LOCUS       XM_039111266            4550 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus erythrocyte membrane protein band 4.1
            (Epb41), transcript variant X29, mRNA.
ACCESSION   XM_039111266
VERSION     XM_039111266.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4550
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4550
                     /gene="Epb41"
                     /gene_synonym="Epb4.1; RGD1564762"
                     /note="erythrocyte membrane protein band 4.1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 119 ESTs, 2 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     15 samples with support for all annotated introns"
                     /db_xref="GeneID:313052"
                     /db_xref="RGD:1564762"
     CDS             7..2181
                     /gene="Epb41"
                     /gene_synonym="Epb4.1; RGD1564762"
                     /codon_start=1
                     /product="protein 4.1 isoform X29"
                     /protein_id="XP_038967194.1"
                     /db_xref="GeneID:313052"
                     /db_xref="RGD:1564762"
                     /translation="MTTEKSLAAEAENSQHQKEEGEGATNSGQQESQLEEASQAAAAE
                     GSNQGEQKLKASNGDTPTHEDLTKNKERTSESRGLSRLLSSFLKRPKSQVSEEEGREV
                     ESEREKGEGEQKETELGTSLDEDVILKAPIAAPEPELKTDPSLDLHSLSSIETQPAQE
                     EHREDPDSETKEGEGIEECSGTEVKEDPESRAEREPETSQKPIRRHRNMHCKVSLLDD
                     TVYECVVEKHAKGQDLLKRVCEHLNLLEEDYFGLAVWDSTTSKTWLDSAKEIKKQVRG
                     VPWNFTFNVKFYPPDPAQLTEDITRYYLCLQLRQDIVAGRLPCSFATLALLGSYTVQS
                     ELGDYDPELHGVDYVSDFKLAPNQTRELEEKVMELHKSYRSMTPAQADLEFLENAKKL
                     SMYGVDLHKAKDLEGVDIILGVCSSGLLVYKDKLRINRFPWPKVLKISYKRSSFFIKI
                     RPGEQEHYESTIGFKLPSYRAAKKLWKVCVEHHTFFRLTSTDTLPKSKFLALGSKFRY
                     SGRTQAQTRQASALIDRPAPHFERTASKRASRSLDGAAAAESTDRSPRPTSAPAIAQS
                     QVMEGPGAPAKKAPKEAVKVEEKRGEEPAEPEPEPTEAWKDLDKSQEEIKKHHASISE
                     LKKNFMESVPEPRPSEWDKRLSTHSPFRTLNINGQVPTGDGVKKTSILPSERKVGGPE
                     SPSYFSPDTYHLGVCKEPVFSFQTDQRRLAQLKELRAKFFLS"
ORIGIN      
        1 aacatcatga cgacagagaa gagtttagcg gctgaagccg agaattctca gcaccagaag
       61 gaagaaggtg agggagccac aaactcaggc cagcaagaaa gtcagctgga ggaggcttcc
      121 caagcggcag cagctgaggg cagtaatcag ggtgagcaga agctgaaagc gtccaatggg
      181 gacaccccaa cacatgaaga cttgaccaag aacaaggagc ggacatcaga aagcagaggc
      241 ctgtcgcgac tgctctcctc attcctcaaa aggcccaagt ctcaggtctc tgaagaagaa
      301 ggccgagaag tagagtcgga gagagagaaa ggcgaaggag aacaaaagga gacggaactg
      361 ggaaccagcc tcgatgaaga cgtcatttta aaagccccca ttgcagctcc tgaacctgag
      421 ctcaaaacag acccatcttt ggatctccat tcattaagca gtatagaaac acagccagct
      481 caggaggaac acagagagga cccggattcg gaaacgaagg aaggagaagg gattgaggag
      541 tgctctggaa cggaggtgaa agaggaccca gaatcaagag cagagagaga gcccgagacc
      601 tcccagaagc ccatcaggag acacaggaac atgcattgca aggtctccct gttggacgac
      661 acagtctacg aatgcgttgt ggagaaacac gctaagggac aagacctgct taagcgagta
      721 tgtgaacacc tcaacctgtt ggaagaagac tactttggtt tagccgtgtg ggacagcaca
      781 acctccaaga catggctgga ttctgccaaa gaaataaaaa agcaggttcg aggtgttcct
      841 tggaatttta catttaatgt gaagttttat ccacctgacc cagcacagtt aacagaagac
      901 ataacaaggt actacttatg tcttcagctg cggcaggaca tcgttgctgg acgtctgccc
      961 tgttcctttg caacgttagc cctcctcggg tcttacactg tgcagtcgga gctgggagac
     1021 tacgacccag agctccatgg cgtggattat gttagcgact ttaaactggc tccaaatcag
     1081 accagggaac ttgaagagaa ggtcatggag ttgcataaat catacaggtc catgactcca
     1141 gctcaggctg acttggaatt tcttgagaat gccaaaaagt tgtccatgta tggagttgat
     1201 cttcataaag caaaggactt ggagggagtg gatatcatcc taggagtctg ctctagtggc
     1261 cttttggttt acaaagataa gttgagaatt aaccgtttcc cttggcccaa agtgctaaag
     1321 atttcttaca aacgtagcag ctttttcatc aagatccggc ctggagagca agagcattat
     1381 gaaagcacca ttggcttcaa gcttcccagc tatcgagcag ctaagaaact atggaaagtc
     1441 tgtgtggagc accacacgtt tttcagactg acctctacag acacccttcc caaaagcaag
     1501 ttccttgccc tgggatccaa atttcgatac agtggccgga ctcaagcaca gaccaggcaa
     1561 gccagtgccc tgattgatag gcctgctcca cactttgagc ggacagcaag caaacgggca
     1621 tccaggagcc tcgatggagc agcagctgcc gagtccacag accgaagccc tcgacccacc
     1681 tctgccccag ccattgctca gagtcaggtc atggaagggc cgggagcacc tgccaagaaa
     1741 gcaccaaagg aagccgtgaa ggttgaagag aagcggggag aagagccagc tgagcccgag
     1801 cctgagccca cagaagcttg gaaggattta gacaagagtc aagaagagat caagaagcat
     1861 catgccagca tcagtgaact gaaaaagaac tttatggaat cagtacccga accacggccc
     1921 agcgagtggg acaagcgctt gtccacacac tcacccttcc ggactcttaa catcaacggg
     1981 caagtcccta ccggagatgg agtgaagaaa acttctatcc tcccctcgga gagaaaggtt
     2041 ggtgggccag agtcccctag ctacttttcc cctgatacat atcacttagg ggtgtgcaaa
     2101 gaacccgtgt tcagcttcca gactgaccag agaaggctgg ctcaactgaa ggaactcaga
     2161 gccaagtttt tcctctcata gatgccatcc gccttgacca cggagagcag catacagaga
     2221 tgcaggggag aaagtccaag ttggccaact ggggagcagg gggagacttc cttaaaagtt
     2281 atcaaaagta tttgctaagt atataaacct tcatgaggac cataaccatt tcagtcagga
     2341 ttcccaggct gtgcgatcac tgaggtcttt gggggatgta tttgcctctc ttcttctctg
     2401 ttgctgcccg cactccaggg tagaccctgg agacacatta taaaatttat aattttgttc
     2461 ttatcttgca gtctttactg cttctgttcc actgagcaaa atctaattct catactgaac
     2521 tattgcagtt agagtcgttt ttgaagagat atgaaaatat gctctttata ttctgccatt
     2581 ctgtttgtta gtaaaagtaa taacttcatt cacgacaagc agaacgcttc tttattgaca
     2641 ttgtctgatc catagatgat tggcagcatc aaagcaatta aacaacctga atgtgtagga
     2701 aaaacactca ggcacgaata ccctcaccaa gacagtaagc gacagagtga agggaagccc
     2761 gggaccgctt gaacttccaa gtgttccaac actggtttaa tccaaacagt aaattttagt
     2821 ttaatcatat agttgaacct gcagggtaaa ttggccaaag tagagaggag ctaaaaacca
     2881 agagcaccca gacgacttcc cacacctttg cacatcccca agtatcactc aagcatcctt
     2941 ccatctgtca ttttgttcat ctctctgtct ttcttgatct tctacgtgaa agcagacaca
     3001 ggaacgtgct ctgttagtac agggtgaaga gagcagtaaa aggccagaga gaccaactga
     3061 gagaaccttg tcccagcgag aaaatgaaga gattgctccc aaggtttcta ttccaatccc
     3121 tgaggaacac aaggctctca aaaagtgccg cctctactct agtgctttcc cgtcgcctcg
     3181 cattcctttc atgatgtctt ttctcctggt ccttgccctg gctgtttggt ggctgatctt
     3241 tctgtgactg gaaaacaggg tgctcaagac taaaaccact caactctgtc tctggcttca
     3301 gatgtgtaat tacccacgtc acgcctcgga ccctgagcgt cactgtcata gggacctccg
     3361 gaggccgttt ttcttgtcag taataaaatg tgaatctctg gagagtctac attgtgagga
     3421 aaaaggagta gcaatggatt ggcccaccag tactcctgcc ccaaagtcaa ctcgttaggc
     3481 aaatcaaatg gaggtgcatg gcaggtggta ccccaaagct accgtgcatg ctcttactgt
     3541 tgacctgttc tgtcctctgc tcagtgtctc acacagactg ggacaccctg aacaaatgtg
     3601 atggactgtt tcccagtctt ctatagccgt tattgtggca tgggctctgt agtttaagaa
     3661 gaaattcaac ttcccaacct ttgaaaaagc cttaaaatca aagttttaat ccaaaaatcc
     3721 ataaccactc cttttcttag agtgtctaat cagtacatgc aaaggccttt tcttgaaggg
     3781 gctttgacac ctgtggcctt tttgttagtg tttatgaccg gaatggaaca ggcagtttta
     3841 ttctgcctgg tgtgtagaag agtcatgcag aggttaaatg ctgtctttta atgcacagag
     3901 agttgatgta gtttaggaaa atggtgctgg tgtcccttgg cctctagcca gggtggaaaa
     3961 tttcagacta cctaccttta aaagtcctag agtacagatt aactcgagat ctgttatgta
     4021 aacacacttt tctctaaatt gaaatattgt tatttccttg tggcataagt aattattgct
     4081 agaagcaata tttaactgtt ataataagct taaatgatac tttgtttcct tgtacttcaa
     4141 acctgttctc ccacttgtgt tataatctat tgtttctaat cagctgcctt gaatctaagc
     4201 tttcactgtg acgtgtgtcc agtttgcatg tggattatga ggctttcctg atgtagaggt
     4261 gagcacgccc tcctcagagc accattcgga tgctaaaccg gtggtttctc accttaacta
     4321 tattaacctt gcatgatgtc gcttgcttcc cgacgcacct gaaagcatcc atctggatca
     4381 cttgtttacg tctcaaacac tcgtctagac tctgagttcg tagagtcatc gcgttgagac
     4441 tctatctttt atattatttc ttagtgcttt ttgctcactg aaatttctaa agatggtttt
     4501 tgcctttgaa gagggggacg gggagagaga gtaaaaaaaa aaaaaaaaaa
//
