LOCUS       XM_006232325            5932 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus E74 like ETS transcription factor 2
            (Elf2), transcript variant X2, mRNA.
ACCESSION   XM_006232325
VERSION     XM_006232325.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006232325.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006232325.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5932
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5932
                     /gene="Elf2"
                     /note="E74 like ETS transcription factor 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 28 ESTs, 3 long SRA reads, 5 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 66 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:361944"
                     /db_xref="RGD:1310585"
     CDS             385..2160
                     /gene="Elf2"
                     /codon_start=1
                     /product="ETS-related transcription factor Elf-2 isoform
                     X1"
                     /protein_id="XP_006232387.1"
                     /db_xref="GeneID:361944"
                     /db_xref="RGD:1310585"
                     /translation="MASAVVGGGGSVLELSSNGVENQEGGDTVPEFPAVIVEPVPSAR
                     LEQGYAAQVLVYDDETYMMQDVAEEQEVETENSETVEASVHSSNAHCTDKTIEAAEAL
                     LHMESPTCLRDSRSPVEVFVPPCISTPEFIHAAMRPDVITETVVEVSTEESEPMDASP
                     IPTSPDSHEPMKKKKVGRKPKTQQSPVSNGSPELGVKKKAREGKGNTTYLWEFLLDLL
                     QDKNTCPRYIKWTQREKGIFKLVDSKAVSKLWGKHKNKPDMNYETMGRALRYYYQRGI
                     LAKVEGQRLVYQFKDMPKNIVVIDDDKSETCPEDLAAAADDKSLERVSLSAESLLKAA
                     TAVRGGKNSSPMNCSRAEKGVTRVVNITSPAHDASSRCPTTTAPVSAAAAPRTVRVAM
                     QVPVVMTSLGQKISTVAVQSVNAGTPLITSTSPATASSPKVVIQTVPTVMPASAENGD
                     RITMQPAKIITIPATQLAQCQLQTKSNLTGSGSISLVGTPLAVRALTPVSIAHGTPVM
                     RLSVPAQQASGQTPPRVISAVIKGPEVKSEAKKQEHDVKTLQLVEEKGADGNKTVTHV
                     VVVSAPSAIALPVTMKTEGLVTCEK"
ORIGIN      
        1 ggtcgtggcg ccgagggacc gcggcgcgcg ctgtttacct cgcggcgcca gtcatcgcgc
       61 ggcggccagg ctgccgggga agcgcttccc gggcggcagt ttccgtcgcc gtcgggcctg
      121 ctcgccgccg cccgggcggg cacgacagta gctccagaga gctgctggtt tagagttcag
      181 ctcttgggag tgtggaaacg gtgaaggatg cttagactac ttaaccgtca aactaccctc
      241 tggttaatca tctttagaag actggacttc tggatgtcta ctccatcact attgaattag
      301 aacatgaaac cgataaccct ggcaatcatc tgagccgtaa ttacattgat tcgcagcgtt
      361 cgaaacttgc tcagggaaga cgcgatggca tcagcagtgg ttggcggcgg aggctctgtt
      421 ctggagcttt ccagcaatgg agtagaaaat caagagggag gggacacggt ccctgaattt
      481 ccggcagtga ttgtggagcc cgtccccagt gcgaggttag agcagggcta cgctgcccag
      541 gtgctggtgt atgacgatga gacttacatg atgcaggatg tggcggaaga acaagaagtt
      601 gagacggaga attcagaaac agtggaagca tcagttcaca gcagtaatgc acactgtacg
      661 gataagacca ttgaagctgc tgaagccctg cttcatatgg agtctcctac ctgcttgagg
      721 gattcaagaa gtcccgtgga agtgtttgtc cctccttgta tatcaactcc agagtttatc
      781 catgctgcga tgaggccaga tgtcattacg gagactgtag tggaggtgtc aacagaggag
      841 tctgaaccaa tggatgcctc gcctatccct acttcaccag acagccacga accaatgaaa
      901 aagaagaaag ttggccgtaa accaaagacc cagcagtcac cagtttccaa tgggtctcct
      961 gagttaggag tcaagaagaa agccagagaa ggaaaaggaa acacaaccta tctgtgggag
     1021 tttcttttag atctgcttca agataaaaat acttgtccca ggtatattaa atggactcag
     1081 agagaaaagg gcatattcaa gctggtggac tcaaaggctg tctcgaagct ctggggaaag
     1141 cataagaaca aaccagacat gaactatgaa actatggggc gagctctgag atactactac
     1201 caaaggggaa ttcttgcaaa ggttgaagga cagaggctcg tatatcagtt caaggacatg
     1261 cccaaaaaca tagtggtcat tgatgatgac aaaagtgaga cttgcccgga agacttggca
     1321 gcagctgctg atgacaagtc tttagaacga gtgtcactat ctgcagaaag tctcctgaag
     1381 gcagcgactg ccgtccgagg tgggaaaaac tcatctccta tgaactgctc cagagcagag
     1441 aagggtgtga ctagagttgt gaacatcact tcccctgctc acgatgcttc atccaggtgt
     1501 cctaccacca cagcacccgt gtcagcagca gcagctccaa ggacagttcg tgtggcaatg
     1561 caagtccctg tggtaatgac atcactgggt caaaagattt ccactgtggc agttcagtca
     1621 gtcaatgcag gcacaccatt aataaccagc accagtccag ctacagccag ctctccaaaa
     1681 gtagtcatcc agacggtccc gactgtgatg ccagcctccg ctgagaatgg agacagaatc
     1741 accatgcagc ctgccaagat tatcaccatc cccgctaccc agcttgcaca gtgtcagctg
     1801 cagacaaagt caaatctgac tgggtcagga agcattagcc ttgttggaac ccccctggct
     1861 gtgagagcgc tcacccctgt ttcaatagcc cacggtacac ctgtgatgag actatctgtg
     1921 cccgctcagc aggcttctgg ccagactcct cctcgagtta tcagtgcggt cataaaaggg
     1981 ccagaggtta aatcagaagc caaaaagcag gaacacgatg tgaaaacttt gcagctggta
     2041 gaagaaaagg gggcagacgg aaataagaca gtaacccatg tagtggttgt cagtgcgccc
     2101 tctgctatcg cccttcctgt gactatgaaa accgaagggc tggtgacgtg tgagaaataa
     2161 gcaagctccc agggacttca gactgttagt gttgtactga cagacatttg caagggaagt
     2221 catcgggaaa aggcagagga ggactttcaa acaactgtgc atagaagaaa gcaatcagac
     2281 ttactggaaa taaattacct atcccatgtt tcagtgggaa gtgaactaca cattgagatg
     2341 ctgacagaaa actgcctctt aaagtaagaa caactgaacc ctcaataaga aaaaagactg
     2401 aaagggacca agcagctcac tacaatctcc cgttacacta agagttggaa cactaacacc
     2461 tgtaagaggt tacatagttt tcagaggggc ggggttggga tgggtgatgt cattgttaca
     2521 aatagcattt tttgatgcat tttatatgca taccagcaat tagcactggg ctctcgcagt
     2581 gctcacttaa ctggtgctat gtgaagactc tgctaataca ggtattctag aatgtgaact
     2641 gagtgatcca aaagcttcac agagagagag gatagcaaga tctagtgcgc ttttgtttgt
     2701 ttgttttgtt ttattttttg attttgaata tatatatata tatatcatag cttaagctgt
     2761 tttaaaacaa aggccttaga ctaattttca gtttcctttc ttgaaataag ctaatggctt
     2821 gtgtaaagct tttttattaa aagaaaaatt ttaaaaatct tgtacctagc acagtattgt
     2881 tatagagttt ccatgtaaca ttttctatgg tagtttaagt ctgtcggttt cttacttgtg
     2941 aagagattaa cagttggctc tggcccttga ctgtaccatc cctgcgccgc tcaagtcacc
     3001 ctgccgtccg tccgtccgtc cgtccgtcct tccgtccgca gacacaccgg tatcagttct
     3061 tctgtcattt gacattcagg ctcgcatgaa ctcgccaggt agctctgata cctggtgttt
     3121 gtttcctttc tcattctttt tccttttctc ccttttttct ctttttcttt tttagttgac
     3181 atttaagagg gaaagtacca gtgttcagat ttgaactata atagtttgta tattcaacat
     3241 ttgaagtata ttctattttg ttgtactctt gtttcaaagt gtattcaagt aggttttgaa
     3301 atatagaagt gaaatttatc ttgtggtttt ggtctctggt gatatttttc acaatactca
     3361 aaagccagtc caggatgtcg ttttaattat gcaacagaaa tctggtgttt tcttaatgac
     3421 taccaaagaa atgctgttcc ggtttaggta ggctttgtcc cattatagag atatttggca
     3481 actctctgca ctttctttgt aactataatc acggacttaa cagcgttcta gttggccaca
     3541 cgtaatggac ttatacacgt gaaacacttt tagcactagc agtaggcggt gtgcctggca
     3601 tgtgcaggct cctgggtctg tctgtcctag cacctcacat gtactgagtc acttccattc
     3661 agttggaccg tttgtttccc cgatagacct tttatgggcg ggaagtgatg gcctggccta
     3721 tacaggtgca ggctaagtac cagagaatta cgagtttctt agtgtcacac aattataatt
     3781 agatcctcct cttcatctta gtattctctt ccacaaagaa aaagttgcct ttttagaaat
     3841 ttagatgaac tgctgaacat ttttcggcct ttgtatattt aatgctattt atagcagcaa
     3901 agatttttat aaaagtaccc tttctagcct ttttaaaaaa actaaactga tttaaaaaat
     3961 tatatgtatg gatgttttgt tggcatggct gtgtacactt gttcctgagg aggccagagt
     4021 gggtgtcaga tccactgcag ctccagttac caagatggtt gtgagctgca ctttgggttt
     4081 tgaacctggt cctctagaag tgcagccaac actgaactgc taaaccatct ctccaggtca
     4141 cattctgaaa cttttaaaaa cctagggtga tttgattctt acccctttga gagttaccct
     4201 caaaattaac ctcttaaagt ataccttaag tgcttcagct gtcaaaacca acaccgtgca
     4261 gttatctttt tggtcttgtc tcttaaactc ctttttcaga agttcaggac cttggacctg
     4321 agccacagaa tttgtttacc ttggctaaca agtctcagca gctcacggta ctaaagttta
     4381 agcacatact tccgcattca gttagttgat ttgaactctc ttctactaaa agcagcagaa
     4441 aacgtctcag ataaatgtct agatttgcaa atgtaactgc agcttttgga cttggccact
     4501 ctgaatgatt agccagtata ctgtgtttac actttgtgtc caaggttttt ggagaagagc
     4561 tacaaaccca tggcttgatg cattttccag cctctccagg cctttgcact gtgatcaaca
     4621 gtttgtgttt actccttagg tgactttcca gtagcagttc cagccttctc accagatgac
     4681 cgagtacatc tgcagagacc ccagaagatc tcacgtcagc aaccgtcctt gtgtctctca
     4741 ggaaggtgcc tcttattcag aagcatctct ttccccggcc caatagttaa cagtcggtca
     4801 ttcagtattt tctaccagac cacttttttt ctcaatggga agttagtctg cagtgctcat
     4861 tgaaattcac caatagccta gtttccaagt caaacacaat tctgaaaatg cttttaaagt
     4921 gtgagctggg gagatgactc agcagttact gaggttccag caaccacatg gtggctcaca
     4981 cccatctgta atgggatccg atgccctctt ctggtgtgtc tgaagacagt gacagtgtac
     5041 tcatacatca ataataaatc tttaaaaagt tagtgtacat gcatggagat caggacaagg
     5101 ttctgaagtc agttactcgt gagtcatctc agacgcccca cactacatct tcagatataa
     5161 tttcctttta tgtgcttaca tatgtgattg tgtgccacat gtatgaggtg cccatggagg
     5221 ccagaatgag ttggagtgcg tggaactgga gttaccatga gagctgccat gtggttgctg
     5281 ggaacctgag tcctctgcaa gagcagcaat gctaacggtc cctccactca ggcactctca
     5341 gcctcacctc ccccatcaaa tcttgtgcct tacactgttt cccaaagtca atttggtttt
     5401 tccatggcat gcctcgggct tattatcggc ctaagtggct ctcctcaggc ctggtttgat
     5461 ttgcggcaaa ggttttgtct gtagggtttg gcgtgtggaa ggaatgaaat gagttggtat
     5521 gtgctgcaca agcagacact actgtttact aaagtgatca cgttgtgaga gctgttcagg
     5581 cagctgccca ggttttctcc taccaaatct tggtccagat tagattttga ctaaatctta
     5641 ctagcttatt ttatctaatt gccacatcgc agctcttcct gagtgctgga ttaaactgtt
     5701 ccgtttagta ttaacatccc ttaacttctg cccaggatct gtaagcgatc tcaaagccct
     5761 cactccccaa gccctgttga tggtatctca cgcatgcctt ccttccctcc agtaaggtct
     5821 ggctatgtag cccaggttat aggaaaagca tcatccttct gcttcagact actgagatat
     5881 caggaagcta gtgtgccaaa aaagccaaaa taaataaaag tggatttcat ta
//
