LOCUS       NM_001008355            1924 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus ER membrane protein complex subunit 3 (Emc3),
            mRNA.
ACCESSION   NM_001008355 XM_232272
VERSION     NM_001008355.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1924)
  AUTHORS   Christianson,J.C., Olzmann,J.A., Shaler,T.A., Sowa,M.E.,
            Bennett,E.J., Richter,C.M., Tyler,R.E., Greenblatt,E.J.,
            Harper,J.W. and Kopito,R.R.
  TITLE     Defining human ERAD networks through an integrative mapping
            strategy
  JOURNAL   Nat Cell Biol 14 (1), 93-105 (2011)
   PUBMED   22119785
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC085846.1.
            
            On Dec 16, 2004 this sequence version replaced XM_232272.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC085846.1, FQ220446.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1924
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q42"
     gene            1..1924
                     /gene="Emc3"
                     /gene_synonym="Pob; RGD1311566; Tmem111"
                     /note="ER membrane protein complex subunit 3"
                     /db_xref="GeneID:312640"
                     /db_xref="RGD:1311566"
     exon            1..266
                     /gene="Emc3"
                     /gene_synonym="Pob; RGD1311566; Tmem111"
                     /inference="alignment:Splign:2.1.0"
     CDS             112..897
                     /gene="Emc3"
                     /gene_synonym="Pob; RGD1311566; Tmem111"
                     /note="partial optokinetic response b; 30 kDa protein;
                     transmembrane protein 111"
                     /codon_start=1
                     /product="ER membrane protein complex subunit 3"
                     /protein_id="NP_001008356.1"
                     /db_xref="GeneID:312640"
                     /db_xref="RGD:1311566"
                     /translation="MAGPELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKL
                     TQEQVSDSQVLIRSRVLRENGKYIPKQSFLTRKYYFNNPEDGFFKKTKRKVVPPSPMT
                     DPTMLTDMMKGNVTNVLPMILIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLT
                     LDASWVSSASWYFLNVFGLRSIYSLILGQDNAADQSRMMQEQMTGAAMAMPADTNKAF
                     KTEWEALELTDHQWALDDVEEELMARDLHFEGMFKKELQTSIF"
     exon            267..324
                     /gene="Emc3"
                     /gene_synonym="Pob; RGD1311566; Tmem111"
                     /inference="alignment:Splign:2.1.0"
     exon            325..418
                     /gene="Emc3"
                     /gene_synonym="Pob; RGD1311566; Tmem111"
                     /inference="alignment:Splign:2.1.0"
     exon            419..523
                     /gene="Emc3"
                     /gene_synonym="Pob; RGD1311566; Tmem111"
                     /inference="alignment:Splign:2.1.0"
     exon            524..605
                     /gene="Emc3"
                     /gene_synonym="Pob; RGD1311566; Tmem111"
                     /inference="alignment:Splign:2.1.0"
     exon            606..685
                     /gene="Emc3"
                     /gene_synonym="Pob; RGD1311566; Tmem111"
                     /inference="alignment:Splign:2.1.0"
     exon            686..768
                     /gene="Emc3"
                     /gene_synonym="Pob; RGD1311566; Tmem111"
                     /inference="alignment:Splign:2.1.0"
     exon            769..1898
                     /gene="Emc3"
                     /gene_synonym="Pob; RGD1311566; Tmem111"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctaagctgcc ccagattcca caccagcttg actgaggggc gggtgaaggc cccgatccaa
       61 aatccgggag gaacgcaaca cctcccaacc cgcagccaac tttcagcgaa gatggcgggg
      121 cccgagctgc tgcttgactc taacatccgc ctctgggtgg tcctgcccat cgttataatc
      181 accttcttcg tgggcatgat ccgccactac gtgtcaatcc tactgcagag cgataagaag
      241 ctcacccagg aacaagtgtc ggacagtcag gtcctaattc gaagcagagt cctcagagaa
      301 aatggaaaat acattcccaa gcagtctttc ttaacacgga aatattactt caacaaccca
      361 gaggatggat ttttcaaaaa aaccaaaagg aaggttgtgc caccttcacc tatgacagac
      421 cccaccatgc tcacagacat gatgaaaggg aacgtcacca atgtcctccc aatgatcctt
      481 atcggcggat ggatcaacat gacattctca ggctttgtca caactaaggt cccgtttcca
      541 ctgacgcttc gcttcaagcc tatgcttcag cagggaatag agctgctcac actagacgcg
      601 tcctgggtga gttctgcatc ctggtatttc ctcaatgtgt ttggactccg gagcatttat
      661 tctctaatcc tgggccaaga caatgctgct gaccagtcac gaatgatgca ggagcagatg
      721 acaggagcag caatggccat gcctgcggac accaacaaag ctttcaagac agagtgggaa
      781 gctttggaac tgacagatca ccagtgggcg ctcgatgatg tggaagaaga actcatggcc
      841 agagacctcc actttgaagg catgttcaaa aaggagctgc agacgtccat attctaaccg
      901 cacgggggtc agctgtgtcc ggaacttgca gtagcactta cccttgtaac ttccgtggag
      961 ctggagcctc tgagaatgaa aaggaggggc tggcaggtgc agcgaggctc gttcttgtct
     1021 gagctggggc cccctttatg ttggacactt aggaaaagga gttgcgggtg actgcggtct
     1081 tagagtttgt gattgttcct tcaggtggac gtcagagaaa ggggagaccc catgctactg
     1141 agaatatctc aacccttagc agaacctccg tgctcagaaa gagcatgtca gttatagcag
     1201 tcacgatgtc ggtcagcctg acttccagcc acagtaaact cctgttttct taggatccaa
     1261 acacaccctg cattttacct ttaatttctt gtttgtattt tttaactttc tttacatgcg
     1321 taatatacat tttctctacc acaatttaga aactatggct gagcagcata gagctccctg
     1381 cagtgttcac ttgagcctac agaatgacgc agagagccag tgtggcccaa cattgctgaa
     1441 ataaactctt tatagagtgg atccccaggg ccggggcaga ctcagcaaac ttttcatatc
     1501 tcttcatatt tagtccagtg aaaacaggtg gccctgaggc acagccagac tctcaagtgc
     1561 ctttgggctc atcagagaca ggttacataa tacaagttct tgattggaac ttgagaaaat
     1621 atcaactcta ttggccagtc aatggtgctg tactgtaaat ggctactcat ttgaacgaat
     1681 gacctcatcc cagttcctct gggcaggaaa gaacttacca ctgttggcaa gaaggcagtt
     1741 tctgttggat atatagatca aggtgcccag gagtcctctg accagggaag tgacagggtg
     1801 ccatttctgt accaagaggt gggtgtgact gcatgttaag cactgtagcc aagaacaagc
     1861 gactcttgac tcttaattaa acagccctgt tttctcttaa aaaaaaaaaa aaaaaaaaaa
     1921 aaaa
//
