgatgaaga cgtcatttta aaagccccca ttgcagctcc tgaacctgag
      421 ctcaaaacag acccatcttt ggatctccat tcattaagca gtatagaaac acagccagct
      481 caggaggaac acagagagga cccggattcg gaaacgaagg aaggagaagg gattgaggag
      541 tgctctggaa cggaggtgaa agaggaccca gaatcaagag cagagagaga gcccgagacc
      601 tcccagaagc ccatcaggag acacaggaac atgcattgca aggtctccct gttggacgac
      661 acagtctacg aatgcgttgt ggagaaacac gctaagggac aagacctgct taagcgagta
      721 tgtgaacacc tcaacctgtt ggaagaagac tactttggtt tagccgtgtg ggacagcaca
      781 acctccaaga catggctgga ttctgccaaa gaaataaaaa agcaggttcg aggtgttcct
      841 tggaatttta catttaatgt gaagttttat ccacctgacc cagcacagtt aacagaagac
      901 ataacaaggt actacttatg tcttcagctg cggcaggaca tcgttgctgg acgtctgccc
      961 tgttcctttg caacgttagc cctcctcggg tcttacactg tgcagtcgga gctgggagac
     1021 tacgacccag agctccatgg cgtggattat gttagcgact ttaaactggc tccaaatcag
     1081 accagggaac ttgaagagaa ggtcatggag ttgcataaat catacaggtc catgactcca
     1141 gctcaggctg acttggaatt tcttgagaat gccaaaaagt tgtccatgta tggagttgat
     1201 cttcataaag caaaggactt ggagggagtg gatatcatcc taggagtctg ctctagtggc
     1261 cttttggttt acaaagataa gttgagaatt aaccgtttcc cttggcccaa agtgctaaag
     1321 atttcttaca aacgtagcag ctttttcatc aagatccggc ctggagagca agagcattat
     1381 gaaagcacca ttggcttcaa gcttcccagc tatcgagcag ctaagaaact atggaaagtc
     1441 tgtgtggagc accacacgtt tttcagactg acctctacag acacccttcc caaaagcaag
     1501 ttccttgccc tgggatccaa atttcgatac agtggccgga ctcaagcaca gaccaggcaa
     1561 gccagtgccc tgattgatag gcctgctcca cactttgagc ggacagcaag caaacgggca
     1621 tccaggagcc tcgatggagc agctgccgag tccacagacc gaagccctcg acccacctct
     1681 gccccagcca ttgctcagag tcaggtcatg gaagggccgg gagcacctgc caagaaagca
     1741 ccaaaggaag ccgtgaaggt tgaagagaag cggggagaag agccagctga gcccgagcct
     1801 gagcccacag aagcttggaa ggatttagac aagagtcaag aagagatcaa gaagcatcat
     1861 gccagcatca gtgaactgaa aaagaacttt atggaatcag tacccgaacc acggcccagc
     1921 gagtgggaca agcgcttgtc cacacactca cccttccgga ctcttaacat caacgggcaa
     1981 gtccctaccg gagatggagt gaagaaaact tctatcctcc cctcggagag aaaggttggt
     2041 gggccagagt cccctagcta cttttcccct gatacatatc acttaggggt gtgcaaagaa
     2101 cccgtgttca gcttccagac tgaccagaga aggctggctc aactgaagga actcagagcc
     2161 aagtttttcc tctcatagat gccatccgcc ttgaccacgg agagcagcat acagagatgc
     2221 aggggagaaa gtccaagttg gccaactggg gagcaggggg agacttcctt aaaagttatc
     2281 aaaagtattt gctaagtata taaaccttca tgaggaccat aaccatttca gtcaggattc
     2341 ccaggctgtg cgatcactga ggtctttggg ggatgtattt gcctctcttc ttctctgttg
     2401 ctgcccgcac tccagggtag accctggaga cacattataa aatttataat tttgttctta
     2461 tcttgcagtc tttactgctt ctgttccact gagcaaaatc taattctcat actgaactat
     2521 tgcagttaga gtcgtttttg aagagatatg aaaatatgct ctttatattc tgccattctg
     2581 tttgttagta aaagtaataa cttcattcac gacaagcaga acgcttcttt attgacattg
     2641 tctgatccat agatgattgg cagcatcaaa gcaattaaac aacctgaatg tgtaggaaaa
     2701 acactcaggc acgaataccc tcaccaagac agtaagcgac agagtgaagg gaagcccggg
     2761 accgcttgaa cttccaagtg ttccaacact ggtttaatcc aaacagtaaa ttttagttta
     2821 atcatatagt tgaacctgca gggtaaattg gccaaagtag agaggagcta aaaaccaaga
     2881 gcacccagac gacttcccac acctttgcac atccccaagt atcactcaag catccttcca
     2941 tctgtcattt tgttcatctc tctgtctttc ttgatcttct acgtgaaagc agacacagga
     3001 acgtgctctg ttagtacagg gtgaagagag cagtaaaagg ccagagagac caactgagag
     3061 aaccttgtcc cagcgagaaa atgaagagat tgctcccaag gtttctattc caatccctga
     3121 ggaacacaag gctctcaaaa agtgccgcct ctactctagt gctttcccgt cgcctcgcat
     3181 tcctttcatg atgtcttttc tcctggtcct tgccctggct gtttggtggc tgatctttct
     3241 gtgactggaa aacagggtgc tcaagactaa aaccactcaa ctctgtctct ggcttcagat
     3301 gtgtaattac ccacgtcacg cctcggaccc tgagcgtcac tgtcataggg acctccggag
     3361 gccgtttttc ttgtcagtaa taaaatgtga atctctggag agtctacatt gtgaggaaaa
     3421 aggagtagca atggattggc ccaccagtac tcctgcccca aagtcaactc gttaggcaaa
     3481 tcaaatggag gtgcatggca ggtggtaccc caaagctacc gtgcatgctc ttactgttga
     3541 cctgttctgt cctctgctca gtgtctcaca cagactggga caccctgaac aaatgtgatg
     3601 gactgtttcc cagtcttcta tagccgttat tgtggcatgg gctctgtagt ttaagaagaa
     3661 attcaacttc ccaacctttg aaaaagcctt aaaatcaaag ttttaatcca aaaatccata
     3721 accactcctt ttcttagagt gtctaatcag tacatgcaaa ggccttttct tgaaggggct
     3781 ttgacacctg tggccttttt gttagtgttt atgaccggaa tggaacaggc agttttattc
     3841 tgcctggtgt gtagaagagt catgcagagg ttaaatgctg tcttttaatg cacagagagt
     3901 tgatgtagtt taggaaaatg gtgctggtgt cccttggcct ctagccaggg tggaaaattt
     3961 cagactacct acctttaaaa gtcctagagt acagattaac tcgagatctg ttatgtaaac
     4021 acacttttct ctaaattgaa atattgttat ttccttgtgg cataagtaat tattgctaga
     4081 agcaatattt aactgttata ataagcttaa atgatacttt gtttccttgt acttcaaacc
     4141 tgttctccca cttgtgttat aatctattgt ttctaatcag ctgccttgaa tctaagcttt
     4201 cactgtgacg tgtgtccagt ttgcatgtgg attatgaggc tttcctgatg tagaggtgag
     4261 cacgccctcc tcagagcacc attcggatgc taaaccggtg gtttctcacc ttaactatat
     4321 taaccttgca tgatgtcgct tgcttcccga cgcacctgaa agcatccatc tggatcactt
     4381 gtttacgtct caaacactcg tctagactct gagttcgtag agtcatcgcg ttgagactct
     4441 atcttttata ttatttctta gtgctttttg ctcactgaaa tttctaaaga tggtttttgc
     4501 ctttgaagag ggggacgggg agagagagta aaaaaaaaaa aaaaaaa
//
