LOCUS       XM_039085462            1135 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus eukaryotic translation initiation
            factor 5A (Eif5a), transcript variant X5, mRNA.
ACCESSION   XM_039085462
VERSION     XM_039085462.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1135
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1135
                     /gene="Eif5a"
                     /note="eukaryotic translation initiation factor 5A;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 3 mRNAs, 94 ESTs, 89 long SRA reads, 16
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 124 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:287444"
                     /db_xref="RGD:1308029"
     CDS             41..505
                     /gene="Eif5a"
                     /codon_start=1
                     /product="eukaryotic translation initiation factor 5A-1
                     isoform X1"
                     /protein_id="XP_038941390.1"
                     /db_xref="GeneID:287444"
                     /db_xref="RGD:1308029"
                     /translation="MADDLDFETGDAGASATFPMQCSALRKNGFVVLKGRPCKIVEMS
                     TSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGIQDGYLSLL
                     QDSGEVREDLRLPEGDLGKEIEQKYDCGEEILITVLSAMTEEAAVAIKAMAK"
ORIGIN      
        1 tgggggaggg ggctgttcgt tggaatcgaa gcctcttaaa atggcagatg atttggactt
       61 cgagacagga gatgcagggg cctcagccac cttcccaatg cagtgctcag cattacgtaa
      121 gaatggtttt gtggtgctca agggccggcc atgtaagatc gtcgagatgt ctacttcgaa
      181 gactggcaag catggccatg ccaaggtcca tctggttggt attgatattt ttactgggaa
      241 gaaatatgaa gatatctgcc cgtcgactca taacatggat gtccccaaca tcaaaaggaa
      301 tgatttccag ctgattggca tccaggatgg gtacctatcc ctgctccagg acagtgggga
      361 ggtacgagag gaccttcgtc tgcctgaggg agaccttggc aaggagattg agcagaagta
      421 tgactgtgga gaagagatcc tgatcacagt gctgtccgcc atgacagagg aggcagctgt
      481 tgcaatcaag gccatggcaa aataactggc ttccagggtg gcggtggtgg cagcagtgat
      541 ccatgagcct acagaggccc ctcccccagc tctggctggg cccttggctg gactcctatc
      601 caatttattt gacgttttat tttggttttc ctcacccctt caaactgtcg gggagaccct
      661 gcccttcacc tagctccctt ggccaggcat gagggagcca tggccttggt gaagctacct
      721 gcctcttctc tcgcagccct gatgggggaa agggagtggg tactgcctgt ggtttaggtt
      781 cccctctccc tttttctttt taattcaatt tggaatcaga aagctgtgga ttctggcaaa
      841 tggtcttgtg tcctttatcc cactcaaacc catctggtcc cctgttctcc atagtccttc
      901 acccccaagc accactgtac agactgggga ccagccccct tccctgcctg tgtctcttcc
      961 caaacccctc tataggggtg acaagaagag gggggggagg ggacacgatc cctcctcagg
     1021 catctgggaa ggccttgccc ccatgggctt taccctttcc tgtgggcttt ctccctgaca
     1081 catttgttaa aaatcaaacc tgaataaaac tacaagttta atatgaagcc cccaa
//
