LOCUS       NM_001401767            3176 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus EMAP like 3 (Eml3), mRNA.
ACCESSION   NM_001401767 XM_006231008
VERSION     NM_001401767.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3176)
  AUTHORS   Florea,L., Di Francesco,V., Miller,J., Turner,R., Yao,A.,
            Harris,M., Walenz,B., Mobarry,C., Merkulov,G.V., Charlab,R.,
            Dew,I., Deng,Z., Istrail,S., Li,P. and Sutton,G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Feb 24, 2022 this sequence version replaced XM_006231008.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ228620.1, SRR26643429.4893.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-265               JAXUCZ010000001.1  215255459-215255723
            266-437             JAXUCZ010000001.1  215256556-215256727
            438-695             JAXUCZ010000001.1  215256804-215257061
            696-809             JAXUCZ010000001.1  215257146-215257259
            810-877             JAXUCZ010000001.1  215258699-215258766
            878-1001            JAXUCZ010000001.1  215258917-215259040
            1002-1172           JAXUCZ010000001.1  215259266-215259436
            1173-1242           JAXUCZ010000001.1  215259604-215259673
            1243-1353           JAXUCZ010000001.1  215259760-215259870
            1354-1449           JAXUCZ010000001.1  215260403-215260498
            1450-1605           JAXUCZ010000001.1  215261930-215262085
            1606-1747           JAXUCZ010000001.1  215262228-215262369
            1748-1899           JAXUCZ010000001.1  215262732-215262883
            1900-2025           JAXUCZ010000001.1  215262963-215263088
            2026-2157           JAXUCZ010000001.1  215263165-215263296
            2158-2225           JAXUCZ010000001.1  215263854-215263921
            2226-2314           JAXUCZ010000001.1  215264458-215264546
            2315-2412           JAXUCZ010000001.1  215264674-215264771
            2413-2500           JAXUCZ010000001.1  215264907-215264994
            2501-2599           JAXUCZ010000001.1  215265906-215266004
            2600-2730           JAXUCZ010000001.1  215266236-215266366
            2731-3176           JAXUCZ010000001.1  215266450-215266895
FEATURES             Location/Qualifiers
     source          1..3176
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q43"
     gene            1..3176
                     /gene="Eml3"
                     /gene_synonym="RGD1311368"
                     /note="EMAP like 3"
                     /db_xref="GeneID:102551660"
                     /db_xref="RGD:7630023"
     exon            1..265
                     /gene="Eml3"
                     /gene_synonym="RGD1311368"
                     /inference="alignment:Splign:2.1.0"
     CDS             244..2934
                     /gene="Eml3"
                     /gene_synonym="RGD1311368"
                     /note="echinoderm microtubule associated protein like 3"
                     /codon_start=1
                     /product="echinoderm microtubule-associated protein-like
                     3"
                     /protein_id="NP_001388696.1"
                     /db_xref="GeneID:102551660"
                     /db_xref="RGD:7630023"
                     /translation="MDGTAGPGEGPAHETLQTLSQRLRVQEEEMELVKAALAEALRLL
                     RLHGPTTTLQGSGISAPTRNSITVPPGLPPTCSPSLVSRGTQTEGGLEMEPISGPPGL
                     SNGPPALQGGSEEPSGTQSEGGCSSSSGAGSPGPPGILRPVQPLQRSDTPRRNSSSSS
                     SPSERPRQKLSRKAASSANLLLRSGSTESRGNKDPLSSPGGPGSRRSNYNLEGISVKM
                     FLRGRPITMYIPSGIRSLEELPSGPPSETLSLDWVYGYRGRDSRSNLFVLRSGEVVYF
                     IACVVVLYRPGGGPGGPGGGGQRHYRGHTDCVRCLAVHPDGVRVASGQTAGVDKDGKP
                     LQPVVHIWDSETLQKLQEIGLGAFERGVGALAFSAADQGAFLCVVDDSNEHMLSVWDC
                     SRGVKLAEIKSTNDSVLAVGFSPRDSSCIVTSGKSHVHFWNWSGGTGVPGNGILARKQ
                     GVFGKYKKPKFIPCFVFLPDGNILTGDSEGNILTWGRSVSDSKTPGRGGAKETYTIVA
                     QAHAHEGSIFALCLRRDGTVLSGGGRDRRLVQWGPGLVALQEAEIPEHFGAVRAIAEG
                     LGSELLVGTTKNALLRGDLAQGFSPVIQGHTDELWGLCTHPFQNRFLTCGHDRQLCLW
                     DGEGHALAWSMDLKETGLCADFHPSGAVVVVGLNTGRWLVLDTETREIVSDVTDGNEQ
                     LSVVRYSPDGLYLAIGSHDNMIYIYSVSSCGTKSSRFGRCMGHSSFITHLDWSKDGNF
                     IMSNSGDYEILYWDVAGGCKLLRNRYESRDREWATYTCVLGFHVYGVWPDGSDGTDIN
                     SLCRSHNERVVAVADDFCKVHLFQYPCARAKAPSRMYSGHGSHVTSVRFTHDDSFLVS
                     LGGKDASIFQWRVLGAGSSGPAPATPSRTPSLSPASSLDV"
     exon            266..437
                     /gene="Eml3"
                     /gene_synonym="RGD1311368"
                     /inference="alignment:Splign:2.1.0"
     exon            438..695
                     /gene="Eml3"
                     /gene_synonym="RGD1311368"
                     /inference="alignment:Splign:2.1.0"
     exon            696..809
                     /gene="Eml3"
                     /gene_synonym="RGD1311368"
                     /inference="alignment:Splign:2.1.0"
     exon            810..877
                     /gene="Eml3"
                     /gene_synonym="RGD1311368"
                     /inference="alignment:Splign:2.1.0"
     exon            878..1001
                     /gene="Eml3"
                     /gene_synonym="RGD1311368"
                     /inference="alignment:Splign:2.1.0"
     exon            1002..1172
                     /gene="Eml3"
                     /gene_synonym="RGD1311368"
                     /inference="alignment:Splign:2.1.0"
     exon            1173..1242
                     /gene="Eml3"
                     /gene_synonym="RGD1311368"
                     /inference="alignment:Splign:2.1.0"
     exon            1243..1353
                     /gene="Eml3"
                     /gene_synonym="RGD1311368"
                     /inference="alignment:Splign:2.1.0"
     exon            1354..1449
                     /gene="Eml3"
                     /gene_synonym="RGD1311368"
                     /inference="alignment:Splign:2.1.0"
     exon            1450..1605
                     /gene="Eml3"
                     /gene_synonym="RGD1311368"
                     /inference="alignment:Splign:2.1.0"
     exon            1606..1747
                     /gene="Eml3"
                     /gene_synonym="RGD1311368"
                     /inference="alignment:Splign:2.1.0"
     exon            1748..1899
                     /gene="Eml3"
                     /gene_synonym="RGD1311368"
                     /inference="alignment:Splign:2.1.0"
     exon            1900..2025
                     /gene="Eml3"
                     /gene_synonym="RGD1311368"
                     /inference="alignment:Splign:2.1.0"
     exon            2026..2157
                     /gene="Eml3"
                     /gene_synonym="RGD1311368"
                     /inference="alignment:Splign:2.1.0"
     exon            2158..2225
                     /gene="Eml3"
                     /gene_synonym="RGD1311368"
                     /inference="alignment:Splign:2.1.0"
     exon            2226..2314
                     /gene="Eml3"
                     /gene_synonym="RGD1311368"
                     /inference="alignment:Splign:2.1.0"
     exon            2315..2412
                     /gene="Eml3"
                     /gene_synonym="RGD1311368"
                     /inference="alignment:Splign:2.1.0"
     exon            2413..2500
                     /gene="Eml3"
                     /gene_synonym="RGD1311368"
                     /inference="alignment:Splign:2.1.0"
     exon            2501..2599
                     /gene="Eml3"
                     /gene_synonym="RGD1311368"
                     /inference="alignment:Splign:2.1.0"
     exon            2600..2730
                     /gene="Eml3"
                     /gene_synonym="RGD1311368"
                     /inference="alignment:Splign:2.1.0"
     exon            2731..3176
                     /gene="Eml3"
                     /gene_synonym="RGD1311368"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtgctgcggc gcagtggctc tggacggccc cgtcactgca ccccgggagc ccacccgggg
       61 agagtaagag gcccagctcc acagcgcccc ctccaattcc tgtccccacg ctcgacggcg
      121 cccccgaggg gtggcactgc tcctctccgc gcgcgccctg gtgcttcctt cccctctcct
      181 tagccatggt ccccccggct tagacgcctc cgacgccgct gctcggagca acgcgggggc
      241 cggatggacg gaactgcggg gcccggtgag ggccctgctc atgagaccct gcagaccctg
      301 agccagcggc ttcgggtgca ggaagaagag atggaactgg taaaggcagc cttggcagaa
      361 gcccttcgcc tgctgcggct gcacggcccc accacaacct tgcagggctc cggcatatca
      421 gctccaacaa ggaacagcat tacagtcccc ccaggactgc cacctacgtg cagcccttcc
      481 ttggtgagcc gaggcacgca aacagaggga ggattggaga tggagccaat ctctggaccg
      541 cctggcctga gcaatgggcc tccagctctt caggggggca gtgaagagcc tagcgggacc
      601 cagtctgaag gagggtgcag cagcagcagt ggggcaggct cccctggacc cccaggaatc
      661 ctcaggcctg tgcagcccct gcagcgttct gacacgcccc gaagaaattc ctcctcctcc
      721 tcctccccct cagagcggcc caggcagaaa ctctccagga aggcagcttc ctcagccaac
      781 ctgctattgc ggtcagggag cacagagagc cggggcaaca aagaccccct gtccagtcct
      841 gggggtcccg gatctcggag gagcaattat aacttagaag gcatttccgt aaagatgttc
      901 cttcgtggcc gtcccatcac catgtacatt ccgtctggca ttcgaagcct tgaggagctg
      961 cccagtggcc caccctcgga gaccctgagc cttgactggg tttatgggta taggggtcgt
     1021 gactctcgct ctaatctatt tgtgctgcgc tctggggagg tggtctactt tattgcctgt
     1081 gtagtggtgc tgtaccgacc tgggggaggc ccagggggtc ctggaggtgg cggccagaga
     1141 cactaccggg gtcatacaga ctgcgttcga tgccttgctg ttcaccccga tggtgtccgt
     1201 gtagcctcag gacagacagc tggagtggac aaggatggaa agcccctgca gcccgtggtt
     1261 catatctggg actcagagac acttcaaaaa ctgcaggaga ttggactggg tgcctttgag
     1321 cgtggcgtgg gggccttggc tttttcagca gcggatcaag gtgcttttct ttgtgtggtg
     1381 gatgattcca acgagcacat gctgtctgtg tgggactgta gccggggagt gaagctggct
     1441 gagatcaaga gtacaaatga ctcagtcctc gctgttggct tcagccctcg tgacagcagc
     1501 tgtattgtca ccagtggaaa atctcatgtc cacttttgga actggagtgg tggaacaggg
     1561 gttcctggga atgggatcct cgcccggaag cagggtgttt ttgggaaata caagaaaccc
     1621 aagtttatcc cttgctttgt gttcctccct gatggaaaca tcctcactgg ggactccgag
     1681 gggaacattc ttacctgggg tcgaagtgtc tctgattcca agaccccagg caggggtggg
     1741 gccaaagaga cctacacaat cgtggcccag gcccatgctc acgaggggtc catctttgcc
     1801 ctgtgtctcc gacgggatgg gacagtgctg agtggtggtg ggcgggaccg acggctggta
     1861 cagtgggggc cagggttggt ggccctccag gaagctgaga ttccagaaca ctttggagct
     1921 gtgagggcca ttgctgaagg gcttggctct gagctgctgg tgggaaccac caagaatgca
     1981 ttactgaggg gagatctggc tcagggcttc tctcctgtta tccagggcca cactgatgag
     2041 ctctgggggc tgtgtacgca tcccttccag aaccgcttcc tcacctgtgg ccatgaccgg
     2101 cagctctgcc tgtgggatgg ggaaggccat gcactggcct ggagcatgga cctgaaggag
     2161 acgggtttat gtgctgactt ccacccaagt ggggcagttg tggtcgtagg actgaacaca
     2221 gggaggtggt tggttttgga cacagagact agagagattg tgtctgacgt cactgatggc
     2281 aatgaacagc tctcagttgt ccggtatagc ccagatgggt tgtacctggc tatcggctcc
     2341 catgacaaca tgatctacat ctatagtgtt tccagttgtg gcacaaagtc cagccgcttt
     2401 ggcagatgta tggggcactc cagttttatc actcaccttg actggtccaa ggatgggaat
     2461 ttcatcatgt ccaattctgg ggattatgag attctttact gggatgtggc tggaggctgc
     2521 aagctgctaa ggaatcgcta cgaaagcaga gaccgtgagt gggccaccta tacctgtgtg
     2581 ctgggcttcc acgtctatgg tgtgtggcct gatggctctg acgggacaga catcaactcc
     2641 ctttgccgct cccacaatga acgggtggtg gccgtggcag acgacttctg caaagtacac
     2701 ctctttcagt acccatgcgc tcgagccaag gctccaagtc gtatgtactc aggccatggc
     2761 agccatgtga ctagtgtccg gttcacacac gacgactcat tccttgtctc cttaggtggc
     2821 aaggatgcta gcatctttca gtggcgagtg ctgggggcag ggagctctgg acccgctcct
     2881 gccacgccat ctagaactcc ctctctgtcc cctgcctcct ccctggacgt gtgattgatg
     2941 ccggaaggtc ttgtccttct ggtactgtgg tctggcccca ccctggccaa aacccctagg
     3001 accaaggaca gtcttttcct gggctggctt tttctttgac ttaatacatt cccaattgcg
     3061 cattttcctg gaggggtgaa ccaccccatt gcacacaata acagacttgc tggttgagcc
     3121 gggcaattca actctgacac tctgcccggt gaggggcaat aaaaagaaaa aagtca
//
