LOCUS       XM_039084320            1351 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus enolase superfamily member 1 (Enosf1),
            mRNA.
ACCESSION   XM_039084320
VERSION     XM_039084320.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 13% of CDS bases
            frameshifts          :: corrected 4 indels
            internal stop codons :: corrected 1 genomic stop codons
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-17                JACYVU010000215.1  46344958-46344974
            18-225              JACYVU010000215.1  46352610-46352817
            226-261             JACYVU010000215.1  46360248-46360283
            262-263             "NN"               1-2
            264-330             JACYVU010000215.1  46360284-46360350
            331-383             JACYVU010000215.1  46364862-46364914
            384-477             JACYVU010000215.1  46368810-46368903
            478-504             JACYVU010000215.1  46369181-46369207
            505-540             JACYVU010000215.1  46370033-46370068
            541-542             "NN"               1-2
            543-574             JACYVU010000215.1  46370069-46370100
            575-613             JACYVU010000215.1  46370218-46370256
            614-695             JACYVU010000215.1  46370679-46370760
            696-746             JACYVU010000215.1  46371197-46371247
            747-774             JACYVU010000215.1  46373297-46373324
            775-775             "N"                1-1
            776-851             JACYVU010000215.1  46373325-46373400
            852-881             JACYVU010000215.1  46374116-46374145
            882-969             JACYVU010000215.1  46375478-46375565
            970-1011            JACYVU010000215.1  46380550-46380591
            1012-1138           JACYVU010000215.1  46381334-46381460
            1139-1206           JACYVU010000215.1  46381702-46381769
            1207-1207           "N"                1-1
            1208-1235           JACYVU010000215.1  46381770-46381797
            1236-1351           JACYVU010000215.1  46384418-46384533
FEATURES             Location/Qualifiers
     source          1..1351
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1351
                     /gene="Enosf1"
                     /note="enolase superfamily member 1; The sequence of the
                     model RefSeq transcript was modified relative to its
                     source genomic sequence to represent the inferred CDS:
                     inserted 6 bases in 4 codons; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     ESTs, 1 Protein, and 37% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:120094592"
                     /db_xref="RGD:40958853"
     CDS             1..1326
                     /gene="Enosf1"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 6 bases in 4 codons;
                     substituted 1 base at 1 genomic stop codon"
                     /codon_start=1
                     /transl_except=(pos:583..585,aa:OTHER)
                     /product="LOW QUALITY PROTEIN: mitochondrial enolase
                     superfamily member 1"
                     /protein_id="XP_038940248.1"
                     /db_xref="GeneID:120094592"
                     /db_xref="RGD:40958853"
                     /translation="MDLLARHRARSGAREATHGSSRRLPSAFEKERGRICGLSVHNLR
                     FSTSLGGHGSGATVSARATGFTGARRTATVKHTDPHCSAAYVIXEINSEDGLKGSGIM
                     RTLGKDPELILQEKTPGLVNKNLPLRLVQRKERCVERLARAAILNAVRDLWAKQKGKP
                     LWKLRVDMDPEMLLSCVDFLXSDVLTKQGAYEILXNGQLGKKEREKQMLRHGYPAYTV
                     SCAWLGYSDSTLKYFLDSVLLDFYRGVLGFWFKVKVGAEFXDDIQRCCLIRDMNGPEK
                     TLGNTETQKFDLETAILWMSILAEFKPLWIEKPTSQNDIIGHATISEALAPLGIGIAT
                     GEQCHNRVMIKQLLHKALQLLQIDSCRLGSVKENLSVSLMPKKFGIHLPPCWWSWTLN
                     WLVQHLIIFDXSISASLQNRMCEYVDHLHEHFKYPMVIKHASYLPPKVS"
ORIGIN      
        1 atggacttgc tcgcaagaca ccgggccagg tccggggctc gcgaggccac ccacggctcc
       61 agccgcaggc tccccagtgc gttcgaaaag gagcgcggca ggatctgcgg gctctcggtc
      121 cataacctgc gcttttctac atcgctaggt ggtcacggct ccggcgccac ggtaagcgcg
      181 cgggccacag ggttcacagg agcgaggcga acggccacag tgaagcacac agatcctcac
      241 tgctcagctg cctatgtcat cnnagagata aattcagaag atggactcaa aggctctggc
      301 attatgcgca ctctagggaa ggacccagaa ctcatcttgc aggagaaaac tcctgggtta
      361 gtgaacaaga atctgccttt aagattggtc cagagaaagg aaaggtgtgt agaacgtctg
      421 gccagagcag ccattctcaa tgctgtgcgg gacctctggg caaagcaaaa aggaaagcct
      481 ttatggaagc tacgtgtgga catggatcca gagatgctgt tgtcctgtgt tgatttcttg
      541 nnatctgatg tcttgacaaa acagggtgct tacgaaatac tgtagaatgg tcaacttggt
      601 aaaaaagaaa gagaaaaaca aatgctgaga catggctacc ctgcctacac tgtatcatgt
      661 gcctggctgg ggtattcaga cagcacgctg aaatatttcc tggactctgt ccttctggac
      721 ttctatagag gagtccttgg cttttggttt aaagtaaaag ttggggctga atttnaggat
      781 gacatacaga gatgctgcct catcagggac atgaatggac cagaaaagac tttgggaaac
      841 acagaaacac aaaaatttga tcttgagact gctatactgt ggatgtcaat actggctgaa
      901 tttaagccat tgtggattga gaagcccaca tcccagaatg acatcatagg tcatgcaact
      961 atttctgagg cactggcccc actaggaatt ggcattgcta caggagaaca gtgccacaat
     1021 agagtgatga ttaagcaact cctacacaag gccctgcaat tactccagat tgacagctgt
     1081 agactgggga gtgtcaaaga aaacctctca gtatcactga tgcccaaaaa gtttggaatc
     1141 catctacccc cttgctggtg gagctggact ctgaactggt tggtacagca cttgattata
     1201 tttgacntgt caatctctgc cagccttcaa aacaggatgt gtgaatatgt ggaccatctg
     1261 catgaacatt tcaaatatcc catggtgatc aaacatgctt catatctgcc tcccaaggta
     1321 agctgaagcc taggacatgt tggagatgtg c
//
