LOCUS       NM_001004228            1421 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus endomucin (Emcn), mRNA.
ACCESSION   NM_001004228 XM_215710
VERSION     NM_001004228.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1421)
  AUTHORS   Shuwen,H., Xi,Y., Miao,D., Jiamin,X., Jing,Z. and Weili,G.
  TITLE     Nine Genes Mediate the Therapeutic Effects of Iodine-131
            Radiotherapy in Thyroid Carcinoma Patients
  JOURNAL   Dis Markers 2020, 9369341 (2020)
   PUBMED   32626543
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1421)
  AUTHORS   Morgan,S.M., Samulowitz,U., Darley,L., Simmons,D.L. and
            Vestweber,D.
  TITLE     Biochemical characterization and molecular cloning of a novel
            endothelial-specific sialomucin
  JOURNAL   Blood 93 (1), 165-175 (1999)
   PUBMED   9864158
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC079155.1.
            
            On Sep 10, 2004 this sequence version replaced XM_215710.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC079155.1, EV765755.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5756307, SAMEA5760384
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1421
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q43"
     gene            1..1421
                     /gene="Emcn"
                     /note="endomucin"
                     /db_xref="GeneID:295490"
                     /db_xref="RGD:1303218"
     exon            1..164
                     /gene="Emcn"
                     /inference="alignment:Splign:2.1.0"
     CDS             92..844
                     /gene="Emcn"
                     /note="sialomucin"
                     /codon_start=1
                     /product="endomucin precursor"
                     /protein_id="NP_001004228.1"
                     /db_xref="GeneID:295490"
                     /db_xref="RGD:1303218"
                     /translation="MRLLQVTALFFLLSNSLCRGENSKALTETSTTKASATTPDMVSI
                     TNKSTGGTPPKGTTNSATPKTPLMPALDSPTTPKHETTTRGVIKNEVSTIKTTVANPT
                     ISNAVSTLSSPQNKTENQSSIRTTEISGTNQLPDDQKPKTTETPSASLTTAKTISQIQ
                     DTEDGKITATTSTTPSYSSVILPVVIALIVITVLVFTLVGLYRICWKRDPGTPESGND
                     QPQSDKESVKLLTVKTISHESGEHSAQGKAKN"
     exon            165..257
                     /gene="Emcn"
                     /inference="alignment:Splign:2.1.0"
     exon            258..329
                     /gene="Emcn"
                     /inference="alignment:Splign:2.1.0"
     exon            330..440
                     /gene="Emcn"
                     /inference="alignment:Splign:2.1.0"
     exon            441..479
                     /gene="Emcn"
                     /inference="alignment:Splign:2.1.0"
     exon            480..572
                     /gene="Emcn"
                     /inference="alignment:Splign:2.1.0"
     exon            573..626
                     /gene="Emcn"
                     /inference="alignment:Splign:2.1.0"
     exon            627..722
                     /gene="Emcn"
                     /inference="alignment:Splign:2.1.0"
     exon            723..747
                     /gene="Emcn"
                     /inference="alignment:Splign:2.1.0"
     exon            748..809
                     /gene="Emcn"
                     /inference="alignment:Splign:2.1.0"
     exon            810..883
                     /gene="Emcn"
                     /inference="alignment:Splign:2.1.0"
     exon            884..1393
                     /gene="Emcn"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ttccatttgc tcatacggcc tggtcaggct gggaggaatc gctccctgcc ttacccggga
       61 gagcaaagcc actgagaaca tcccgggcac catgcggctg cttcaagtga ctgctctctt
      121 cttccttttg tccaacagtc tatgccgtgg tgagaacagc aaagcactga cagaaacatc
      181 cacaacaaaa gcatcggcta caacaccaga catggtgtca atcacaaaca aatcaacagg
      241 cggaacacct cctaaaggaa cgaccaacag tgcaacaccc aaaacacctt tgatgccagc
      301 acttgattca ccgacaacac caaaacatga aacaacaact cgtggtgtca taaagaatga
      361 agtttccact ataaaaacaa cagtggcaaa tcctaccatt tcgaatgctg tttcaacact
      421 ctcaagtccc cagaacaaga cggagaatca gagttcaatc aggacaacag aaatatcagg
      481 taccaatcaa ctgccagatg accaaaaacc aaagacgacc gagacgccct ctgcatcgct
      541 aacaactgca aaaaccatct cacagattca ggatactgag gatgggaaga tcacagccac
      601 tacatcaacc accccctcct attccagtgt tattttgccc gtggttatcg cgctgattgt
      661 tataacagtc ttggtgttta ctctggtggg cttgtatcga atatgctgga aaagagaccc
      721 aggcactcca gaaagtggaa atgatcagcc tcagtctgat aaagagagtg taaagctgct
      781 caccgttaag acaatctctc atgagtctgg cgaacactct gcacagggga aagccaagaa
      841 ctgacatcgt gatggatcct ccttacacct gggcaataaa taagcttcat cttcagcttc
      901 taaactccaa gggtggagaa aagaaagtcc tcggaaccga tacaatttcc aatcttctca
      961 ccagtctacg cgagttgcct gtcccagcaa aggaatgaca tactatcacc tgatagaatc
     1021 ataaagaact ctggacatct tctgtgtgag acgtagaaaa tcaaacaact ctagttttca
     1081 aggacttttc taggaggaac cgtgatcccc cagcctgggc aggtagcctg ctgagtttag
     1141 acatgcctta gctgagtcta gacttccggg ttttatagcc gcgatctgtg gagacttgcc
     1201 tgttttcttt gtgttcttat gttagccatt gtcggtattt attgtttccc actgtgttaa
     1261 tgcagggcgt tttgcaagtg tgttaataaa tgttaagtag aaatcatgcc atgtttctct
     1321 gtagagacag gtatgttatt catgttttca ggtgttactt ttaataaatc atggctgtac
     1381 tcagcatgct aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//
