LOCUS       XM_039097605            2350 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus engulfment and cell motility 3
            (Elmo3), transcript variant X1, mRNA.
ACCESSION   XM_039097605
VERSION     XM_039097605.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051354.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039097605.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2350
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2350
                     /gene="Elmo3"
                     /note="engulfment and cell motility 3; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 16 ESTs, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 68 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:291962"
                     /db_xref="RGD:1304734"
     CDS             65..2242
                     /gene="Elmo3"
                     /codon_start=1
                     /product="engulfment and cell motility protein 3 isoform
                     X1"
                     /protein_id="XP_038953533.1"
                     /db_xref="GeneID:291962"
                     /db_xref="RGD:1304734"
                     /translation="MAPPRNVVKIAVQMSDAIPQLIQLDQAKPLATVLKEVCDTFLLY
                     RWSLTHPEHYALQFADGHRKYITENNRSEIKNGSILCLSTAPDLKAQQLLSRLQNASR
                     EGCCEVLRNLVPLASDMTFAQEVISRDGLQKLSTIIENGDDLGEMLALGLRAFLELME
                     HGVVSWETLSISFVRKVVSYVNMNLMDASVQPLALRLLESVTLSSPTLGQLVKSEVPL
                     DRLLVHLQVMNQQLQTKAMALLTALLQGASPAERKDMLDCLWKKNLRQFIYKNIIHSA
                     APMGDEMAHHLYVLQALTLGLLEPRMRTPLDPYSQEQREQLQALRQAAFEPDGESLGT
                     GLSADRRRSLCVREFRKLGFSNSSPAQDLERVPPGLLALDNMLYFSRHAPSAYSRFVL
                     ENSSREDKHECPFARSSIQLTVLLCELLHVGEPCSETAQDFSPMFFSQDHSFHELFCV
                     AIQLLNKTWKEMRATQEDFDKVMQVVREQLARTLALKPTSLELFRTKVNALTYGEVLR
                     LRQTERLHQEGTLAPPILELREKLKPELMGLIRQQRLLRLCEGMLFRKISSRRRQDKL
                     WFCCLSPNHKVLQYGDVEEGANPPTLESLTEQLPVADIRALLMGKDCPHVREKGSGKQ
                     NKDLYELAFSISYDHGEEEAYLNFIAPSKRDFYLWTDGLSALLGSTMGSEQTRLDLEQ
                     LLTMETKLRLLELENVPIPEHPPPVPPPPTNFNFCYDYSMTEP"
ORIGIN      
        1 tcttcctaga ccctagatca gttgcaccca cggcgggagg tggcacggcc acggcggctg
       61 gactatggcg cccccgcgga atgtggtgaa gattgccgtt cagatgtctg acgccatccc
      121 acagcttatc cagctagacc aggcaaagcc cctggccact gttctgaagg aggtgtgtga
      181 cactttcctg ctctacaggt ggagcctgac tcatccggag cactatgccc ttcagtttgc
      241 tgatgggcac aggaaataca tcacagagaa taaccgctcg gagatcaaga atggaagcat
      301 cctgtgcctc agtactgccc cagatctgaa ggcccagcag ctactgagta ggctgcagaa
      361 tgcgagtcgt gaagggtgct gtgaagtcct gagaaacctg gtcccgctgg cctcagacat
      421 gacctttgcc caggaggtca tcagtcgtga tgggcttcag aaattaagca ccatcattga
      481 aaatggggat gacctagggg agatgctggc ccttgggcta agggctttcc tggagctcat
      541 ggaacacgga gtagtgtctt gggagacact cagcatttcc tttgtcagga aggtggtatc
      601 ttatgtgaac atgaacttga tggatgcctc tgtgcagccc ctggccctca ggctactgga
      661 gagtgtgacc ctgagcagcc ctaccctggg ccagctggtg aagagtgagg tgccactaga
      721 caggctgcta gtgcacctgc aggtaatgaa ccagcagctg caaaccaagg ctatggcact
      781 gctgacagcc ctgctgcagg gggccagccc tgctgagcgt aaggacatgc ttgactgcct
      841 atggaagaag aatcttcgcc agttcatcta caagaacatc atccacagtg cagcacccat
      901 gggtgacgag atggctcatc acttgtatgt gctgcaggct ctaacactgg ggctgctgga
      961 gccacgtatg cggacacccc ttgatcccta cagccaggag cagcgggagc agctacaggc
     1021 cctgcgccag gcagcctttg aaccagacgg ggagtccttg ggcacaggcc tgagtgctga
     1081 ccgccgccgg tctctctgtg tccgagagtt ccgcaagcta ggcttctcca atagcagccc
     1141 ggcccaggac ctggaacgtg tgccccctgg cctactggcc ctggacaaca tgctctactt
     1201 ctccagacat gcgcctagtg catacagtcg gttcgtgttg gagaacagta gccgagagga
     1261 caagcatgaa tgcccctttg cccggagcag cattcagctg acagtgttgc tgtgtgagct
     1321 gctccatgtt ggggagcctt gctccgagac cgcccaggac ttctcaccca tgttcttcag
     1381 ccaagaccac agtttccatg agctcttttg tgtggctatc cagctgctga ataagacctg
     1441 gaaggaaatg cgggcaacac aggaggattt tgacaaggta atgcaggtgg ttcgggaaca
     1501 gctagcccgt accctggctc tgaagcccac ctctctggag ctctttcgaa ccaaagtaaa
     1561 tgccctcacc tatggggaag tgttgaggct gcgacagaca gagcggctgc accaagaggg
     1621 cacattggcc cctcctatct tggagctccg agagaagctg aagccagagc tcatgggttt
     1681 aatccgccag cagcgtttgc tccgactctg tgagggaatg ctcttccgca agatcagcag
     1741 ccggagacgc caggacaagc tatggttttg ctgtttatcc cccaaccata aagtactgca
     1801 gtatggcgat gtggaggagg gcgccaaccc tcccacctta gaaagcctaa ctgaacaact
     1861 ccctgtggct gacatcaggg cactcctaat gggcaaggac tgcccccatg tccgggagaa
     1921 gggctctggg aagcagaaca aggacctcta tgagttggcc ttctccatca gctatgacca
     1981 tggggaggaa gaagcatacc tcaacttcat tgccccctcc aaacgggatt tctacctgtg
     2041 gacagatgga ctgagtgccc tgctgggcag tactatgggg agtgaacaga ctcggctaga
     2101 cctggagcag ctgctcacta tggagaccaa gttgcggttg ttggaactgg agaatgtgcc
     2161 cattcctgag catcctcccc cagtaccccc acctcctacc aactttaact tctgctatga
     2221 ctacagcatg actgagcctt gactgaagtt aggctacagt tgatactgct gtagcagcca
     2281 caaaaagggt tgagaatcac agacagcctg accagagcct gtagcagaaa taaagttacc
     2341 tttgcttata
//
