LOCUS       XM_006232327            5590 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus E74 like ETS transcription factor 2
            (Elf2), transcript variant X4, mRNA.
ACCESSION   XM_006232327
VERSION     XM_006232327.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006232327.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006232327.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5590
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5590
                     /gene="Elf2"
                     /note="E74 like ETS transcription factor 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 28 ESTs, 4 long SRA reads, 3 Proteins, and 99%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 229 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:361944"
                     /db_xref="RGD:1310585"
     CDS             223..1818
                     /gene="Elf2"
                     /codon_start=1
                     /product="ETS-related transcription factor Elf-2 isoform
                     X3"
                     /protein_id="XP_006232389.1"
                     /db_xref="GeneID:361944"
                     /db_xref="RGD:1310585"
                     /translation="MATSLHEGPTNQLDLLIRAVEASVHSSNAHCTDKTIEAAEALLH
                     MESPTCLRDSRSPVEVFVPPCISTPEFIHAAMRPDVITETVVEVSTEESEPMDASPIP
                     TSPDSHEPMKKKKVGRKPKTQQSPVSNGSPELGVKKKAREGKGNTTYLWEFLLDLLQD
                     KNTCPRYIKWTQREKGIFKLVDSKAVSKLWGKHKNKPDMNYETMGRALRYYYQRGILA
                     KVEGQRLVYQFKDMPKNIVVIDDDKSETCPEDLAAAADDKSLERVSLSAESLLKAATA
                     VRGGKNSSPMNCSRAEKGVTRVVNITSPAHDASSRCPTTTAPVSAAAAPRTVRVAMQV
                     PVVMTSLGQKISTVAVQSVNAGTPLITSTSPATASSPKVVIQTVPTVMPASAENGDRI
                     TMQPAKIITIPATQLAQCQLQTKSNLTGSGSISLVGTPLAVRALTPVSIAHGTPVMRL
                     SVPAQQASGQTPPRVISAVIKGPEVKSEAKKQEHDVKTLQLVEEKGADGNKTVTHVVV
                     VSAPSAIALPVTMKTEGLVTCEK"
ORIGIN      
        1 cgttaggtgg tggggctgct cagcccggcg gcgggaggcg ggccggccgc cgcttcctgt
       61 cggaggacgc gcaaggatcc gggcgtcgga gtgtgtgcga gtgcgtgagt gtgtgccgcc
      121 cgcacggcgt gtgtctccgg ccgcgggttc cgccttctcc cctgtcgccg ctgctcaggg
      181 tgtaagtcaa tgtgaagcag cagttccagc cccgggataa acatggcgac gtctctgcat
      241 gagggaccca cgaaccagct ggatctgctc atccgggccg tggaagcatc agttcacagc
      301 agtaatgcac actgtacgga taagaccatt gaagctgctg aagccctgct tcatatggag
      361 tctcctacct gcttgaggga ttcaagaagt cccgtggaag tgtttgtccc tccttgtata
      421 tcaactccag agtttatcca tgctgcgatg aggccagatg tcattacgga gactgtagtg
      481 gaggtgtcaa cagaggagtc tgaaccaatg gatgcctcgc ctatccctac ttcaccagac
      541 agccacgaac caatgaaaaa gaagaaagtt ggccgtaaac caaagaccca gcagtcacca
      601 gtttccaatg ggtctcctga gttaggagtc aagaagaaag ccagagaagg aaaaggaaac
      661 acaacctatc tgtgggagtt tcttttagat ctgcttcaag ataaaaatac ttgtcccagg
      721 tatattaaat ggactcagag agaaaagggc atattcaagc tggtggactc aaaggctgtc
      781 tcgaagctct ggggaaagca taagaacaaa ccagacatga actatgaaac tatggggcga
      841 gctctgagat actactacca aaggggaatt cttgcaaagg ttgaaggaca gaggctcgta
      901 tatcagttca aggacatgcc caaaaacata gtggtcattg atgatgacaa aagtgagact
      961 tgcccggaag acttggcagc agctgctgat gacaagtctt tagaacgagt gtcactatct
     1021 gcagaaagtc tcctgaaggc agcgactgcc gtccgaggtg ggaaaaactc atctcctatg
     1081 aactgctcca gagcagagaa gggtgtgact agagttgtga acatcacttc ccctgctcac
     1141 gatgcttcat ccaggtgtcc taccaccaca gcacccgtgt cagcagcagc agctccaagg
     1201 acagttcgtg tggcaatgca agtccctgtg gtaatgacat cactgggtca aaagatttcc
     1261 actgtggcag ttcagtcagt caatgcaggc acaccattaa taaccagcac cagtccagct
     1321 acagccagct ctccaaaagt agtcatccag acggtcccga ctgtgatgcc agcctccgct
     1381 gagaatggag acagaatcac catgcagcct gccaagatta tcaccatccc cgctacccag
     1441 cttgcacagt gtcagctgca gacaaagtca aatctgactg ggtcaggaag cattagcctt
     1501 gttggaaccc ccctggctgt gagagcgctc acccctgttt caatagccca cggtacacct
     1561 gtgatgagac tatctgtgcc cgctcagcag gcttctggcc agactcctcc tcgagttatc
     1621 agtgcggtca taaaagggcc agaggttaaa tcagaagcca aaaagcagga acacgatgtg
     1681 aaaactttgc agctggtaga agaaaagggg gcagacggaa ataagacagt aacccatgta
     1741 gtggttgtca gtgcgccctc tgctatcgcc cttcctgtga ctatgaaaac cgaagggctg
     1801 gtgacgtgtg agaaataagc aagctcccag ggacttcaga ctgttagtgt tgtactgaca
     1861 gacatttgca agggaagtca tcgggaaaag gcagaggagg actttcaaac aactgtgcat
     1921 agaagaaagc aatcagactt actggaaata aattacctat cccatgtttc agtgggaagt
     1981 gaactacaca ttgagatgct gacagaaaac tgcctcttaa agtaagaaca actgaaccct
     2041 caataagaaa aaagactgaa agggaccaag cagctcacta caatctcccg ttacactaag
     2101 agttggaaca ctaacacctg taagaggtta catagttttc agaggggcgg ggttgggatg
     2161 ggtgatgtca ttgttacaaa tagcattttt tgatgcattt tatatgcata ccagcaatta
     2221 gcactgggct ctcgcagtgc tcacttaact ggtgctatgt gaagactctg ctaatacagg
     2281 tattctagaa tgtgaactga gtgatccaaa agcttcacag agagagagga tagcaagatc
     2341 tagtgcgctt ttgtttgttt gttttgtttt attttttgat tttgaatata tatatatata
     2401 tatcatagct taagctgttt taaaacaaag gccttagact aattttcagt ttcctttctt
     2461 gaaataagct aatggcttgt gtaaagcttt tttattaaaa gaaaaatttt aaaaatcttg
     2521 tacctagcac agtattgtta tagagtttcc atgtaacatt ttctatggta gtttaagtct
     2581 gtcggtttct tacttgtgaa gagattaaca gttggctctg gcccttgact gtaccatccc
     2641 tgcgccgctc aagtcaccct gccgtccgtc cgtccgtccg tccgtccttc cgtccgcaga
     2701 cacaccggta tcagttcttc tgtcatttga cattcaggct cgcatgaact cgccaggtag
     2761 ctctgatacc tggtgtttgt ttcctttctc attctttttc cttttctccc ttttttctct
     2821 ttttcttttt tagttgacat ttaagaggga aagtaccagt gttcagattt gaactataat
     2881 agtttgtata ttcaacattt gaagtatatt ctattttgtt gtactcttgt ttcaaagtgt
     2941 attcaagtag gttttgaaat atagaagtga aatttatctt gtggttttgg tctctggtga
     3001 tatttttcac aatactcaaa agccagtcca ggatgtcgtt ttaattatgc aacagaaatc
     3061 tggtgttttc ttaatgacta ccaaagaaat gctgttccgg tttaggtagg ctttgtccca
     3121 ttatagagat atttggcaac tctctgcact ttctttgtaa ctataatcac ggacttaaca
     3181 gcgttctagt tggccacacg taatggactt atacacgtga aacactttta gcactagcag
     3241 taggcggtgt gcctggcatg tgcaggctcc tgggtctgtc tgtcctagca cctcacatgt
     3301 actgagtcac ttccattcag ttggaccgtt tgtttccccg atagaccttt tatgggcggg
     3361 aagtgatggc ctggcctata caggtgcagg ctaagtacca gagaattacg agtttcttag
     3421 tgtcacacaa ttataattag atcctcctct tcatcttagt attctcttcc acaaagaaaa
     3481 agttgccttt ttagaaattt agatgaactg ctgaacattt ttcggccttt gtatatttaa
     3541 tgctatttat agcagcaaag atttttataa aagtaccctt tctagccttt ttaaaaaaac
     3601 taaactgatt taaaaaatta tatgtatgga tgttttgttg gcatggctgt gtacacttgt
     3661 tcctgaggag gccagagtgg gtgtcagatc cactgcagct ccagttacca agatggttgt
     3721 gagctgcact ttgggttttg aacctggtcc tctagaagtg cagccaacac tgaactgcta
     3781 aaccatctct ccaggtcaca ttctgaaact tttaaaaacc tagggtgatt tgattcttac
     3841 ccctttgaga gttaccctca aaattaacct cttaaagtat accttaagtg cttcagctgt
     3901 caaaaccaac accgtgcagt tatctttttg gtcttgtctc ttaaactcct ttttcagaag
     3961 ttcaggacct tggacctgag ccacagaatt tgtttacctt ggctaacaag tctcagcagc
     4021 tcacggtact aaagtttaag cacatacttc cgcattcagt tagttgattt gaactctctt
     4081 ctactaaaag cagcagaaaa cgtctcagat aaatgtctag atttgcaaat gtaactgcag
     4141 cttttggact tggccactct gaatgattag ccagtatact gtgtttacac tttgtgtcca
     4201 aggtttttgg agaagagcta caaacccatg gcttgatgca ttttccagcc tctccaggcc
     4261 tttgcactgt gatcaacagt ttgtgtttac tccttaggtg actttccagt agcagttcca
     4321 gccttctcac cagatgaccg agtacatctg cagagacccc agaagatctc acgtcagcaa
     4381 ccgtccttgt gtctctcagg aaggtgcctc ttattcagaa gcatctcttt ccccggccca
     4441 atagttaaca gtcggtcatt cagtattttc taccagacca ctttttttct caatgggaag
     4501 ttagtctgca gtgctcattg aaattcacca atagcctagt ttccaagtca aacacaattc
     4561 tgaaaatgct tttaaagtgt gagctgggga gatgactcag cagttactga ggttccagca
     4621 accacatggt ggctcacacc catctgtaat gggatccgat gccctcttct ggtgtgtctg
     4681 aagacagtga cagtgtactc atacatcaat aataaatctt taaaaagtta gtgtacatgc
     4741 atggagatca ggacaaggtt ctgaagtcag ttactcgtga gtcatctcag acgccccaca
     4801 ctacatcttc agatataatt tccttttatg tgcttacata tgtgattgtg tgccacatgt
     4861 atgaggtgcc catggaggcc agaatgagtt ggagtgcgtg gaactggagt taccatgaga
     4921 gctgccatgt ggttgctggg aacctgagtc ctctgcaaga gcagcaatgc taacggtccc
     4981 tccactcagg cactctcagc ctcacctccc ccatcaaatc ttgtgcctta cactgtttcc
     5041 caaagtcaat ttggtttttc catggcatgc ctcgggctta ttatcggcct aagtggctct
     5101 cctcaggcct ggtttgattt gcggcaaagg ttttgtctgt agggtttggc gtgtggaagg
     5161 aatgaaatga gttggtatgt gctgcacaag cagacactac tgtttactaa agtgatcacg
     5221 ttgtgagagc tgttcaggca gctgcccagg ttttctccta ccaaatcttg gtccagatta
     5281 gattttgact aaatcttact agcttatttt atctaattgc cacatcgcag ctcttcctga
     5341 gtgctggatt aaactgttcc gtttagtatt aacatccctt aacttctgcc caggatctgt
     5401 aagcgatctc aaagccctca ctccccaagc cctgttgatg gtatctcacg catgccttcc
     5461 ttccctccag taaggtctgg ctatgtagcc caggttatag gaaaagcatc atccttctgc
     5521 ttcagactac tgagatatca ggaagctagt gtgccaaaaa agccaaaata aataaaagtg
     5581 gatttcatta
//
