LOCUS       NM_001398869            4302 bp    mRNA    linear   ROD 28-MAR-2024
DEFINITION  Rattus norvegicus endonuclease domain containing 1 (Endod1), mRNA.
ACCESSION   NM_001398869 XM_002729871
VERSION     NM_001398869.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4302)
  AUTHORS   Ghosh,D., Lippert,D., Krokhin,O., Cortens,J.P. and Wilkins,J.A.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000008.1.
            
            On Dec 27, 2021 this sequence version replaced XM_002729871.5.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643429.29196.1,
                                           SRR26643295.30714.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840107, SAMN12840116
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-490               JAXUCZ010000008.1  19519518-19520007   c
            491-4302            JAXUCZ010000008.1  19490615-19494426   c
FEATURES             Location/Qualifiers
     source          1..4302
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q12"
     gene            1..4302
                     /gene="Endod1"
                     /gene_synonym="AABR07069219.1; RGD1310444"
                     /note="endonuclease domain containing 1"
                     /db_xref="GeneID:363015"
                     /db_xref="RGD:1310444"
     exon            1..490
                     /gene="Endod1"
                     /gene_synonym="AABR07069219.1; RGD1310444"
                     /inference="alignment:Splign:2.1.0"
     CDS             191..1693
                     /gene="Endod1"
                     /gene_synonym="AABR07069219.1; RGD1310444"
                     /note="endonuclease domain-containing 1 protein"
                     /codon_start=1
                     /product="endonuclease domain-containing 1 protein
                     precursor"
                     /protein_id="NP_001385798.1"
                     /db_xref="GeneID:363015"
                     /db_xref="RGD:1310444"
                     /translation="MGCARWLALGGLLALLGLLQARLLLPQQAGFGECDRFFYAGTPP
                     AGLATEAHVRICQRFAGSERFATLYSPGHRIPVFSAFRAARPASRSAEQRGLLEPQID
                     DPDSNLEEVIDEADAVSVNNLGSKQALSADYLDSDYEIGQLYPFPLNSDLQMSAFPLT
                     NSVPMTRSFRERWHMNLNSLMDRALIPQCSDGKDLYLLTGAVPSDHKVKGKVTVPEFV
                     WLAACCAVPGGGWAMGFIKHTQDSDVIEDVMVRDLEKLLLHKPQLFQDNCGETEQDTE
                     KMKKILEVVNQVQDEERSLQSQENMSPLASTRSQRSALLSPEAPPEGGGSFLGKVLGF
                     LTTPFIKLFQLIYYLITAVLRNVVHLLWFVAKQVINGVASSLYGLGEAVVSYLVAIGQ
                     ELVSIPWKVLKVVAKVIRAFLRILCCVLKAVCRALSIPLRVLVDVATFPVYTMGAIPI
                     VCKDIAVGLGGTLSLLFDTAFGTMGGLFQIVFSVFKRIGCRVTLDSSGEL"
     exon            491..4302
                     /gene="Endod1"
                     /gene_synonym="AABR07069219.1; RGD1310444"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 acacagcagc gccgcggcag gtgtccggtc tccaggggcg gtgcagccgc agaaagctgg
       61 ggcccagcac tgcagccatc ttcggggtgg aggcggagaa ggggcgcggc cttggcccgg
      121 agccgccctg ccggagcggc gcaccgcgga cttccctgct cccgcggcgc ccggccgcgc
      181 agaggccgcc atgggctgtg cgcgctggct ggcgctgggc ggcctcctgg ccctgctggg
      241 gctgctgcag gcccggctgc tgctcccgca gcaagcgggc ttcggcgagt gcgaccgctt
      301 tttctacgcg gggaccccgc ccgccgggct ggcgaccgag gcgcacgtga ggatctgtca
      361 acgcttcgcg ggctccgagc gcttcgccac tctgtacagc ccgggccacc gcatccccgt
      421 gttctccgcg tttcgcgctg cgcgtcccgc gtcccgcagc gccgagcagc gcgggctgct
      481 ggagccgcag atcgatgacc cggacagcaa ccttgaggaa gtaattgatg aggctgacgc
      541 tgtctccgtg aacaacctgg gaagcaagca agccttgagt gcagactacc ttgactcgga
      601 ctatgaaatc ggacagctgt acccatttcc ccttaacagt gacctccaga tgtccgcatt
      661 cccactcaca aattcagttc cgatgacccg gtctttccgg gaacgatggc acatgaatct
      721 caacagcctt atggaccgag ccttgatccc acagtgcagc gacggcaaag acctgtacct
      781 cctcacgggc gccgttccct ccgaccacaa agttaagggc aaagtgactg tccccgaatt
      841 cgtctggctg gcagcctgct gtgctgtccc tggaggaggc tgggccatgg gcttcatcaa
      901 gcacacccag gacagtgatg tcatagaaga tgtgatggtg agggaccttg agaagctact
      961 tctgcataag cctcagctgt tccaggacaa ctgtggcgag acagagcaag acacagagaa
     1021 gatgaagaag attctagaag tggtcaacca agtccaagat gaggagcggt ctctgcagtc
     1081 tcaagagaac atgagtcccc tggccagcac ccgaagccag aggtctgccc tgctgtcccc
     1141 agaagcacca ccggagggag ggggcagttt tctggggaaa gtcctgggat tcctcactac
     1201 cccgttcatt aagcttttcc agttaattta ttacctcatt acagcggtct taaggaacgt
     1261 agtccatctt ctttggtttg ttgccaagca ggtgataaac ggtgttgcga gtagcctata
     1321 cggactgggg gaagctgtcg tctcatacct cgtggccatt ggacaagagt tggtgagcat
     1381 cccctggaaa gtgctcaagg tcgtggccaa ggtcatcagg gcctttctcc ggatcctctg
     1441 ctgtgtgctg aaggctgtct gtcgagctct gagcatccct ctccgagtcc ttgtggatgt
     1501 agccactttc cctgtgtata ccatgggggc cattcccatc gtgtgcaagg acattgctgt
     1561 gggcctgggt ggcaccctct cgctcctctt tgacactgct tttggcacca tgggtggcct
     1621 gtttcagatt gtttttagtg tcttcaagcg gattggctgc agggttactt tagacagttc
     1681 cggggagtta tagagctcaa aaacctagta acatccattg tggtgaattt tgatttattt
     1741 ttttttaaac agcaggtttc tgttccttgt cagctactgt attatgtttg tctggtgggc
     1801 gggtgttttt ctgcaaaaag agtatggcat actttagatt tgatctaaga gaaatgttca
     1861 ggatgggttt gatgtcctgc tccggtgtac accctgcaac aacacaggtc cacgtccacg
     1921 agtctggtga ctttagcact gcgctccaac tcacctggca tgacccaggc ttattatgta
     1981 gattaataat aaggaggatg acattaaatg ctgtgagaaa tggtatttta tgcctcccat
     2041 tgctcttgga gatttaaggc aaactagatc tgaatagtgt tgtctagtct ctgcacctct
     2101 atctcttcca ctcccacccg ggaatgagcc agcgactgct ctgttgaaat cccctcaccc
     2161 cttctggggg tagcatctgc tgtagctcag accttcacct aggcctccag ggcttgtttg
     2221 actttcattt tctcccaaag tcgaattttg ctgggtcccg ataagcattt tatgccaaac
     2281 ggaataaaat ttggatccag ccccaggtgg agcagacctg gtccctccag tgtagaggag
     2341 gcagcatgaa gcaggtgtta cgtgtccacc ggttctatta catcactggc tgacgacatt
     2401 aaaacaacga tctgcatgtt aatctactag aacttcctat ttcacagcac ctgatccatc
     2461 aagcgagtat tcaacaccat aaatcggtct gacttttctc ctgaaaacaa ttatttgtta
     2521 taactttcta ggtaatagaa aaagcgaaac atatattggt cctcttgggt agacgtatat
     2581 gtatgtacat atttaagaat tattatcttt tagaacatta tttttatagt gtgtttgagg
     2641 ctaaaaaaaa tcagtgcttc attaatgcaa gttaaatttg agagcttatt tccagttttg
     2701 atcaatccct tgctacttta aattttgcac tagaaattgt aacaaaagga gccaaacttg
     2761 ctttgtggga accaaacatt cccacagtga gaatgaattg tctagttttt tttttttttt
     2821 ctcttagcgt ttcaaggaga aaagggccaa gtgtgcactt aacttggggg gcatggccca
     2881 tggttgtctg gaaattagtt gtaaagattt ggagtctaga aagaaaacac agagggggcc
     2941 ttacctcagc tgttcccagg gagctggcac aggagaatgt gaatgtagcc agaattaaac
     3001 tttgcagaag aagctctgaa tagcaccaga ggggaccagc agcctgtaaa cttccatgca
     3061 gccgtgacta ggaatctgga cagcagactg gcccatgctc aggtagatac acacagttta
     3121 tcaagatgca cagcagtatt tgccatgagt tttcgatgtc aatgggaggg tgaaggctta
     3181 ccttggcact ggcgagtcca aacaggcacc ctcagaaggc ctgtttccag aggccaaacc
     3241 ctcatttgtt taggacccag agtcacaagg ccttgtttgt atttgacctt gtttgcaggg
     3301 ctggctggaa ggaggtcatg gtgggccaca acaccctatc acacaggggt gggcctccct
     3361 gctgtaagta ggatttgatc acctatcaaa gactccaggc tctgtccatc aactggttaa
     3421 caaaaggcca ggtattcaca gaagacattg tgctgactgc gtctcaatga agccctcttt
     3481 ccctttcagt gaatatttgc attctgagag gccctaggag ggcacccata gtgcccaatc
     3541 cccttataag gaatcacttg gaaataccca ccacccctgc tgccatattc caatgtctgg
     3601 ttatttattt ttctgtggct ttttttagaa tatgggaaat aataataaaa caaaaatata
     3661 tccttcaggt tggaggccaa gacccttcat tctggagttt cttgttggca ggtttctggt
     3721 ttactggaac tagccgtatt tatttttaaa gtcctaccag atctctgtac tgatggccta
     3781 ttctcagaag gctacttaga cctctgacgt gggggtttag gaagctgaac cctgtcttta
     3841 gcttggagat tttgctgtgg cttcattctg ttctcaggcc cttggggaag ttggccaact
     3901 ttgtcattca tggagctgtt ttcctagcct gtgtcagcca ttttctcagg cacatccccc
     3961 tcccttagtg cctttccctc ctaatgcaaa ctagggaacg aaaggaaccc aaaggaagca
     4021 tcctctgttc ttcatacatt catctgtccg gcagacgtgt gtcaagcttg cagaggtgga
     4081 aaatcctcca tctataagga gtctccagta tgatggggaa aacgtacgat accatccctg
     4141 ctgtggcgta tcatggcaag cagcacactg aggatatacg atcaggaaga cgaaggacac
     4201 ctttacagag ggcgaggcaa accatgttga ccataactgt gtacagtgct gtgtaccttg
     4261 cagatgctca ataaagccct gctgacagct cactgcttct ga
//
