LOCUS       XM_017599534            8817 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus EMAP like 6 (Eml6), transcript variant
            X1, mRNA.
ACCESSION   XM_017599534
VERSION     XM_017599534.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_017599534.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8817
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..8817
                     /gene="Eml6"
                     /note="EMAP like 6; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 39 ESTs, 17 long SRA
                     reads, 2 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 15 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:305610"
                     /db_xref="RGD:1561672"
     CDS             678..6578
                     /gene="Eml6"
                     /codon_start=1
                     /product="echinoderm microtubule-associated protein-like 6
                     isoform X1"
                     /protein_id="XP_017455023.1"
                     /db_xref="GeneID:305610"
                     /db_xref="RGD:1561672"
                     /translation="MADRTAPRCQLRLEWVYGYRGHQCRNNLYYTASKEVVYFVAGVG
                     VVYNTREHSQKFFLGHNDDIISLALHPDKTLIATGQVGKEPYICIWDSYTVQTVSILK
                     DVHTHGVACLAFDSDGQHLASVGLDAKNTVCIWDWRKGKLLASATGHSDRIFDISWDP
                     YQPNRMVSCGVKHIKFWTLCGNSLTAKRGIFGKTGDLQTILCLACAKEDITYSGALNG
                     DIYVWKGLTLVRTIQGAHSAGIFSLYACEEGFATGGRDGCIRLWDTDFKPITKIDLRE
                     TEQGYKGLSIRSVCWKADRLLAGTQDSEIFEVIVRERDKPMLILQGHCEGELWALALH
                     PKKPLAVTGSDDRSVRLWSLADHALIARCNMEEAVRSVSFSPDGSQLALGMKDGSFIV
                     LRVRDMTEVVHIKDRKEVIHEMKFSPDGSYLAVGSNDGPVDVYAVAQRYKKIGECNKS
                     LSFITHIDWSLDSKYLQTNDGAGERLFYKMPSGKPLTSKEEIKGIPWASWTCVRGPEV
                     SGIWPKYAEVIDINSVDANYNSSVLVSGDDFGLVKLFKFPCLKRGAKFRKYVGHSAHV
                     TSVRWSHDFQWVLSTGGADHAVFQWRFIPEAVSNGVSETTPQAGGADSCSEESDSDVS
                     DVPELDSDIEQETQINYDRQVYKEDLPQLKQQSKEKNHAVPFLKREKAPEDSLKLQFI
                     HGYRGYDCRNNLFYTQAGEVVYHIAAVAVVYNRQQHTQRLYLGHDDDILSLTIHPVKD
                     YVATGQVGRDAAVHVWDTQTLKCLSLLKGHHQRGVCALDFSADGKCLVSVGLDDCHSV
                     VFWDWKKGEKIATTRGHKDKIFVVKCNPHHADKLVTVGIKHIKFWQQAGGGFTSKRGS
                     FGSAGKLETMMCVSYGRMEDLVFSGAATGDIYIWKDVLLLKTVKAHDGPVFAMYALDK
                     GFVTGGKDGIVELWDDMFERCLKTYAIKRAALSTSSKGLLLEDNPSIRAITLGHGHIL
                     VGTKNGEILEIDKSGPMTLLVQGHMEGEVWGLAAHPLLPICATVSDDKTLRIWELSSQ
                     HRMLAVRKLKKGGRCCAFSPDGKALAVGLNDGSFLVVNADTVEDMLSFHHRKEMISDI
                     RFSRDTGKYLAVASHDNFVDIYNVLTSKRVGICKGASSYITHIDWDSRGKLLQVNSGA
                     KEQLFFEAPRGRRHTIRPSETEKIEWDTWTCVLGHTCEGIWPAHSDVTDVNAASLTKD
                     GSLLATGDDFGFVKLFSYPVKGQHARFKKYVGHSAHVTNVRWLHNDSVLLTVGGADTA
                     LMIWTREFVGTQESKLVDSEESDTDAEEDGGYDSDVAREKAIDYTTKIYAVSIRQMEG
                     TKPHQQLKEVSMEERQGIVKGSRPPVSRAAPQPEKLQKNSITKKKKVIEELALDHVFG
                     YRGFDCRNNLHYLNDGADIIFHTAATGVVQNLTTGGQSFYLEHTDDILCLTVNQHPKY
                     RNVVATSQIGTTPSVHIWDAVTKHTLSMLRCSHSKGVNYINFSATGKLLVSVGVDPEH
                     TITVWRWQEGTKVASRGGHLERIFVVEFRPDSDTQFVSVGVKHMKFWTLAGSALLYKK
                     GVIGSMEAARMQTMLSVAFGANNLTFTGAINGDVYVWKEHFLIRLVAKAHTGPVFTMY
                     TTLRDGLIVTGGKERPTKEGGAVKLWDQEMKRCRAFQLETGQLVECVRSVCRGKGKIL
                     VGTKDGEIIEVGEKSAASNILIDGHMEGEIWGLATHPSKDMFISASNDGTARIWDLAD
                     KKLLNKVNLGHAARCAAYSPDGEMVAIGMKNGEFIILLVNSLKVWGKKRDRKSAIQDI
                     RISPDNRFLAVGSSEHTVDFYDLTQGTSLNRIGYCKDIPSFVIQMDFSADSKYIQVST
                     GAYKRQVHEVPLGKQVTEAMVIEKITWASWTSVLGDEVIGIWPRNADKADVNCACVTH
                     DGLNIVTGDDFGLVKLFDFPCTEKFAKHKRYFGHSAHVTNIRFSYDDKYVVSTGGDDC
                     SVFVWRCL"
ORIGIN      
        1 ccaacgctgg ccccaccccc ggagcccggg aaggaggaag agctggtccc ctgcgccccg
       61 gtgacgaagc ctaaccccgg agcgcgggga ggggagggag ggcaagcaga ggatttcgct
      121 ggctggcgcg ggatcctgga tgctaggcgg gcagcagaga ctgtcagttt cggatccaag
      181 gacggtgatg gcaaagcatt aaggaggagt aaccggctgc ctgtcagatc agacctgtca
      241 cagaataaat atcaccgcct gctgcgacgc cccccgcgct cctcaaactt ggcgaactgg
      301 taatccgtgt ctggaaatgc agatctttga ttttaaaggc ggggtgaccc cggggagaac
      361 ctctcccgcc tcccgaagcc cgcaggtgca gtgaggcgtg cgcacgggcg ctggcgcccc
      421 tgaagcccgc ttgaccccgg gggaaggagt cggggagccc agcggggtct tgctgctgcg
      481 caccggcgtc ggcggctcct ctcccgcagt agcagatgat ggtggctgcc ggcgtgctgg
      541 gctgtgtctg tgcgtcgccg cggaaatcgg cgcctggcgc tgtaccctga gcccttgcag
      601 gtccgtcgca gctcgagcct tgaagaggac agaaccggcg cccggggtac ccgagggtcg
      661 cgcggtgttg gcttatcatg gcggatcgga cagctcccag atgccagctc cggctggagt
      721 gggtgtacgg gtaccggggt caccagtgcc gcaacaacct gtactacacc gccagcaagg
      781 aggtggtcta ctttgtagct ggggtagggg tggtgtacaa cacccgagag cacagccaaa
      841 aatttttcct gggacacaac gacgacatta tcagccttgc cttacaccca gataaaactc
      901 tgattgcaac tggccaagtt gggaaggagc catatatatg catatgggac tcctatactg
      961 tccagactgt gtctattctt aaagatgttc atacacatgg agttgcatgc ctggcttttg
     1021 actcggacgg acagcattta gcctctgtgg gattggatgc caaaaataca gtctgcattt
     1081 gggactggag aaagggaaaa cttctggcct ccgctactgg ccattctgac cggatttttg
     1141 atatttcctg ggatccatat cagccaaatc gaatggttag ctgtggagta aagcacataa
     1201 agttttggac actatgtgga aattccctga ctgcaaaaag aggtatattt ggcaaaacag
     1261 gagatcttca gactatcctt tgccttgcat gtgccaaaga agacatcaca tactctggtg
     1321 ctttaaatgg cgacatttat gtctggaaag ggctcaccct agtccgcact attcaaggag
     1381 cacatagtgc tggaatcttc agcctgtatg cctgtgaaga gggctttgct accggtgggc
     1441 gagacggttg catacgctta tgggacactg atttcaaacc aataaccaaa attgatctca
     1501 gggagacgga gcaaggatat aaaggcctct ctattcggag tgtgtgctgg aaagctgacc
     1561 gccttctagc aggaacccag gacagtgaga tatttgaagt cattgttcga gagcgggata
     1621 agccaatgct catccttcag ggccactgcg agggggaact ctgggctctg gccttgcacc
     1681 ctaagaagcc tctggctgtg acaggcagtg atgaccgctc tgtcaggctg tggagtttgg
     1741 cagaccatgc tttgattgcc cgctgcaata tggaggaagc agtccgtagt gtatccttca
     1801 gcccagatgg atctcagttg gccctgggca tgaaagacgg ctctttcatc gtcctccgag
     1861 tcagagatat gacagaagtg gtccatatca aggacaggaa agaagtcatt catgagatga
     1921 aattctcccc agatggctca tacctcgcag taggatccaa tgacggccct gtagatgtct
     1981 atgctgttgc ccagcgctat aagaaaatag gagaatgcaa caagtcactt agtttcatca
     2041 cgcacatcga ctggtctctg gatagtaaat acttgcaaac caatgacggt gctggggaga
     2101 gactgttcta caaaatgccg tcagggaagc ctttaacaag taaggaggaa atcaagggga
     2161 tcccctgggc ctcctggacg tgtgtgagag gccctgaagt gagtggaatt tggcccaaat
     2221 acgctgaggt tattgacatc aattcggtgg acgccaatta taacagttca gtgttggtgt
     2281 ccggagatga ttttggactg gtcaaattgt tcaagtttcc ttgtctcaaa agaggagcca
     2341 aatttagaaa gtatgtgggc cactcggcac atgtcacaag tgttcgctgg tcccacgact
     2401 tccagtgggt gctaagcaca ggaggagctg atcacgccgt ttttcagtgg agatttatcc
     2461 cagaagcagt cagcaatggt gtgtcggaaa ccacacccca ggcaggtggt gccgactctt
     2521 gtagcgaaga atctgactca gacgtctctg atgttccaga actggactct gatattgaac
     2581 aagaaactca gatcaattat gatcgccagg tttacaaaga agatctacct cagctaaagc
     2641 aacaaagtaa agagaaaaac catgcagtgc ccttcctgaa aagggagaag gctcctgagg
     2701 acagcctgaa actgcagttc atacatggtt acagaggcta tgactgtaga aacaatctgt
     2761 tctacacaca agctggagag gtggtgtacc acattgctgc cgttgctgtg gtgtacaaca
     2821 ggcaacaaca cacccagagg ctgtacctgg ggcatgatga tgacattctc agcctgacca
     2881 tccatccggt gaaggactat gtggccactg gacaggtggg aagagatgct gctgtccatg
     2941 tgtgggacac tcagactcta aagtgtctgt cattattgaa aggacaccat cagagaggag
     3001 tgtgtgctct ggatttctca gctgacggaa aatgtctcgt gtcggttggt ttagatgact
     3061 gtcacagtgt tgtgttctgg gactggaaaa agggagaaaa gatagctaca acaaggggac
     3121 acaaagataa aatatttgtg gtaaaatgta atccacacca tgctgacaag ttggtgacag
     3181 ttgggattaa gcatatcaag ttctggcaac aagcaggtgg gggtttcacc tctaaaagag
     3241 gaagttttgg aagtgctgga aagttggaaa caatgatgtg tgtttcttat gggcgaatgg
     3301 aagacctggt gttctcgggt gcagccactg gagatatcta tatctggaag gatgttttgc
     3361 tactgaagac ggtaaaggct cacgatgggc ctgtgttcgc tatgtatgcc ttggacaagg
     3421 gctttgtaac aggtggaaag gatggaattg tggaactctg ggatgatatg tttgaaagat
     3481 gcttgaagac ttatgctatc aaaagggctg cattgtcaac cagctcaaaa ggcctgcttt
     3541 tggaggataa cccttcaatt cgtgcaatca ccctggggca tggacacatt cttgtgggga
     3601 caaaaaatgg agagattcta gaaatcgata agagtggccc gatgaccctg cttgttcagg
     3661 gacacatgga aggggaagtg tgggggctgg cagcacaccc tctcctgccc atctgtgcca
     3721 cagtaagtga tgacaaaaca cttcggatct gggaattatc ctcccagcac cgcatgctgg
     3781 cagtacgaaa acttaaaaaa ggaggaagat gctgtgcctt ctcccccgat gggaaagcct
     3841 tagctgttgg attgaatgac ggaagtttct tggtggtgaa tgctgacacc gtggaagaca
     3901 tgctctcctt ccatcacaga aaagaaatga tctccgacat aagattttca agagatacag
     3961 gaaagtacct cgctgtggca tcccatgata acttcgtgga tatttacaac gtgcttacaa
     4021 gcaagagggt tggcatctgt aaaggagcgt ctagttacat cacacacatt gactgggact
     4081 ctagagggaa attactgcaa gttaattcag gtgccaaaga acagcttttc tttgaagctc
     4141 caagaggcag aagacacaca ataaggccgt cagagactga gaagatagaa tgggacacat
     4201 ggacctgtgt cctggggcac acctgtgaag gaatctggcc tgctcacagc gacgtgactg
     4261 atgtcaatgc tgccagcctt accaaagatg gctctctctt agccactggg gatgactttg
     4321 gttttgtgaa gcttttttca tatcctgtca agggacagca tgcaagattt aagaagtatg
     4381 tggggcacag cgcacacgtt accaacgtga ggtggttgca caatgactct gtgctgctca
     4441 cggtaggagg agctgacaca gccttgatga tctggaccag ggaatttgtg gggactcagg
     4501 agagcaagct ggttgacagt gaggagtcag acacagacgc agaagaagac ggaggctatg
     4561 acagcgatgt tgctagagag aaagccattg actataccac caagatctat gctgtcagca
     4621 tcaggcaaat ggaaggcacc aaaccacacc agcagctaaa agaggtgtcc atggaagaga
     4681 ggcagggaat tgtcaaggga tccagaccac ctgttagccg tgcagctccc cagcctgaga
     4741 aactccagaa gaacagcatc actaagaaaa agaaggtgat tgaggagctg gctctggacc
     4801 atgtgtttgg ctaccgagga tttgactgcc gcaacaatct gcattacctt aatgatggtg
     4861 ccgacatcat tttccacacc gcagccactg gcgttgtgca gaacctcacc acaggtggcc
     4921 agagcttcta cctggagcac acggatgaca tcctctgcct caccgtgaat cagcacccaa
     4981 agtacagaaa cgtggtggct accagccaga taggaacaac accttcagtt catatctggg
     5041 atgcagtgac caagcacacc ctttccatgc tgcggtgctc ccactccaag ggggtgaatt
     5101 acatcaactt cagcgcaacc gggaagctcc tggtgtccgt gggcgtggat ccggagcaca
     5161 ccatcactgt ctggagatgg caggaaggta ccaaggttgc cagccgaggg ggtcacctgg
     5221 aacgaatatt tgtggtggaa tttcgccctg actcagacac acaatttgtg tctgtcggag
     5281 tcaaacatat gaagttctgg actctagcgg gaagtgctct gctgtacaag aaaggggtca
     5341 tcgggtccat ggaagctgcc aggatgcaga cgatgctgtc cgtggctttt ggtgctaaca
     5401 acctcacttt taccggtgcc atcaatggag atgtctatgt gtggaaggag cacttcctca
     5461 tccggctggt ggccaaggct cacacaggtc ctgtttttac aatgtacacc accctccgag
     5521 atggacttat tgtgactggt ggaaaagaac ggccgactaa ggaaggagga gctgtaaagt
     5581 tgtgggacca ggagatgaag cgctgtcggg ccttccaact ggaaacaggg cagttggtag
     5641 aatgtgtgcg ctcggtgtgc cgcggcaagg gaaaaatctt agtaggaacc aaagatggtg
     5701 aaataattga agttggggaa aaaagtgccg cttcaaacat cctgattgat ggacacatgg
     5761 agggggagat ctggggccta gccacacacc cctccaagga catgttcatc tcagccagca
     5821 atgatggcac agcaaggatc tgggacctgg ctgacaagaa actgttaaac aaggtgaacc
     5881 tgggccacgc ggctaggtgt gcagcctata gccctgatgg ggagatggtg gccatcggca
     5941 tgaagaacgg agagttcatc atcttgctgg tgaacagcct gaaagtttgg gggaaaaaac
     6001 gagaccggaa atctgccatc caagatatca gaatcagccc agacaacaga ttcttagctg
     6061 tgggttcttc tgagcacaca gttgacttct atgaccttac tcagggcaca agtctgaacc
     6121 gcatcggcta ctgtaaagac atcccaagtt ttgtcattca gatggacttt tctgcagaca
     6181 gcaaatacat tcaggtgtca acaggagcct ataagcgcca agtgcatgaa gttcccctgg
     6241 ggaagcaggt aacagaagcc atggtcattg agaagatcac ctgggcttcc tggacaagtg
     6301 ttcttggaga tgaagtcatt ggaatctggc cacgaaatgc agacaaggct gatgtcaact
     6361 gtgcatgtgt aacccatgat ggcttgaaca ttgtcacagg ggacgacttt gggctggtga
     6421 agctctttga tttcccatgc acagaaaaat ttgccaagca taaacgttac tttggtcact
     6481 ctgctcatgt gacgaatatc cgtttctctt acgatgacaa gtatgtggtc agcactggag
     6541 gagacgactg cagtgtattt gtgtggcgat gtctgtaaac accagcgcct catgcactgc
     6601 ggctgcttct gccaagctgc ttgcaggcag tgcagggcac ctcctcgatg ccgactgctg
     6661 tgggaacaag cttcgaaccc tagtgatgta ggactctcaa aacctggact ttgcaagttt
     6721 ggtgatgcta agaaggaagg taaatgccta caatactaag actttgcttc tgttctggag
     6781 actaaaacct atacttatta taactacact aacggcgaat acaggatgaa aagtagccca
     6841 ctgataaaat ttacgtcctc agttacccta accaatatat agcttttaat ttgcattaag
     6901 acttttacaa atgtgttttg ctattgtgat tctatgtatt tcaagaatgt tcattggaca
     6961 caatgtaagt tggaagcact taagtaacag aaataccctt tgccacattt ttactttcaa
     7021 aaccaaatga gccatgtata aacaagttta aaaatgttaa ttttttaaag tttcatttgc
     7081 agttttgtat ccgttaagtg ccttcaaagt tcccagttgt gtgggctgct gcctcacccc
     7141 ccacatggtc tccttccttc acatggtgct aaaacttcaa aaatgaggag ggctatggga
     7201 ttagcagatt ccttcactat gtcctgctct gggaaagtag ttataagggg agcagcaaag
     7261 acagttcaat tccacagaaa gtagcatgga ttttatgtta gtgtcagatc ctcaacgtga
     7321 tctgtcatcc cccaaataaa atagcttcta caacaagtaa agagggaaag ctctgatgtg
     7381 tttgagtgag ctgatctgtc ttgctaaaag gctgtttggt ttacaccctc ttgggtaggg
     7441 ctgacttggc tccacttatt tcagatgatt aatgcagggt aaattcagat ttttaaaaac
     7501 ctcttgaata tattcctcac tatattattt gaatttctcc agtcagttgt aggagagaat
     7561 gtgacttgaa gactattagc tgaaagcccc tcattcagtt ctgttataca gagggcattc
     7621 actggaagaa ggctggtggg agttggagtc ctgagtgcac gcaccactga gtccttccag
     7681 tttgtgcaca aaaattctgg accttgagtt cctagctatc tgcagttgcc aatttataga
     7741 aagggtgaaa tgagcatttc cagctaaaga atagattatt aacatttacc acagaagtgc
     7801 ttcagcattc taaaaggatt agattacaca ttaagctatt ttacatgcca atctattaat
     7861 gccttacatt aacccactag caggttgctg ggtcctcagt agagccctgt gcagccctga
     7921 ttctgttttt tgtatctggt gatgctgagt gataactgtg tctgcctatc ttgtactact
     7981 gactatccat tcagacagat cttacattaa gtaaccatgt ggatgaacaa ctgattaatc
     8041 aatgatatat gtacgtatat atttgaagag caatagtgtc tgttataaag actttgaaag
     8101 tcttatttgt aaaatttata tggtataatt ttatgtatat tcataaatct tgcactgtat
     8161 tctgttaaaa tattggtgca tgagtttatt ttcaaggtat aaaataattt aaaatctttt
     8221 gttatgggtc aaataaatct cactatgtaa acatactctt ggtttgtgaa ctaaagtcct
     8281 aagagaatgt taccgtgtgt ccactctcta cacaacctat aactgtttct gctgtgcaat
     8341 tatgaaacca aaacactaaa cacaaacata agtctataag ctttattgat actttgcttt
     8401 tacagttcac aatgcattcc acagataatt cagtacggct taaaccacaa tggtataagt
     8461 cttcatttta tgatttcttg cataacaatg tttgataact gcaaacattt ggaagcatga
     8521 aattcagtcc atagaatttc agagtctgtg acaaaattaa ctatacatac agtaagtctt
     8581 tgaaatgaca ttctatattt ttgttggagt tctatatttt cttgaaaaca ggtggtaggt
     8641 agcactccta caaatacatt tctcttccta gtttatgtgc ttgggactac actgcataac
     8701 caatgactca gaggtcaagc actgtggggc agctgcaagg ttaaagatct aagctttgtg
     8761 aaacactata tatagattag gtctatattt acttatattg gcaatataac agtaaat
//
