LOCUS       NM_001401664            3087 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus ectonucleoside triphosphate diphosphohydrolase 4
            (Entpd4), transcript variant 1, mRNA.
ACCESSION   NM_001401664 XM_006252275
VERSION     NM_001401664.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3087)
  AUTHORS   Biederbick,A., Rose,S. and Elsasser,H.P.
  TITLE     A human intracellular apyrase-like protein, LALP70, localizes to
            lysosomal/autophagic vacuoles
  JOURNAL   J Cell Sci 112 (Pt 15), 2473-2484 (1999)
   PUBMED   10393803
REFERENCE   2  (bases 1 to 3087)
  AUTHORS   Wang,T.F. and Guidotti,G.
  TITLE     Golgi localization and functional expression of human uridine
            diphosphatase
  JOURNAL   J Biol Chem 273 (18), 11392-11399 (1998)
   PUBMED   9556635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000015.1.
            
            On Feb 17, 2022 this sequence version replaced XM_006252275.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643284.18019.1,
                                           SRR26643292.54521.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-148               JAXUCZ010000015.1  51040674-51040821
            149-257             JAXUCZ010000015.1  51050428-51050536
            258-455             JAXUCZ010000015.1  51051616-51051813
            456-661             JAXUCZ010000015.1  51052788-51052993
            662-812             JAXUCZ010000015.1  51056023-51056173
            813-916             JAXUCZ010000015.1  51056734-51056837
            917-976             JAXUCZ010000015.1  51058065-51058124
            977-1131            JAXUCZ010000015.1  51058330-51058484
            1132-1298           JAXUCZ010000015.1  51059957-51060123
            1299-1623           JAXUCZ010000015.1  51063440-51063764
            1624-1709           JAXUCZ010000015.1  51065288-51065373
            1710-1871           JAXUCZ010000015.1  51066069-51066230
            1872-3087           JAXUCZ010000015.1  51067235-51068450
FEATURES             Location/Qualifiers
     source          1..3087
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /map="15p11"
     gene            1..3087
                     /gene="Entpd4"
                     /note="ectonucleoside triphosphate diphosphohydrolase 4"
                     /db_xref="GeneID:361063"
                     /db_xref="RGD:1309511"
     exon            1..148
                     /gene="Entpd4"
                     /inference="alignment:Splign:2.1.0"
     exon            149..257
                     /gene="Entpd4"
                     /inference="alignment:Splign:2.1.0"
     CDS             250..2091
                     /gene="Entpd4"
                     /EC_number="3.6.1.6"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /codon_start=1
                     /product="ectonucleoside triphosphate diphosphohydrolase 4
                     isoform 1"
                     /protein_id="NP_001388593.1"
                     /db_xref="GeneID:361063"
                     /db_xref="RGD:1309511"
                     /translation="MGRIGISCLFPASWHFSISPVGCPRILNTNLRQIVVISILAAAV
                     SLLYFSVVIIRSKYGWLSKDKKFQRYLARVTDVEATDTNNPNVNYGIVVDCGSSGSRI
                     FVYCWPQHNGNPHDLLDIRQMRDKNRKPVVMKIKPGISEFATSPEKVSDYISPLLSFA
                     AEHVPRAKHKETPLYILCTAGMRVLPESQQKAILEDLLTDIPVHYDFLFSDSHAEVIS
                     GKQEGVYAWIGINFVLGRFEHIEEDDEAVVEVNIPGSESSEAIVRKRTAGILDMGGVS
                     TQIAYEVPKTVSFASSQQEEVAKNLLAEFNLGCDVHQTEHVYRVYVATFLGFGGNAAR
                     QRYEDRLFASTVQKNRLLGKQTGLTPDAPFLDPCLPLDLKDEIQQNGQTLYLRGTGDF
                     DLCRETLQPFMNKTNETQTSLNGVYQPPIHFQNSEFYGFSEFYYCTEDVLRMGGDYNA
                     AKFTKAAKDYCATKWSILRERFDRGLYASHADLHRLKYQCFKSAWMFEVFHRGFSFPV
                     TYKSLKTALQVYDKEVQWTLGAILYRTRFLPLRDIRQEVFRAGHAHWQGVSFVYNHYL
                     FSGCFLVVLLSILLYLLRLRRIHRRAPRTGSLWMEEGLPSQKGPGPL"
     exon            258..455
                     /gene="Entpd4"
                     /inference="alignment:Splign:2.1.0"
     exon            456..661
                     /gene="Entpd4"
                     /inference="alignment:Splign:2.1.0"
     exon            662..812
                     /gene="Entpd4"
                     /inference="alignment:Splign:2.1.0"
     exon            813..916
                     /gene="Entpd4"
                     /inference="alignment:Splign:2.1.0"
     exon            917..976
                     /gene="Entpd4"
                     /inference="alignment:Splign:2.1.0"
     exon            977..1131
                     /gene="Entpd4"
                     /inference="alignment:Splign:2.1.0"
     exon            1132..1298
                     /gene="Entpd4"
                     /inference="alignment:Splign:2.1.0"
     exon            1299..1623
                     /gene="Entpd4"
                     /inference="alignment:Splign:2.1.0"
     exon            1624..1709
                     /gene="Entpd4"
                     /inference="alignment:Splign:2.1.0"
     exon            1710..1871
                     /gene="Entpd4"
                     /inference="alignment:Splign:2.1.0"
     exon            1872..3087
                     /gene="Entpd4"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgtgcgcgcg ccggcgcgag ttgtgacgtg acgttggcgg gcgcgcgcag cgtgactccc
       61 gaaggagccg aacctccgca aagctggtgg ccgggatgcg gtgcgctatt ggccgcccgc
      121 tcccccggag ccgcggcccg cccagcaggg tagctctgac tccatgaaga ccccagctcc
      181 gattctgtca ttgtagatga cgagaactga atcccacaac attgcctgga ccttgcttgg
      241 cctttcagta tggggaggat tggcatttcc tgtctctttc ctgcttcttg gcattttagc
      301 atctcgccag tgggctgtcc tcgaattctg aacaccaatt tacgacaaat cgttgtcatt
      361 agcatcctgg ctgcagctgt ctccctttta tacttttctg ttgtcataat ccgcagcaag
      421 tatgggtggc tgtcaaagga caagaaattt caaaggtact tggcccgagt cacagacgtt
      481 gaggctacag acaccaacaa ccccaacgtg aactatggca ttgtggtgga ctgcggcagt
      541 agtgggtctc ggatatttgt ctattgctgg cctcagcaca acggcaatcc tcatgacctg
      601 ctggacatca gacagatgag ggacaaaaac cggaagccag tggtgatgaa aattaagccc
      661 ggcatttcag agtttgctac ctctccagaa aaagtcagcg attacatctc tccgcttctg
      721 agctttgctg cagaacatgt gcctcgggca aaacacaaag agacacctct ctatatcctc
      781 tgcacagccg ggatgagagt ccttcctgaa agccagcaga aagccatcct ggaggatctc
      841 ctgaccgaca tccctgtgca ctatgacttc ttgttttctg actcccatgc cgaagtcatc
      901 tcaggaaaac aggaaggtgt gtatgcttgg attggcatta attttgtcct tggacggttt
      961 gagcatattg aggaggatga tgaggcagtt gtggaagtca acattcctgg cagtgagagc
     1021 agcgaggcca tcgtgcggaa aaggacagcc ggtattcttg acatgggagg cgtgtctacc
     1081 cagatagcat acgaagtccc caaaactgta agctttgcct cctcacagca ggaagaagta
     1141 gctaaaaact tattagctga attcaacttg gggtgtgatg tccaccagac tgagcatgtg
     1201 taccgcgtct atgtggccac atttcttggg tttggtggta atgctgctcg gcagagatat
     1261 gaagacagac tatttgccag cacagttcag aaaaacaggc ttctgggtaa acagactggc
     1321 ctgactcctg atgctccatt tctggacccc tgcttgcctc tggaccttaa agatgagatc
     1381 cagcaaaatg ggcaaaccct gtaccttcgg gggacaggag acttcgacct gtgtcgagag
     1441 accctccagc ctttcatgaa caaaaccaat gagacacaga cttctctcaa tggagtctac
     1501 cagcctccaa tccacttcca gaacagtgaa ttctatggct tctctgagtt ctactattgc
     1561 accgaagatg tcttacgaat ggggggagac tacaatgctg ctaaatttac taaagctgcc
     1621 aaggattact gtgcaacaaa gtggtcgatc ttgcgggaac gctttgaccg aggactgtac
     1681 gcctctcatg ccgacctcca tcgacttaag tatcagtgtt tcaaatcagc ctggatgttt
     1741 gaggtgttcc acaggggctt ctccttccct gtcacataca aaagtctgaa gacagccttg
     1801 caggtgtatg acaaggaagt gcagtggacc ctgggggcaa tcctttacag gacccgcttt
     1861 ctgcccttga gagacatccg acaggaggtg ttccgggctg gccatgcaca ctggcagggc
     1921 gtgtcctttg tctacaacca ctatctgttc tctggttgct tcctggtcgt ccttctatcc
     1981 atccttctct acctgctgcg gcttcggcgc atccaccgca gggcaccccg cactggctct
     2041 ctgtggatgg aggaaggcct gccctcccag aagggccctg ggcccttgtg acagacactg
     2101 tgtcagcttg aagaagactc tacaggaaaa gccatttttg cctcagggtt tctcatatgc
     2161 tccaattgtt ttgtttgtcc ctttcctttc tgttacaaaa ccccactgat ttgtaaaccc
     2221 tgctgtctag aggtactacc attttgaacg cagcttaaaa tggaggagtg gaaaagagac
     2281 ttcactcagc ttgtgctgca cagcatctgc cacacatcag taaggtttgt aggaagtgct
     2341 gcatttttag cacatgcact tgggtacatg cacaagggga cagtgggcaa gttcccatca
     2401 gcgtagatgg aacttcagag tggtcctggg acagaaccaa gctgtgagtt ttaccctctt
     2461 tcctctccaa acacctcaag ctagaagggg ggcgtttgat tttatttgct gctcaggtct
     2521 gtcaccatct gtgttttctt ggcagattta agactttagt catttatagc aaaaatcgac
     2581 aagatggtgc acagggaggt gatacgaaag aggggtcagt gatgagaact actgaggaga
     2641 acattgccct gctgcaggcg atcgcatgcc tgtaaactag ccgcacttgc ccctgtgctg
     2701 gggagctctg tcgccctctt agagcagcag tgagtttgtt tgagtgctca tttgttttat
     2761 ttgtttgttt gtttttaaac cagaaagtct ataaagttcc caggtttagt ggtctgagag
     2821 cgtggaccag gagtatgccc tgcaggcacc cagtacctct gagaggcagg tctgtgctgt
     2881 cgagctgccc cagcctcttc cacttcctgt gtcaccccca tggttcagat ctcttcactg
     2941 tctttcttca ggacacccca cacattgctc gacagtcctt gttgtcacac tgtggctgca
     3001 gctgtcgctg gcagtggcac tgtaagccca caccgtggaa gagcctgaat ttaaaataag
     3061 aaataaatgc acacgttgaa aacaaat
//
