LOCUS       XM_039096186            2953 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus eukaryotic translation initiation
            factor 4E family member 1B (Eif4e1b), transcript variant X1, mRNA.
ACCESSION   XM_039096186
VERSION     XM_039096186.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051352.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039096186.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2953
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2953
                     /gene="Eif4e1b"
                     /note="eukaryotic translation initiation factor 4E family
                     member 1B; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 4 ESTs, 9 Proteins, and 99%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 3 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:686104"
                     /db_xref="RGD:1585494"
     CDS             1270..2061
                     /gene="Eif4e1b"
                     /codon_start=1
                     /product="eukaryotic translation initiation factor 4E type
                     1B"
                     /protein_id="XP_038952114.1"
                     /db_xref="GeneID:686104"
                     /db_xref="RGD:1585494"
                     /translation="MSKAEGEGQEEEEEEEEEEEKEEEEEEEEEEKEEEEEEEVKEKP
                     SEATAEGLQGEARDLPGSLKTVKQKAQREHPTKLPRELHPLQFRWVLWFFKNDRSRAW
                     QDNLQLVTKFDTVEDFWATYRHVKLASKLSCGCDYALFKEGIQPMWEDSRNKRGGRWL
                     LSLAKQQRHMELDRLWLETLLCLLGESFEEYSGEVCGAVVNIRTKGDKIALWTSEAEN
                     KAGVMHIGHIYKERLGLSTKTIIGYQAHADTAAKSNSLAKNKFVV"
ORIGIN      
        1 cacacacaca cacacacact gggtgtaata aaaccaggac agacagggct ggtgaccaaa
       61 tgggaaaggt ctgcataaac caagggtatt caaacttaga aaattatatc gtgctggtaa
      121 gttaaccgta tctaagccaa aattcagccg gagggccatg cacctgtaat ccagaagaca
      181 gcgggttgta ggtagtgtgg taattgggct tctatcactc ccactcatct aagcccaccg
      241 gtttgtttca cagggtcatc tgttagctac tttctgcttc cagatatgaa ggcccaggtg
      301 accagaacac actggtctcc cgttgggtta atggcttccc cagatttgcc atcttccctc
      361 catcggtgac tgaatagagt gagcagattc aacacgacgt tgaggggact tctctgcagg
      421 aaaccagact atagttcttg cgcagcgaac gcagacctga ctgggtttct actgcaattg
      481 gaaacgccgc acagactagg gcggagcctg tccgaataaa agcgttttcc tactcgcaga
      541 ggcggagcct ccacgcgttg cagattttat caaggtttcc ttcttactct gagtcggcgg
      601 gggcccccta gtgctgatcg tggtgtggtc ccggcgtctg gcgcgcttcc cagtattctg
      661 cagaccctct cctactccag ctgaaatctc aaactttcag tgagtggaga gtaccgcctg
      721 gcgggagctc tgccctctcc tgggccaatg cttcattctg ttttgtttgc gttgggcggg
      781 tgtgcctaaa tgtgtgtgga caggactgga gtgggagggg tctgccaacg gttaacgacg
      841 tctttccgcc gctcgtctac aaccgggcca aagagcgcgg gtctgcatgt gagctctggc
      901 cttggtgctg aaacccgggc tcgcgcgtag agactggcgc acgttcacgc gcgtgcatgc
      961 gcattcacga tgctggtgcg gcccttgctt cttttggtct tgtactcctc cctttcctgc
     1021 caggaggtgg cgcctgatgc taacttcccg cctcccagtc aacttcaatc tcagtgtgca
     1081 aactgccaga ctgactatag gacccaggag agaactctgg aagcttccct ccagggcaga
     1141 agggaactgg aggctcaggg aacatggagt ctatagacac ctccttacag cttcattctt
     1201 agtcgagtgc acacagactt gaaggaaggg aagcaagcaa actttgtgcc ccgggctgga
     1261 ggagtggaga tgagcaaagc tgagggtgaa gggcaggagg aggaagagga ggaagaagag
     1321 gaagaggaga aggaagagga ggaggaagaa gaggaagagg agaaggaaga ggaagaggag
     1381 gaggaggtga aagaaaagcc atcagaagca acagcggagg gactccaagg agaagccaga
     1441 gacctacctg gatcccttaa gaccgtgaag cagaaggccc agagagaaca tccaaccaag
     1501 ctcccgaggg agctgcaccc cctgcagttc aggtgggttc tgtggttctt caagaatgat
     1561 cgaagccggg cctggcagga caatctgcag ttagtcacca agtttgacac tgtggaggac
     1621 ttctgggcga cgtaccgcca cgtcaagctg gccagtaagc tctcttgtgg ctgtgactac
     1681 gctctgttca aggaaggcat ccaacccatg tgggaagaca gcagaaacaa gcggggtggc
     1741 cgctggctgc tcagtcttgc caaacagcag cgccacatgg aactggaccg tctgtggctg
     1801 gagacattgc tgtgtctact cggggagagt tttgaggagt acagcgggga agtgtgtggc
     1861 gccgtcgtca acatccgcac caagggggac aagattgccc tgtggacaag tgaagcagag
     1921 aacaaggccg gtgtgatgca catcgggcat atatacaaag agcgcctggg cctctccacg
     1981 aagaccatca ttgggtacca ggcccatgca gacactgcgg ctaagagcaa ctctttagcc
     2041 aagaacaagt ttgtggtgtg aggcaggctt ccggccgcta ctcacctggg caccctcctt
     2101 ctcctgttgg tggaccggaa gactgcactg tggattctgg ggcagggctt gggggatgga
     2161 cggcctggtt ccttacctct cttggaaggc gtgtagtgta aacgacactc cttggatgtt
     2221 gctgacgttg gcctcatatt taccggttta agccattctc ccgcttcagc ctacataact
     2281 gggattgtaa gagttcacaa ttgtacccgt gtttataata atttcttcag cttttgcggg
     2341 tggggtgggg cggggctcgg gccttgtggc agctggccac tacttataaa ctagtctcaa
     2401 ttcgccattt gccaaaagca gggtgaagtg atgtcctggc tttggagttc agttctccgt
     2461 gggcactgct taaaggcttt ttataggttg ccttcattag atccgtagct tgggtaccca
     2521 tcctaaaacc tgccccttcc ctagaccagc tgtgattggc tcctaccctc tctccctccc
     2581 tcccctcaag tactggagta ggttagagga aaaacaattt gtgtaaagac aggtgggccc
     2641 tgggaactga gaaatgccct gcatacttct cctctgaaga cggtcctgta ggtcctgtgt
     2701 gtctcctgct gaagtgatgg aatggaagaa ccttaatgcc tgaagagatt gcagtggtag
     2761 ttgggtgttg ttgtaaaata taaaaaaaat aaaaaaaagt attgtctaac tcgtttaggt
     2821 ccgcaccaca gtgccctaag atatctgcta gatatctctg tggaaacaca tcccaactcc
     2881 gcggtggccc cagtgtctcc agctgccaca ccttttccta cactcaaacc atcacataaa
     2941 tgaacacgta aca
//
