LOCUS       XM_017590592            3139 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus eukaryotic translation initiation
            factor 4E (Eif4e), transcript variant X2, mRNA.
ACCESSION   XM_017590592
VERSION     XM_017590592.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017590592.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017590592.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3139
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3139
                     /gene="Eif4e"
                     /note="eukaryotic translation initiation factor 4E;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 mRNAs, 73 ESTs, 6 long SRA reads, 1
                     Protein, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 149 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:117045"
                     /db_xref="RGD:69647"
     CDS             879..1436
                     /gene="Eif4e"
                     /codon_start=1
                     /product="eukaryotic translation initiation factor 4E
                     isoform X2"
                     /protein_id="XP_017446081.1"
                     /db_xref="GeneID:117045"
                     /db_xref="RGD:69647"
                     /translation="MATVEPETTPTTNPPPAEEEKTESNQEVANPEHYIKHPLQNSLY
                     NHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETL
                     LCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENRDAVTHIGRVYKERLGLPPK
                     IVIGYQSHADTATKSGSTTKNRFVV"
ORIGIN      
        1 ctgaccctca gtccagggct gagtcagcgg agcccggagt ggcttccctg gctggcacct
       61 ggacgtaggc tatttccgtt cacgtccaag cagaatactg gaaccgattg gacagaactt
      121 tccaaacttt ttacgtccag caagattcac ccctgacgcc ttcatctcag gactgggaac
      181 aggaaaagcc gacgcgtgca ctccccttcc ccaagcgtgt gagtgggtac cgtgggcaag
      241 cccgcccacc cgcttgggca gcgatggcag caagggacca cccgcgttag tggaccgggg
      301 acgggggaac gcagacctca tcaacgactc tccatcgccg cctctttctg aaaccaagag
      361 aaaatggtgg gaggcgaaaa gaaaactaaa taaaaacaca agcaacttgt cttaggacct
      421 cagctaagca aatgaagcct tcttgcgtgt gctgagcctg cagttctcaa ccttctagga
      481 aagatgggag gactgggcga cagagggcac agcaggaatg cccagcagtg agagcaaccg
      541 gagctctgcc cgctgcaccg cagaggccta aaacctactc tgcaggaagt gcgggcggcg
      601 ctgggagccg cgcaccctcg ccagcgacca cgtgatcact tttttttttt tttgggagaa
      661 aaaacttcct tgccttaaga gaaaaaaaaa aaaaaaaaaa gagactccac ttcccagaag
      721 cctcttgttc cccaagcagc tgcagtcttg cgcaggcgcc gccagggcca aacggacacg
      781 tccgtcacgt gggcaggagc cggccaatcc ggtttgaatc tcattttttt cctctcgccc
      841 ccccttcagg agcggttgtg cgatcagatc gatctaagat ggcgactgtg gaaccggaaa
      901 ccacccctac cactaatccc ccacctgcgg aagaggaaaa aacagagtct aatcaggagg
      961 ttgctaatcc agagcactat attaaacacc ctctacagaa cagtctatac aaccatatcc
     1021 agttgtctag taatttaatg cctggctgtg actactcact ttttaaggat ggtattgagc
     1081 ctatgtggga agatgagaaa aacaaacggg gaggacgatg gctaattaca ttgaacaagc
     1141 agcagagacg aagtgacctc gatcgctttt ggctagagac actgctgtgc cttattggag
     1201 aatcttttga tgactacagt gatgacgtgt gtggagctgt tgtcaatgtt agagctaaag
     1261 gtgataagat agcaatatgg acgactgaat gtgaaaacag agatgcagtc acacacatag
     1321 ggagggtata caaggaaagg ttaggacttc ctccgaagat agtgattggt tatcagtccc
     1381 acgcagacac agctacaaag agcggctcca ccactaaaaa taggtttgtt gtttaagaag
     1441 acaccttctg agtatcctca caggagactg cgtcacgcaa tcgagattgg gagctgaacc
     1501 aaagcctcat caaagcagag tggactgcac tgaagctgac tccatccaag tgttgctaag
     1561 atataagaga agtctcattc gcctttgtct tgtacttctg tgttcattct cctcccccac
     1621 cccaattttt gctagtgtgt ccaccatccc aatcaaagaa ttacagtata cgtcacccca
     1681 gaacccacag atgtgttcct ggcccgctct gtaacagccg ggtagagtta ccacgacaca
     1741 cacttgcctt tccacagtat tcgaaaaaga acgtgcattt ctgtcacctt agcaggaaaa
     1801 gatctggttt tgttccactc catgcaggag cggatttgct ggtgtgagag tctaagtaca
     1861 gctttctagc aaccttctgt tttctgtcac agcattgtcc ttgctgtcct cttgctgatg
     1921 gctgctagat gttaatttat ttgcttccct ccttgataac attagtgatt ctgatttcag
     1981 tttttcattt gttttgcttt tgtttttttc ctcatgtaac attggtgaag gatccaggac
     2041 tatgacagaa aggtggaata aacattacat ttgtgcattc tttggtaatt tttttgtttt
     2101 ttgtaactac aaagctttgc tacaaattta tgcatttcat tcaaatcagt gatctatgtc
     2161 tgtgtgatcc ctaaacataa ttgtggacta taaaaatgta acaccataat tacattccta
     2221 actagaatta gttgtctgct tttgtatctt tatgctgtac tttaacactt tgtattactt
     2281 aggttatttt gctttggtta caatggctca agtagaaaag cggtcccatc catattaaga
     2341 cagtgtacaa aactgtaaat aaaatgtgta cagtgaattg tcttttagac aactagattt
     2401 gtccttttat ttctccatct ctagaaggaa tctgtactcc atattgcaag gcagtctctt
     2461 gtgtcttctt agtgtcttcc ccatgcacag cctaagtttg gagcactagt ttattattat
     2521 gtttattaca atttttaata aattgaatag gtagtatcac atgtaattaa actgatgtgg
     2581 ctatcttttt tgataaagtt aagacacagt ttttcagtct taggttaata atgtacttag
     2641 aatatgttaa aattcatgag aattgggatt ttggtgtatc accatttgat aggaacagtg
     2701 gctataaact gagtgttgag tttaagatgt ttttacttaa tggccagaaa attagaataa
     2761 ggaaggttag gggaatgtgc attaggaaca ttagtgttac tatctgaata aaacataata
     2821 aacaagtatt aagaactatt tatattggtc agttgttgca gtatggttct ctgtaaactt
     2881 gaaaccttga tctattcctt gtatcattta aagcaaacat gaagacattt tgtctgcact
     2941 acataactgt gtattgtttg gatctagtga aatgaggtgt ggctgtcaca gaccaaaggg
     3001 taagctgaac tgtgggtggc agagtggaga ccgctggtga gagaagaatg ctctgtaagt
     3061 ggttattatt atgagttcat ccttttcaca ctggtaactt gataaagatc cttataaaat
     3121 aaatatggaa ttaatagca
//
