LOCUS       XM_003751505            2829 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus elongator acetyltransferase complex
            subunit 3 (Elp3), transcript variant X1, mRNA.
ACCESSION   XM_003751505
VERSION     XM_003751505.5
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051350.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 2, 2024 this sequence was replaced by
            NM_001427748.1.
            
            On Jan 21, 2021 this sequence version replaced XM_003751505.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2829
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2829
                     /gene="Elp3"
                     /note="elongator acetyltransferase complex subunit 3;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 88 ESTs, 1 long SRA read, 2 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 243 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:100362548"
                     /db_xref="RGD:2324506"
     CDS             86..1786
                     /gene="Elp3"
                     /codon_start=1
                     /product="elongator complex protein 3 isoform X1"
                     /protein_id="XP_003751553.1"
                     /db_xref="GeneID:100362548"
                     /db_xref="RGD:2324506"
                     /translation="MKQKRKGAKNAGQGHKGGGGCSEITGDLSPAELMMLTIGDVIKQ
                     LVEAHEQGKDVDLNKLKTKTASKYGLSSQPRLVDIIAAVPPHYRKILIPKLKAKPIRT
                     ASGIAVVAVMCKPHRCPHISFTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRAR
                     YDPYLQTRHRIEQLKQLGHSVDKVEFIVMGGTFMALPEEYRDYFIRNLHDALSGHTSN
                     NIYEAIKYSERSLTKCIGITIETRPDYCMKRHLSDMLTYGCTRLEIGVQSVYEDVARD
                     TNRGHTVKAVCESFHLAKDSGFKVVAHMMPDLPNVGLERDIEQFIEFFENPAFRPDGL
                     KLYPTLVIRGTGLYELWKSGRYRSYSPSDLIELVARILALVPPWTRVYRVQRDIPMPL
                     VSSGVDHGNLRELAFARMKDLGIQCRDVRTREVGIQEIHHRVRPYQVELVRRDYVANG
                     GWETFLSYEDPDQDILIGLLRLRKCSEETFRFELGGGVSIVRELHVYGSVVPVSSRDP
                     TKFQHQGFGMLLMEEAERIALEEHGSGKIAVISGVGTRNYYRKMGYRLQGPYMVKMLK
                     "
ORIGIN      
        1 agtcgcggcg tgctttacgg ctgccaagtt tctccgccgt ctgaacctcg ataacgaggt
       61 gccaccctac tacgccagcg cagagatgaa gcaaaagagg aaaggtgcaa aaaacgcggg
      121 acaagggcac aagggaggcg gtggatgctc tgagatcaca ggggatctca gcccggctga
      181 gctgatgatg ctgactatag gagacgtgat caagcagctg gttgaagctc atgaacaagg
      241 caaggacgtc gatctaaata agctgaaaac caaaacagct tccaagtatg gcctgtcgtc
      301 ccagcctcgc ctggtggata tcattgctgc agtccctcct cactatcgaa agatcttgat
      361 tcccaagcta aaggcaaagc ccatcaggac tgccagtggg attgctgttg tggctgtgat
      421 gtgcaaaccc cacagatgtc cacacatcag ttttacaggg aatatatgtg tatactgccc
      481 tggaggacct gactcagatt ttgagtactc aacccagtct tacacgggct atgagccaac
      541 ttccatgcga gctatccgtg ctagatacga cccttatctg cagacaagac accggataga
      601 gcagctaaag cagcttggcc acagtgtgga taaggtggag ttcatcgtga tgggcggaac
      661 gttcatggcc cttccggagg aatacagaga ttattttatc cgaaatttac acgatgcttt
      721 atcaggacat acttcaaaca atatttacga ggcaatcaag tattccgaga gaagcctcac
      781 aaagtgcata gggattacca ttgagaccag acctgattac tgcatgaagc ggcacctaag
      841 tgacatgttg acttacggct gcacaaggct ggagattgga gtgcagagtg tctatgaaga
      901 tgtggccaga gataccaaca ggggccacac cgtgaaggca gtatgtgaat cattccacct
      961 ggccaaagat tctgggttca aagtggtggc gcacatgatg cctgacctgc cgaatgtggg
     1021 actagagaga gacattgagc agtttataga attttttgag aaccctgctt ttcgtcctga
     1081 tggtttgaag ctctacccta ccctggtgat ccgtggaact ggtctgtatg agctgtggaa
     1141 atcagggaga tacaggagct attctcccag tgatctgatt gagttggtgg ctcggatcct
     1201 agccctcgtg cccccttgga ctcgtgtgta ccgagtgcag agagacattc caatgcccct
     1261 cgtcagctca ggagtagacc atggcaacct tcgagagctg gcatttgcaa gaatgaaaga
     1321 tcttgggata cagtgccgag atgtgagaac cagggaggtt ggaatccaag aaattcatca
     1381 cagagtgcgg ccgtaccagg ttgagttggt acggagagat tatgttgcca atggcggctg
     1441 ggagaccttc ctttcctacg aagatcccga tcaggacatt ctaattggcc tcctaaggct
     1501 acggaaatgc tctgaggaaa ccttccgatt tgaactgggt ggaggcgttt ccatagtccg
     1561 agagctacat gtgtatggaa gtgtggtccc tgtgagcagc cgggacccca ctaaatttca
     1621 gcatcagggg ttcggcatgc tgctgatgga agaagcagaa agaatcgctc tggaagagca
     1681 cgggtctggg aaaatcgcag ttatatcagg agtcggcaca agaaattact accgaaagat
     1741 gggctacaga ttgcaaggcc cgtacatggt aaagatgcta aaataagacc actacagtct
     1801 accttcatgc agcgtcctct gactaaattc aggtggggtc tcctgaatac gcagcggagg
     1861 ctgagaggta aatggtctgc acgcccctgg acagtactct gccctcccct gcggctgcca
     1921 ctcacaactc tgacccctgt gacagaggcc aaattcaccc tctttatgtg tccgtggagc
     1981 cacttctggt tttgaggctt aaaggatttt aaattctgca tgaaggctgc aggtgaccca
     2041 tttgggctca gatgctatgt gaccagagca aatcaactcc ttaggccatc atcacttgtg
     2101 attgtcatct gaggggcagg ctcgggagaa gattagttat atatccacag acaaaagccg
     2161 gactgtagcg cagacaagct gtcagacgtg actctctgcc ctttaaccac gtgcacattc
     2221 acccagagac ggagaagatg agctttgcag tgggagtctc cgtggccctg ccatgtcttg
     2281 aaatggccgt gtttggggaa ggaagagcta tggtagtggg tagtgttaag cttgatgccg
     2341 gctgtctcac ctgccctgag ccaggcctct cagagccttt cctttgtctc atatctgtga
     2401 aagtctgtgc gtccataccc ctgacacctg cagggcagtg tgcactatct catgtgtgct
     2461 gggctagctt gtgccagcca gttcatctgt cctgcgcatc acggtccagg gtgcatggct
     2521 agagcctcat ggccctggtc aggactagtc catcctcaga cacgtctctg catgttaatt
     2581 ctgtgaggtt ggtagtggtg atggtgctgc atgaagaagg taggagttag gctagtgtgt
     2641 gaaagtgggc ctgtctgagc atggagggac agtgggcttt tcagaggctt cttcaccatc
     2701 cagcttgtcc actgaggaga ccaggctctg agacagcctg cctcgcctgg gcatctgtca
     2761 tttccagcag tgtttagtga aagctgttct ctaaaaggtc tgaaaaataa agtgtttggc
     2821 acaaaagaa
//
