LOCUS       NM_001001718            1397 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus elongator acetyltransferase complex subunit 5
            (Elp5), mRNA.
ACCESSION   NM_001001718 XM_213356
VERSION     NM_001001718.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1397)
  AUTHORS   Close,P., Gillard,M., Ladang,A., Jiang,Z., Papuga,J., Hawkes,N.,
            Nguyen,L., Chapelle,J.P., Bouillenne,F., Svejstrup,J., Fillet,M.
            and Chariot,A.
  TITLE     DERP6 (ELP5) and C3ORF75 (ELP6) regulate tumorigenicity and
            migration of melanoma cells as subunits of Elongator
  JOURNAL   J Biol Chem 287 (39), 32535-32545 (2012)
   PUBMED   22854966
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AY623900.1.
            
            On Aug 30, 2004 this sequence version replaced XM_213356.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY623900.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN16676810 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1397
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q24"
     gene            1..1397
                     /gene="Elp5"
                     /gene_synonym="DERP6; Rai12"
                     /note="elongator acetyltransferase complex subunit 5"
                     /db_xref="GeneID:287446"
                     /db_xref="RGD:1303303"
     exon            1..307
                     /gene="Elp5"
                     /gene_synonym="DERP6; Rai12"
                     /inference="alignment:Splign:2.1.0"
     CDS             208..1164
                     /gene="Elp5"
                     /gene_synonym="DERP6; Rai12"
                     /note="dermal papilla-derived protein 6 homolog; S-phase 2
                     protein; dermal papilla derived protein 6; retinoic acid
                     induced 12; retinoic acid-induced protein 12"
                     /codon_start=1
                     /product="elongator complex protein 5"
                     /protein_id="NP_001001718.1"
                     /db_xref="GeneID:287446"
                     /db_xref="RGD:1303303"
                     /translation="MPRLLSGDDIRRRPEASEMLDSLLATGGLVLLRDSVEWEGRGLL
                     KALIKKSALRGEQVHVLGCEVSEEEFREGLGSDVNSRLVYHDLFRDPLNWSQPGEAAP
                     EGPLKALRSMCRRTDRGSVTIALDSLSWLLCHIPCVTLCQALHALSQRNVDPGDNPLI
                     EQVRVLGLLHEELHGPGPVGAVSSLAHTEVTLSGKMDQTSASILCRRPQQRATYQTWW
                     FSILPDFSLDLHEGLPLHSELHRDPHTTQVDPASHLTFNLHLSKKEREAKDSLTLPFQ
                     FSSEKQQALLHPVPGQTTGRIFYEPDAFDDVDQEDPDDDLDI"
     exon            308..368
                     /gene="Elp5"
                     /gene_synonym="DERP6; Rai12"
                     /inference="alignment:Splign:2.1.0"
     exon            369..449
                     /gene="Elp5"
                     /gene_synonym="DERP6; Rai12"
                     /inference="alignment:Splign:2.1.0"
     exon            450..670
                     /gene="Elp5"
                     /gene_synonym="DERP6; Rai12"
                     /inference="alignment:Splign:2.1.0"
     exon            671..852
                     /gene="Elp5"
                     /gene_synonym="DERP6; Rai12"
                     /inference="alignment:Splign:2.1.0"
     exon            853..948
                     /gene="Elp5"
                     /gene_synonym="DERP6; Rai12"
                     /inference="alignment:Splign:2.1.0"
     exon            949..1049
                     /gene="Elp5"
                     /gene_synonym="DERP6; Rai12"
                     /inference="alignment:Splign:2.1.0"
     exon            1050..1383
                     /gene="Elp5"
                     /gene_synonym="DERP6; Rai12"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccatcccact gataactgtt ccaacggcct ttctcgcccc agtcatggtg caagaacaga
       61 ttaaggatgt cgtctctagg actgtgtaca gaggctcagg agcggcccct ccgagtaagc
      121 cttctgagaa tactgaacat aaaaaaagaa gaaaacaggg tctgcgttcc ggactttgcg
      181 gtcctttaag gttggacgca atcctcaatg ccccgcctcc ttagtggtga cgacatcaga
      241 aggcgtcctg aggcgtcaga gatgctggac tcgttgttgg ccaccggtgg tttggtgctt
      301 cttcgagatt ccgtggagtg ggaggggcgt ggtctcctga aggctcttat caagaaatct
      361 gcacttcgtg gggagcaagt ccacgttctg ggctgtgagg tgagtgaaga agagtttcgc
      421 gaaggtctcg gctctgatgt caacagccgc ctagtttacc atgacctctt cagagaccct
      481 ctgaactggt cacaacctgg ggaagctgct cctgaaggac ctctaaaagc cttgagatcc
      541 atgtgcagaa ggacagaccg tggctctgtc accatcgccc ttgactctct cagctggctg
      601 ctatgtcaca ttccctgtgt tacactctgt caagccctac atgctctgag ccagcgaaat
      661 gtagacccag gtgataaccc cctgatagag caggtgcggg tcctgggcct cctgcatgaa
      721 gagcttcatg gtcctggccc cgtgggagca gtgagcagcc ttgctcacac agaggtgact
      781 ctgagtggta aaatggacca gacttcagcc tccatcctct gtcgaaggcc ccaacaacgt
      841 gcaacttacc agacttggtg gttctccatt cttcctgact tcagcctgga tctccatgaa
      901 ggtcttcccc tccattctga gctacaccgg gatcctcaca caacccaggt ggatcctgcc
      961 agtcatttga cctttaacct tcacttatcc aagaaagaaa gagaagccaa agacagcctc
     1021 actctgcctt tccagttcag ctctgaaaaa cagcaagctc tgctgcatcc agtgccaggc
     1081 cagaccactg gccgcatctt ctacgagcca gatgcttttg atgatgtgga ccaagaagac
     1141 ccagatgacg acctagatat ttgacagaca tataggagag gaaggctgtg ggctcagaac
     1201 catcctgctg ttagcagact ctgcctttgt tgctttgtct ggagaggctg tgtcttgtga
     1261 gccaaggaga agcatcaagc tggggcagaa agggtggtga gagtgtagta tatgcccaga
     1321 gaataagaaa tcccctcctc ccgtgcccat ttctaataaa atatatgtgt gtgttactca
     1381 aaaaaaaaaa aaaaaaa
//
