LOCUS       XM_039082189             834 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus elongation factor 1 (Elof1),
            transcript variant X6, mRNA.
ACCESSION   XM_039082189
VERSION     XM_039082189.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..834
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..834
                     /gene="Elof1"
                     /gene_synonym="RGD1309855"
                     /note="elongation factor 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 38
                     ESTs, 20 long SRA reads, 6 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 22 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:691193"
                     /db_xref="RGD:1587399"
     CDS             43..294
                     /gene="Elof1"
                     /gene_synonym="RGD1309855"
                     /codon_start=1
                     /product="transcription elongation factor 1 homolog
                     isoform X1"
                     /protein_id="XP_038938117.1"
                     /db_xref="GeneID:691193"
                     /db_xref="RGD:1587399"
                     /translation="MGRRKSKRKPPPKKKMTGTLETQFTCPFCNHEKSCDVKMDRARN
                     TGVISCTVCLEEFQTPITYLSEPVDVYSDWIDACEAANQ"
ORIGIN      
        1 tggggtagtt ggaccacaga cggtttcatc ccctctgcag ttatgggacg aaggaagtct
       61 aaacggaagc cgccccccaa gaagaagatg acaggcacct tggagactca gtttacctgc
      121 cctttctgca accacgagaa gtcttgtgat gtgaaaatgg accgtgctcg aaacactgga
      181 gtcatctcct gtaccgtgtg cctagaggaa ttccagacac ccatcacata cctgtcagaa
      241 cccgtggatg tgtacagcga ctggatagac gcctgcgagg cagccaatca gtagcgatgt
      301 cacggacctg ctcccccgaa gcccccactc tggctactga tccagagaca ttcctgggct
      361 ccagggtgta ggtccagcgc cgggccagcc ctccctctgt gtgtgtggag tggtgtgaat
      421 gagtatctgc acacgtggct gcagatgtga ctgcaggggt ggagaagagt gattgctgtg
      481 tctcaccatg cagtccagga ttcctcacag aaccctatgc ctcaagtgac tgaaagcctt
      541 cgagtgctcc cttctccagc ccactgtctt ctccggtgac ggtccctgac atcccaagcc
      601 gggaatagct gtaggacctc caatcacctc agccacctca ccagcacctt gcccttgagg
      661 aactggactt tctctccttc ccagcctcct agtgcttgtg gtctactcag gtcccttgac
      721 tgggatttgc tggggcacac catttttctt gtttgccttt gtagaaaagg tgtaggggct
      781 tatttggaat acagctgtcc ctcatgagcc tgtcaataaa gcagccagtg tgta
//
