LOCUS       NM_001109345            5912 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus endosome-lysosome associated apoptosis and
            autophagy regulator family member 2 (Elapor2), mRNA.
ACCESSION   NM_001109345 XM_001062105 XM_001062169 XM_578226
VERSION     NM_001109345.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 5912)
  AUTHORS   Araki T, Kusakabe M and Nishida E.
  TITLE     A transmembrane protein EIG121L is required for epidermal
            differentiation during early embryonic development
  JOURNAL   J Biol Chem 286 (8), 6760-6768 (2011)
   PUBMED   21177533
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474013.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_578226.2, XM_001062105.1, XM_001062169.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMD00132261, SAMD00132262
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..5912
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q12"
     gene            1..5912
                     /gene="Elapor2"
                     /gene_synonym="RGD1563349"
                     /note="endosome-lysosome associated apoptosis and
                     autophagy regulator family member 2"
                     /db_xref="GeneID:502727"
                     /db_xref="RGD:1563349"
     exon            1..351
                     /gene="Elapor2"
                     /gene_synonym="RGD1563349"
                     /inference="alignment:Splign:2.1.0"
     CDS             166..3249
                     /gene="Elapor2"
                     /gene_synonym="RGD1563349"
                     /note="UPF0577 protein KIAA1324-like homolog"
                     /codon_start=1
                     /product="endosome/lysosome-associated apoptosis and
                     autophagy regulator family member 2"
                     /protein_id="NP_001102815.1"
                     /db_xref="GeneID:502727"
                     /db_xref="RGD:1563349"
                     /translation="MLLLALRRARGRGRGRPAWGPRRARSPPWSPAWICCWALAGCQA
                     VWAGDSSSLGRPLPACQEKDYHFEYTECDSTGSRWRVAIPNSAVDCSGLPDPVRGKEC
                     TFSCASGEYLEMKNQVCSKCVEGTYSLGSGIKFDEWDELPAGFSNVATFMDTVVGPSD
                     SRPDGCNNSSWLPRGNYIESNRDDCTVSLIYAVHLKKSGYVFFEYQYVDNNIFFEFFI
                     QNDQCQEMDATTDKWVKLTDNGEWGSHSVMLKSGTNILYWRTTGILMGSKAVKPVLVK
                     NITIEGVAYTSECFPCKPGTFSNKPGSFNCQMCPRNTYSEKGAKECIRCKEDSQFSEE
                     GASECVDRPPCTTKDYFQIHTPCDEEGKTQIMYKWIEPKICREDLTDAIRLPPSGEKK
                     DCPPCNPGFYNNGSSSCHPCPPGTFSDGTKECKSCPAGTEPALGFEYKWWNVLPTNMK
                     TSCFNVGNSKCDGMNGWEVAGDHIRSGAGGSDNDYLILNLHIPGFKPPTSMTGATGSE
                     LGRITFVFETLCSADCVLYFMVDINRKSTNVVESWGGTKEKQAYTHVIFKNATFTFTW
                     AFQRTNQGQDNRRLINDVVKIYSISATNAVDGVAASCRACALGSEQSGSSCVPCPPGH
                     YIEKETNQCKECPADTYLSIHQVYGKEACIPCGPGSKSTQDHSLCYSDCFFYHEKENQ
                     SLHYDFRNLSSVGSLMNGPSFTSKGTKYFHFFNISLCGHEGRKMALCTNNISDFTVKE
                     MVTGSDDLNLVGAFVCQSTIIPSESKGFRAALSSQSIILADTFLGVTVEASLQNVNIK
                     EDMFPVSPSQVPDVHFFYKSSTATTSCINGRSTAVKMRCNPMRPGAGVISVPSKCPAG
                     TCDGCTFYFLWESAEACPLCTEHDFHEIEGACKRGLQEILYVWNEPKWCIKGIALPEK
                     KLSTCETVDFWLKVGAGVGAFTAVLLVALTCYFWKKNQKLEYKYSKLVMTTNSKECEL
                     PAADSCAIMEGEDNEEDVVYSNKQSLLGKLKSLATKEKDDHFESVQLKSSRCPNI"
     exon            352..472
                     /gene="Elapor2"
                     /gene_synonym="RGD1563349"
                     /inference="alignment:Splign:2.1.0"
     exon            473..668
                     /gene="Elapor2"
                     /gene_synonym="RGD1563349"
                     /inference="alignment:Splign:2.1.0"
     exon            669..816
                     /gene="Elapor2"
                     /gene_synonym="RGD1563349"
                     /inference="alignment:Splign:2.1.0"
     exon            817..903
                     /gene="Elapor2"
                     /gene_synonym="RGD1563349"
                     /inference="alignment:Splign:2.1.0"
     exon            904..1009
                     /gene="Elapor2"
                     /gene_synonym="RGD1563349"
                     /inference="alignment:Splign:2.1.0"
     exon            1010..1162
                     /gene="Elapor2"
                     /gene_synonym="RGD1563349"
                     /inference="alignment:Splign:2.1.0"
     exon            1163..1251
                     /gene="Elapor2"
                     /gene_synonym="RGD1563349"
                     /inference="alignment:Splign:2.1.0"
     exon            1252..1432
                     /gene="Elapor2"
                     /gene_synonym="RGD1563349"
                     /inference="alignment:Splign:2.1.0"
     exon            1433..1561
                     /gene="Elapor2"
                     /gene_synonym="RGD1563349"
                     /inference="alignment:Splign:2.1.0"
     exon            1562..1652
                     /gene="Elapor2"
                     /gene_synonym="RGD1563349"
                     /inference="alignment:Splign:2.1.0"
     exon            1653..1755
                     /gene="Elapor2"
                     /gene_synonym="RGD1563349"
                     /inference="alignment:Splign:2.1.0"
     exon            1756..1893
                     /gene="Elapor2"
                     /gene_synonym="RGD1563349"
                     /inference="alignment:Splign:2.1.0"
     exon            1894..2157
                     /gene="Elapor2"
                     /gene_synonym="RGD1563349"
                     /inference="alignment:Splign:2.1.0"
     exon            2158..2331
                     /gene="Elapor2"
                     /gene_synonym="RGD1563349"
                     /inference="alignment:Splign:2.1.0"
     exon            2332..2518
                     /gene="Elapor2"
                     /gene_synonym="RGD1563349"
                     /inference="alignment:Splign:2.1.0"
     exon            2519..2615
                     /gene="Elapor2"
                     /gene_synonym="RGD1563349"
                     /inference="alignment:Splign:2.1.0"
     exon            2616..2717
                     /gene="Elapor2"
                     /gene_synonym="RGD1563349"
                     /inference="alignment:Splign:2.1.0"
     exon            2718..2844
                     /gene="Elapor2"
                     /gene_synonym="RGD1563349"
                     /inference="alignment:Splign:2.1.0"
     exon            2845..3023
                     /gene="Elapor2"
                     /gene_synonym="RGD1563349"
                     /inference="alignment:Splign:2.1.0"
     exon            3024..3189
                     /gene="Elapor2"
                     /gene_synonym="RGD1563349"
                     /inference="alignment:Splign:2.1.0"
     exon            3190..5912
                     /gene="Elapor2"
                     /gene_synonym="RGD1563349"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tggcgtgacg ggagcacggg cgccggctgc ccgcgccgcg agcggccgag ctgtcagtgg
       61 gaggatcagc ccagttgagc tgagccgaga ggagccaaga ccaccgtcct cgtctcccgg
      121 agccggagcc gctcagcctc cacgccgagt ccacccagcg ccgtgatgct gctgctcgcc
      181 ctgaggcggg cgcggggcag gggccggggg cgaccggcct ggggtccccg ccgcgcgcgc
      241 tcgccgccct ggagccccgc ctggatttgc tgctgggcgc tcgctggctg ccaggcagtc
      301 tgggctgggg actcgtcctc tttgggccgc ccgcttcctg cgtgccagga gaaagattac
      361 cactttgaat atacagaatg tgatagcact ggctccaggt ggagggtcgc cattccgaat
      421 tctgcagtgg attgctctgg cctgcctgac ccagtgagag gcaaagaatg cactttctcc
      481 tgtgcttctg gagagtatct agaaatgaag aaccaggtat gcagtaagtg tgtcgaaggc
      541 acttactccc tgggcagtgg catcaaattt gatgaatggg atgagttgcc ggcaggattt
      601 tccaacgttg caacattcat ggacactgtg gtgggccctt ctgacagcag gccagatggc
      661 tgtaacaact cttcttggct tcctcgtggg aactatatag agtctaaccg tgatgactgc
      721 actgtgtctc tgatctacgc tgtacacctt aagaaatcag gctacgtctt ctttgagtac
      781 cagtatgtgg acaacaacat cttctttgag ttctttattc agaatgacca gtgccaggag
      841 atggatgcca ccacagacaa gtgggtgaag ctcacagaca acggagaatg gggctcccac
      901 tccgtaatgc tgaaatcagg cacaaatatt ctgtactgga ggacgacagg catccttatg
      961 ggttctaagg cagtcaagcc tgtgctagta aaaaatatca ccattgaagg agtggcgtat
     1021 acctcggagt gctttccatg taagccaggc actttcagca acaaaccagg ctcatttaac
     1081 tgccaaatgt gccccaggaa cacctattct gagaagggtg ctaaagaatg catcaggtgt
     1141 aaggaggact cccaattttc agaggaagga gccagtgagt gtgtggatcg tccaccctgc
     1201 actaccaaag actatttcca gatccatact ccctgtgatg aagaagggaa gacacagata
     1261 atgtacaagt ggatagagcc gaaaatctgc agggaagatc tcacagatgc tattaggctg
     1321 cccccttctg gagagaagaa ggattgtccc ccttgcaacc caggattcta taacaatggc
     1381 tcttcttctt gccatccctg ccctcccggg acgttttcgg atggcacaaa ggaatgcaag
     1441 tcgtgtccgg ccggaacaga gccagcactt gggtttgaat ataaatggtg gaatgtcctt
     1501 cccaccaaca tgaaaacttc ctgcttcaat gttgggaatt ccaagtgcga tgggatgaat
     1561 ggttgggagg tggctggaga tcacatccgg agtggagctg gaggctcgga caacgactat
     1621 ctcatcttaa acttgcatat cccgggattt aaaccgccaa catctatgac tggagccaca
     1681 ggttctgaac taggaaggat aacgtttgta tttgagactc tctgctcagc tgactgtgtt
     1741 ctgtacttca tggtggatat aaatagaaaa agtaccaatg tggtggagtc atggggagga
     1801 accaaagaaa agcaagctta tacgcatgtc atattcaaga atgcaacgtt tacatttaca
     1861 tgggcattcc agagaaccaa tcaaggtcaa gacaacagac gtctcatcaa tgatgtggtg
     1921 aagatttatt caatctcagc cacgaatgca gttgatgggg tagcagcatc atgtcgggcc
     1981 tgtgccctgg gttctgagca gtcgggatca tcatgtgtgc cctgcccccc aggccactac
     2041 atcgagaaag aaaccaatca gtgcaaggag tgtccagctg acacctacct gtccatccac
     2101 caggtctatg gcaaggaggc ttgcattcca tgtgggcctg ggagtaaaag cacccaggat
     2161 cactcgcttt gctacagtga ctgctttttc taccatgaaa aagaaaacca gagtctgcac
     2221 tatgacttcc gcaacctcag cagtgtgggc tctctaatga atggccccag cttcacctcc
     2281 aagggaacca aatacttcca tttcttcaat atcagtttat gcgggcatga ggggagaaag
     2341 atggctctct gcaccaacaa tatttcagat tttacagtaa aggagatggt gacagggtca
     2401 gatgatttga atttggttgg agcatttgtg tgccagtcaa ctattattcc ttcagaaagt
     2461 aagggcttcc gggcagccct gtcatcccag tcgatcattc tggcagatac atttttagga
     2521 gtcacagtgg aagcttcctt gcaaaacgtt aatatcaagg aggatatgtt cccagtgtca
     2581 cccagccaag ttccagatgt gcatttcttc tataagtctt ccacagccac cacgtcttgt
     2641 attaatggcc gatcgactgc tgtgaaaatg cgatgtaatc ccatgagacc tggtgcaggt
     2701 gtgatatcgg tccccagcaa gtgtccagct ggcacctgcg atggttgtac attctacttc
     2761 ctatgggaga gtgcggaagc ttgccctcta tgcacagagc atgacttcca tgagatcgag
     2821 ggagcctgca agagagggct tcaggaaatc ttatatgtat ggaatgagcc taagtggtgc
     2881 attaaaggaa ttgctttgcc cgagaagaaa ttgtcaacgt gtgaaacagt tgacttttgg
     2941 ctgaaagtgg gagctggtgt tggggcattc acagctgttt tgttggtggc tttaacgtgc
     3001 tacttttgga aaaagaatca aaagctggaa tacaaatatt ctaaattagt aatgacgact
     3061 aactccaaag agtgtgaact cccagctgca gacagctgtg ctatcatgga aggagaagat
     3121 aatgaagagg atgttgtata ttccaacaag cagtcactac tagggaagct taagtctttg
     3181 gccacaaagg aaaaagacga ccactttgaa tctgttcagc tgaaatcctc aagatgcccc
     3241 aatatatgaa gagacaatgc tgtagcattc aggaccccca ttaggacttg tcctcacacc
     3301 tgacatggct gtgatctcac cgaggtggtg tgccagcgag aggagtaggc aaaactgctg
     3361 attgccttat aacacgtcac atactttgtc aaactacaga agacagatga tgtgggtctc
     3421 actgaagatg aagcttaact caggaagcga tttagctgta tatactcatg actgaaatcc
     3481 aagttttagc ccaccaatgc actgctgatg catgccatac tattactggg taactttaat
     3541 tctttatacc gtctacatac aaaatatgtg ttggaaggca gacataagca tacgccttgt
     3601 gtttccacat atgtcttgtt cttgtacttt ggggaagatt tgggggaaaa attaagttat
     3661 aattattttt gcctttattt ctccaagact tgaaaacatc ttttttttaa aattgaaatg
     3721 atgagcaaaa tgaaagacaa taaattttca tagggtattt tctcttgact tcagaaagac
     3781 taggatatta gtaatatttt gtgaagttac ttacttgggt tatctaaggt ggtaatcact
     3841 tttaaaaact tctttccttg ttggaactag tatgaaaaaa tttaagtaat tgcttgaagt
     3901 catctcatgg gatggggtgg gaggcaataa aagccaagaa gaaagctcaa tattccattc
     3961 attcaaacaa actggcttta tcaggagtca gaggcttaaa gcacttgagt gtcaatatag
     4021 actaaagctt gggtagtacc ctattttgca gacccctgca cagtcataag aaaggagagg
     4081 gagtgcttga ccctaagcac agaaagctct acttgtccgg gtaaccgaag gtcataccaa
     4141 gtgtcagctg ggctttccct cgacatcagg caccacccag agtgctagag gtgtctattt
     4201 ttcccttgct agaagacttt gaggattata aatatcttga agattttatt tttaagccaa
     4261 taagggagaa attcaatttt tgaagtgcgg atacctgtat tcacagtcag atccttctga
     4321 gcaatgtgtc gttcctgttc gaaagcaacc cagaaacttg tgacatttct cacagtggat
     4381 tatgagtatc attgtgactt ggatattact tttgaaggaa gtttggtgat gaatttgatc
     4441 aagtttgtgt aaacttttta gacctgggaa ttagagtgtc ttacccattc ctgatataag
     4501 atgttttggt ttgtttctaa taaaccaata atctttacag accttaacca catacttaaa
     4561 aagatttttg atgggctgca gcgggcaaag catacgggta aggtttccac catgtgtttt
     4621 gcctgaggtg tttcagtgct tgtaatgttt gatttttgtg ggtgatgtag tctttatttt
     4681 tgtgaaaaat gggagaaaat gaataaatga ataattgtgc ttattggcca gtgggtaaac
     4741 cactagacct ttttgctacc actaaaagaa tggttgtatg tgtgtgtttt gtgtgtgtgt
     4801 gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt atgtacatgt gtatatgtat gtgtgtatgt
     4861 atgtatctac tactaaatat gaaaataggt gatgtattat tgtttgtcgt aagactgaaa
     4921 agaatgttac ttagcataat tttgtattta atttcttgaa tatcctaaat tattttagct
     4981 ttgctcattt ttgtctcaat atcagaatat tggcatgcct ttccctatca taatcaaaat
     5041 ttaaccagaa gagtgggaat acacttgaac taccacttag aggaacaggt ggaaacgtag
     5101 actggacaga gtcagaaagc atcttctgtc acctgtcacc cctcttcacc ctctgctgtg
     5161 ctcaacatgt atgttccaag ccatagaaat aattgggatt tgttcccagg ttcttcttct
     5221 ttctcttgtc actggactaa aatctctgac atgtcaaaaa tgccttaaat tttaatgaac
     5281 tctctgaaaa tgcagtagat attgaagaag ttattttatt tctaatttta gatattaaat
     5341 agattttttt ttgtcagctc ggtcccatct ttggattccc atggctcgtc attttattct
     5401 aagagctgaa gaactatgac agaacattat gaggagaata tgcagaacaa ttctagctgt
     5461 aaaattctgt ttagttttat gtatggcctt tgacaagccc agtgaaatgt tgaaagctat
     5521 aatcaaatca ttccgctttt atgatttatt gacatgtcct ctccccatca ctactagtga
     5581 tagaaaaata cattatttat tacttttctt ctaaaaggca tacttttgag ccttaaatag
     5641 ttcattaagt catctgttgt gtataacatc tcttagcact gtgtcaaaac atatttaagt
     5701 caattttcta ctggatgaga acatgtcgtc tatggataag ttatattatg ctatttgcca
     5761 atgtcaagca atttggtata tagtcacttg atttaaaata ctgaatttta ttattattga
     5821 cctttcccgt ctttggttac taataatcat atccttctta ggattaaaca tatttcattg
     5881 tacttttgtg tagacttctg tcattatttt tc
//
