LOCUS       NM_001008296             845 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus ER membrane protein complex subunit 9 (Emc9),
            mRNA.
ACCESSION   NM_001008296 XM_214198
VERSION     NM_001008296.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 845)
  AUTHORS   Christianson,J.C., Olzmann,J.A., Shaler,T.A., Sowa,M.E.,
            Bennett,E.J., Richter,C.M., Tyler,R.E., Greenblatt,E.J.,
            Harper,J.W. and Kopito,R.R.
  TITLE     Defining human ERAD networks through an integrative mapping
            strategy
  JOURNAL   Nat Cell Biol 14 (1), 93-105 (2011)
   PUBMED   22119785
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC086432.1.
            
            On Dec 16, 2004 this sequence version replaced XM_214198.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC086432.1, CO383859.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..845
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /map="15p13"
     gene            1..845
                     /gene="Emc9"
                     /gene_synonym="Fam158a; RGD1308113"
                     /note="ER membrane protein complex subunit 9"
                     /db_xref="GeneID:290224"
                     /db_xref="RGD:1308113"
     exon            1..351
                     /gene="Emc9"
                     /gene_synonym="Fam158a; RGD1308113"
                     /inference="alignment:Splign:2.1.0"
     CDS             154..774
                     /gene="Emc9"
                     /gene_synonym="Fam158a; RGD1308113"
                     /note="UPF0172 protein FAM158A; family with sequence
                     similarity 158, member A"
                     /codon_start=1
                     /product="ER membrane protein complex subunit 9"
                     /protein_id="NP_001008297.1"
                     /db_xref="GeneID:290224"
                     /db_xref="RGD:1308113"
                     /translation="MGEVEISARAYGKMCLHASRYPHAAVNGLLLAPATRSGECLCLT
                     DCVPLFHSHLALSVMLEVALNQVDVWATQAGLVVAGYYHANAVLDDQSPGPLALKIAG
                     RIAEFFPNAVLIMLDNKKLVTWPRVPPVIVLENQGLQWVPKDKNLVMWRDWEESRQMV
                     GALLEGRAHQHLVDFDCHLDDIRQDWTNQRLNTQITQWSGSTDGHA"
     exon            352..428
                     /gene="Emc9"
                     /gene_synonym="Fam158a; RGD1308113"
                     /inference="alignment:Splign:2.1.0"
     exon            429..498
                     /gene="Emc9"
                     /gene_synonym="Fam158a; RGD1308113"
                     /inference="alignment:Splign:2.1.0"
     exon            499..593
                     /gene="Emc9"
                     /gene_synonym="Fam158a; RGD1308113"
                     /inference="alignment:Splign:2.1.0"
     exon            594..818
                     /gene="Emc9"
                     /gene_synonym="Fam158a; RGD1308113"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 caaattctat actgctaggg ggcaggctgc agacagaggt cgcctagtgt caggggcatc
       61 ttacagccaa gtgagaaggg agacggcaca gggtgaggcc aagttctctc gggtggtcag
      121 ggagcttcac tggtcgggat cggcgtgctc gctatggggg aggtggagat ctccgcccga
      181 gcctacggga agatgtgtct gcacgcctct cggtacccac acgctgctgt caacgggttg
      241 ttgctggctc ccgcgacgcg gtccggagaa tgtctctgcc tcaccgactg tgtgcccctc
      301 ttccacagcc atctggcctt gtccgtcatg ctggaggtcg cgctcaacca ggtggatgtg
      361 tgggcaacgc aggccggtct ggtggtagct gggtactacc atgccaatgc ggttttggat
      421 gatcagagcc ctgggcctct ggccttgaaa atcgctgggc gaattgcaga attcttcccc
      481 aacgcagtgc ttattatgct ggataataag aaactggtaa cttggcctcg tgtacctcca
      541 gtcattgtcc tggagaacca gggtcttcag tgggtgccta aggacaagaa cttagtgatg
      601 tggagagatt gggaggagtc acggcagatg gtgggagcac tgctggaggg ccgggcccac
      661 cagcatcttg tggactttga ctgccacctt gatgacattc ggcaggactg gaccaaccag
      721 cggctcaaca ctcaaatcac tcaatggagt ggttccaccg atggacatgc ctaagccaga
      781 ggggtccaaa tacaataaag acgtgggctg gtgggcaaaa aaaaaaaaaa aaaaaaaaaa
      841 aaaaa
//
