LOCUS       NM_001191069            2256 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus endonuclease, poly(U)-specific (Endou), mRNA.
ACCESSION   NM_001191069 XM_001056619
VERSION     NM_001191069.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2256)
  AUTHORS   Laneve,P., Gioia,U., Ragno,R., Altieri,F., Di Franco,C.,
            Santini,T., Arceci,M., Bozzoni,I. and Caffarelli,E.
  TITLE     The tumor marker human placental protein 11 is an endoribonuclease
  JOURNAL   J Biol Chem 283 (50), 34712-34719 (2008)
   PUBMED   18936097
REFERENCE   2  (bases 1 to 2256)
  AUTHORS   Grundmann,U., Romisch,J., Siebold,B., Bohn,H. and Amann,E.
  TITLE     Cloning and expression of a cDNA encoding human placental protein
            11, a putative serine protease with diagnostic significance as a
            tumor marker
  JOURNAL   DNA Cell Biol 9 (4), 243-250 (1990)
   PUBMED   2350438
REFERENCE   3  (bases 1 to 2256)
  AUTHORS   Inaba,N., Ishige,H., Ijichi,M., Satoh,N., Ohkawa,R., Sekiya,S.,
            Shirotake,S., Takamizawa,H., Renk,T. and Bohn,H.
  TITLE     Immunohistochemical detection of pregnancy-specific protein (SP1)
            and placenta-specific tissue proteins (PP5, PP10, PP11 and PP12) in
            ovarian adenocarcinomas
  JOURNAL   Oncodev Biol Med 3 (5-6), 379-389 (1982)
   PUBMED   6755403
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            On Oct 14, 2022 this sequence version replaced NM_001191069.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643295.29990.1,
                                           SRR26643297.26931.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-85                JAXUCZ010000007.1  130745588-130745672 c
            86-208              JAXUCZ010000007.1  130740707-130740829 c
            209-271             JAXUCZ010000007.1  130733889-130733951 c
            272-409             JAXUCZ010000007.1  130733253-130733390 c
            410-581             JAXUCZ010000007.1  130732711-130732882 c
            582-781             JAXUCZ010000007.1  130731979-130732178 c
            782-895             JAXUCZ010000007.1  130727375-130727488 c
            896-1002            JAXUCZ010000007.1  130726672-130726778 c
            1003-1145           JAXUCZ010000007.1  130725846-130725988 c
            1146-2256           JAXUCZ010000007.1  130723972-130725082 c
FEATURES             Location/Qualifiers
     source          1..2256
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q36"
     gene            1..2256
                     /gene="Endou"
                     /gene_synonym="Pp11r"
                     /note="endonuclease, poly(U)-specific"
                     /db_xref="GeneID:680317"
                     /db_xref="RGD:1593011"
     exon            1..85
                     /gene="Endou"
                     /gene_synonym="Pp11r"
                     /inference="alignment:Splign:2.1.0"
     CDS             31..1266
                     /gene="Endou"
                     /gene_synonym="Pp11r"
                     /note="placental protein 11 related; poly(U)-specific
                     endoribonuclease; uridylate-specific endoribonuclease"
                     /codon_start=1
                     /product="uridylate-specific endoribonuclease precursor"
                     /protein_id="NP_001177998.1"
                     /db_xref="GeneID:680317"
                     /db_xref="RGD:1593011"
                     /translation="MKACVPLIVAMLCGLTWAGNLESCASRCNERFNRDAVCQCDRRC
                     PQHDDCCDDYEHLCTDEEGPPEPKALLDPEDEIPASYLYSSPSSCQGRCRETYDKHHP
                     CHCNDRCLEFGNCCEDFGNLCGDHEGFSHSSDAITKEELKSISETIYRVDINKAQKKD
                     IVLNSQNQISPAETGNQVDRCPEPLFKYVNEKLFSKPTYAAFINLLNNYQRATGHGEH
                     FSAQQLEEQVVFLREVMKTAVMKELYSFLRHQNRYGSQQEFVEDLKNMWFGLYSRGNE
                     EGDSSGFEHVFSGEVKKGKVTGFHNWIRFYLQEKEGLLDYYSHNYDGPWDSYPDVLAM
                     QFNWDGYYKEVGSVFIGSSPEFEFALYSLCFITRPGKKCHLSLGGYPLAIQTYTWDKT
                     TYGNGKKYIATAYVVSSTQ"
     exon            86..208
                     /gene="Endou"
                     /gene_synonym="Pp11r"
                     /inference="alignment:Splign:2.1.0"
     exon            209..271
                     /gene="Endou"
                     /gene_synonym="Pp11r"
                     /inference="alignment:Splign:2.1.0"
     exon            272..409
                     /gene="Endou"
                     /gene_synonym="Pp11r"
                     /inference="alignment:Splign:2.1.0"
     exon            410..581
                     /gene="Endou"
                     /gene_synonym="Pp11r"
                     /inference="alignment:Splign:2.1.0"
     exon            582..781
                     /gene="Endou"
                     /gene_synonym="Pp11r"
                     /inference="alignment:Splign:2.1.0"
     exon            782..895
                     /gene="Endou"
                     /gene_synonym="Pp11r"
                     /inference="alignment:Splign:2.1.0"
     exon            896..1002
                     /gene="Endou"
                     /gene_synonym="Pp11r"
                     /inference="alignment:Splign:2.1.0"
     exon            1003..1145
                     /gene="Endou"
                     /gene_synonym="Pp11r"
                     /inference="alignment:Splign:2.1.0"
     exon            1146..2256
                     /gene="Endou"
                     /gene_synonym="Pp11r"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cccaacggcc gttctgctgc cgctgccatc atgaaagcct gtgtcccttt aatagtggct
       61 atgctctgtg gcctaacctg ggctggaaac ctggagtcgt gcgcatctcg ctgtaatgag
      121 agatttaacc gggatgctgt ctgccagtgt gatcgccggt gcccccagca tgatgactgc
      181 tgtgacgact atgaacatct gtgcactgat gaagaaggcc ccccagagcc aaaggcactc
      241 ctggatccgg aggatgagat cccagccagc tacctgtact cctcaccaag ctcctgccag
      301 ggccgctgcc gggaaaccta cgacaaacac catccttgcc actgcaatga ccgctgccta
      361 gagtttggga actgctgtga ggattttggc aacctgtgtg gtgaccatga gggtttctcc
      421 cacagcagcg atgccatcac caaggaggag cttaagagta tctccgagac catctacagg
      481 gtagacatca ataaagccca gaagaaagac attgtcctca atagtcaaaa ccagatctcc
      541 ccggcagaga caggaaacca agtggatcga tgcccagagc cgctcttcaa gtatgtcaac
      601 gagaagctct tctccaagcc tacctatgcg gcctttatca acctactcaa caattaccag
      661 cgggccacag gccacgggga gcacttcagt gcccaacagc tagaagagca ggttgttttc
      721 ctcagggagg tcatgaagac agctgtcatg aaagagcttt acagctttct ccgtcaccaa
      781 aaccgttacg gctcccaaca ggagttcgtg gaagatttga agaacatgtg gtttgggctc
      841 tactcaagag gcaatgaaga aggggattcg agtggctttg aacatgtctt ctctggcgag
      901 gtgaagaagg gcaaggtcac tggcttccat aactggatcc gcttctacct gcaagagaag
      961 gagggtttgc ttgactatta cagtcacaac tacgacgggc cttgggattc ctacccagat
     1021 gtcctggcca tgcagttcaa ctgggatggc tattacaagg aagtgggctc agtcttcatt
     1081 ggcagcagcc ctgagttcga gtttgccctt tactctctgt gcttcatcac caggccaggc
     1141 aaaaagtgcc atttgagcct ggggggctat cctttggcta tccagaccta cacctgggac
     1201 aagaccacct acgggaatgg caagaagtac attgccacag cctatgtggt gtcttctacc
     1261 caatagaact agcagccagc tggggaatga gagtagaggg ccaagcagga tctgggtgct
     1321 ctttgctctt tactggggag gggagggagg agcctcggag gaatcccaga gcccagtttt
     1381 ataaaaggaa tctcaaatct agaaatgccc acttgggaga ggaaaaaaaa gatatgatta
     1441 gaaaaatgca gggaaccagc ctgtgttttg gcaacatgaa ctaggaaata gagctctctc
     1501 tgcctagaga aaggagcagc cttcgagagc tctttaacat gtcgtggggc catgagcaaa
     1561 gtcctgggcc tcacacttcc ctctaatgtg aaggggaggg gtcttcccct cttcctcctt
     1621 ggggcttggg gagggagtga ggctgatggt attatgactg tgaatcatct ttggttgttc
     1681 gtagggagaa caggtagtag aaattcaggg ttacaaaatg gccgttagtg cacactctct
     1741 gcagctgtga ctcagcctgt gttgggtccg aaagaagcgg gtgaatctta gagaatcact
     1801 cagcactgca gagtcatggg ttgggtggtt aagtgggcta gggcaggtgg ttttctcaat
     1861 cctaaatgtc tgtgtggcca acttagcagc tgcttctaga agtttccccc gcttgcagat
     1921 gttcggtgaa gttacagaca tgtgtttgat cccacagtgt tttgtttcgt ttcaaaagaa
     1981 ttcccctcat aggacggagg atgggtgaac atcaaaggga gaaaagaatc tgtaacttgg
     2041 tgtcattgac aattatacta atgtttatcc agctgccaca atttgaaaca ttctgggctg
     2101 gaagaagagg gaccctgggg tttctatttc aacccggaat gacatattta ttcccccctg
     2161 atgttcagca gtcagatgtg gccccataga gccaggcttg taccacagct cagaggcgtc
     2221 aagtttccga ttaaagccac tggagaaaac ctgaaa
//
