LOCUS       NM_001012165            1029 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus ER membrane protein complex subunit 8 (Emc8),
            mRNA.
ACCESSION   NM_001012165 XM_341703
VERSION     NM_001012165.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1029)
  AUTHORS   Christianson,J.C., Olzmann,J.A., Shaler,T.A., Sowa,M.E.,
            Bennett,E.J., Richter,C.M., Tyler,R.E., Greenblatt,E.J.,
            Harper,J.W. and Kopito,R.R.
  TITLE     Defining human ERAD networks through an integrative mapping
            strategy
  JOURNAL   Nat Cell Biol 14 (1), 93-105 (2011)
   PUBMED   22119785
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1029)
  AUTHORS   Ghosh,D., Lippert,D., Krokhin,O., Cortens,J.P. and Wilkins,J.A.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
REFERENCE   3  (bases 1 to 1029)
  AUTHORS   Mootha,V.K., Bunkenborg,J., Olsen,J.V., Hjerrild,M.,
            Wisniewski,J.R., Stahl,E., Bolouri,M.S., Ray,H.N., Sihag,S.,
            Kamal,M., Patterson,N., Lander,E.S. and Mann,M.
  TITLE     Integrated analysis of protein composition, tissue diversity, and
            gene regulation in mouse mitochondria
  JOURNAL   Cell 115 (5), 629-640 (2003)
   PUBMED   14651853
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC089914.1.
            
            On Feb 11, 2005 this sequence version replaced XM_341703.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC089914.1, CO386474.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1029
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /map="19q12"
     gene            1..1029
                     /gene="Emc8"
                     /gene_synonym="Cox4nb; DD6A4-2(5); Noc4"
                     /note="ER membrane protein complex subunit 8"
                     /db_xref="GeneID:361425"
                     /db_xref="RGD:1311219"
     exon            1..334
                     /gene="Emc8"
                     /gene_synonym="Cox4nb; DD6A4-2(5); Noc4"
                     /inference="alignment:Splign:2.1.0"
     CDS             113..736
                     /gene="Emc8"
                     /gene_synonym="Cox4nb; DD6A4-2(5); Noc4"
                     /note="neighbor of Cox4; COX4 neighbor"
                     /codon_start=1
                     /product="ER membrane protein complex subunit 8"
                     /protein_id="NP_001012165.1"
                     /db_xref="GeneID:361425"
                     /db_xref="RGD:1311219"
                     /translation="MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAERQRPRKEHPPG
                     AGNHTLFVDCIPLFHGTLALTPMLEVALTLIDSWCKDNSYVIAGYYQANERVKDASPN
                     QVAEKVASRIAEGFSDAALIMVDNAKFTMDCAAPTIHVYEQHENRWRCRDPHHDYCED
                     WPEAQRISASLLDSRSYETLVDFDNHLDDIRSDWTNPEINKAVLHLC"
     exon            335..411
                     /gene="Emc8"
                     /gene_synonym="Cox4nb; DD6A4-2(5); Noc4"
                     /inference="alignment:Splign:2.1.0"
     exon            412..481
                     /gene="Emc8"
                     /gene_synonym="Cox4nb; DD6A4-2(5); Noc4"
                     /inference="alignment:Splign:2.1.0"
     exon            482..576
                     /gene="Emc8"
                     /gene_synonym="Cox4nb; DD6A4-2(5); Noc4"
                     /inference="alignment:Splign:2.1.0"
     exon            577..1005
                     /gene="Emc8"
                     /gene_synonym="Cox4nb; DD6A4-2(5); Noc4"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggcggactga ggcgggaggc tgtagctggt ggtgggagct catcttagcg tgcagtgggg
       61 tcgtgtttcg tactgtggtg cgttggtcgc gacgcgacca gctaggctca gcatgcctgg
      121 cgtgaagctg accacccagg cctactgcaa gatggtgcta cacggcgcca agtacccgca
      181 ctgcgccgtc aacgggcttc tggtggcaga gaggcagagg ccgcgcaagg aacatcctcc
      241 cggcgcgggc aaccacactc tcttcgtgga ctgcatcccg ctcttccacg gcacgctggc
      301 tctgacgccc atgctggagg tggcgctcac cctaattgac tcatggtgca aagacaacag
      361 ctatgtgatc gccggctatt accaagctaa tgaacgtgtg aaggatgcca gcccaaacca
      421 ggtggcagag aaggtggcct ccaggatcgc agagggcttc agtgatgctg cactcatcat
      481 ggtggacaac gccaagttca cgatggactg tgcagcgccc acgatccacg tgtatgagca
      541 acacgagaac aggtggcggt gccgagaccc acatcacgac tactgtgaag attggccgga
      601 ggctcagagg atctccgctt cgctcctgga cagccgctcc tatgagacac ttgtagattt
      661 tgataatcac ctggatgaca ttcggagcga ctggacaaac ccagagatca acaaagcagt
      721 tctacacctg tgctagacaa ggaccacgac tggagactcc actacagaga agatgaaagc
      781 gtatttttaa atgtagaggc atagtgggtt agcccatggg aagctgcaag tctgtaatgt
      841 gtgccttgga acgggtgcag ccggcatcct tcagggcggg gctgtggaga gagagctgtg
      901 ggctatctgg gctttgggtt cttagtcctg tgctgcccaa ccctgcccat caaagctctt
      961 tctgcttgtc ccaggttatt cccattaaac agttgtagcc ttttaaaaaa aaaaaaaaaa
     1021 aaaaaaaaa
//
