LOCUS       NM_001398703             754 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus eukaryotic translation initiation factor 3,
            subunit K (Eif3k), mRNA.
ACCESSION   NM_001398703 XM_006228715
VERSION     NM_001398703.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 754)
  AUTHORS   Lee,A.S., Kranzusch,P.J. and Cate,J.H.
  TITLE     eIF3 targets cell-proliferation messenger RNAs for translational
            activation or repression
  JOURNAL   Nature 522 (7554), 111-114 (2015)
   PUBMED   25849773
REFERENCE   2  (bases 1 to 754)
  AUTHORS   Hinnebusch,A.G.
  TITLE     The scanning mechanism of eukaryotic translation initiation
  JOURNAL   Annu Rev Biochem 83, 779-812 (2014)
   PUBMED   24499181
  REMARK    Review article
REFERENCE   3  (bases 1 to 754)
  AUTHORS   Ghosh,D., Lippert,D., Krokhin,O., Cortens,J.P. and Wilkins,J.A.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
REFERENCE   4  (bases 1 to 754)
  AUTHORS   Zhou,M., Sandercock,A.M., Fraser,C.S., Ridlova,G., Stephens,E.,
            Schenauer,M.R., Yokoi-Fong,T., Barsky,D., Leary,J.A., Hershey,J.W.,
            Doudna,J.A. and Robinson,C.V.
  TITLE     Mass spectrometry reveals modularity and a complete subunit
            interaction map of the eukaryotic translation factor eIF3
  JOURNAL   Proc Natl Acad Sci U S A 105 (47), 18139-18144 (2008)
   PUBMED   18599441
REFERENCE   5  (bases 1 to 754)
  AUTHORS   Masutani,M., Sonenberg,N., Yokoyama,S. and Imataka,H.
  TITLE     Reconstitution reveals the functional core of mammalian eIF3
  JOURNAL   EMBO J 26 (14), 3373-3383 (2007)
   PUBMED   17581632
REFERENCE   6  (bases 1 to 754)
  AUTHORS   Damoc,E., Fraser,C.S., Zhou,M., Videler,H., Mayeur,G.L.,
            Hershey,J.W., Doudna,J.A., Robinson,C.V. and Leary,J.A.
  TITLE     Structural characterization of the human eukaryotic initiation
            factor 3 protein complex by mass spectrometry
  JOURNAL   Mol Cell Proteomics 6 (7), 1135-1146 (2007)
   PUBMED   17322308
REFERENCE   7  (bases 1 to 754)
  AUTHORS   De Martelaere,K., Lintermans,B., Haegeman,G. and Vanhoenacker,P.
  TITLE     Novel interaction between the human 5-HT7 receptor isoforms and
            PLAC-24/eIF3k
  JOURNAL   Cell Signal 19 (2), 278-288 (2007)
   PUBMED   16935469
  REMARK    GeneRIF: These observations suggest that PLAC-24 may play a role in
            the transport and the stabilisation of newly synthesised 5-HT(7)
            receptor towards the plasma membrane.
REFERENCE   8  (bases 1 to 754)
  AUTHORS   Karki,S., Ligon,L.A., DeSantis,J., Tokito,M. and Holzbaur,E.L.
  TITLE     PLAC-24 is a cytoplasmic dynein-binding protein that is recruited
            to sites of cell-cell contact
  JOURNAL   Mol Biol Cell 13 (5), 1722-1734 (2002)
   PUBMED   12006665
  REMARK    GeneRIF: identification of a novel 24-kDa protein (Plac-24) that
            binds directly to dynein intermediate chain.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Dec 21, 2021 this sequence version replaced XM_006228715.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BI283109.1, CB328341.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840115, SAMN16676785
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-125               JAXUCZ010000001.1  93397363-93397487   c
            126-224             JAXUCZ010000001.1  93396333-93396431   c
            225-345             JAXUCZ010000001.1  93393950-93394070   c
            346-420             JAXUCZ010000001.1  93393308-93393382   c
            421-487             JAXUCZ010000001.1  93390881-93390947   c
            488-565             JAXUCZ010000001.1  93390448-93390525   c
            566-691             JAXUCZ010000001.1  93389019-93389144   c
            692-754             JAXUCZ010000001.1  93387628-93387690   c
FEATURES             Location/Qualifiers
     source          1..754
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q21"
     gene            1..754
                     /gene="Eif3k"
                     /gene_synonym="Eif3s12; PLAC-24"
                     /note="eukaryotic translation initiation factor 3, subunit
                     K"
                     /db_xref="GeneID:292762"
                     /db_xref="RGD:1309221"
     exon            1..125
                     /gene="Eif3k"
                     /gene_synonym="Eif3s12; PLAC-24"
                     /inference="alignment:Splign:2.1.0"
     CDS             67..723
                     /gene="Eif3k"
                     /gene_synonym="Eif3s12; PLAC-24"
                     /note="eukaryotic translation initiation factor 3, subunit
                     12"
                     /codon_start=1
                     /product="eukaryotic translation initiation factor 3
                     subunit K"
                     /protein_id="NP_001385632.1"
                     /db_xref="GeneID:292762"
                     /db_xref="RGD:1309221"
                     /translation="MAMFEQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDL
                     EANLAVLKLYQFNPAFFQTTVTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQI
                     LYLGDLLETCHFQAFWQALDENMDLLEGITGFEDSVRKFICHVVGITYQHIDRWLLAE
                     MLGDLTDNQLRVWMSKYGWSADESGQVFICSQEESIKPKNIVEKIDFDSVSSIMASSQ
                     "
     exon            126..224
                     /gene="Eif3k"
                     /gene_synonym="Eif3s12; PLAC-24"
                     /inference="alignment:Splign:2.1.0"
     exon            225..345
                     /gene="Eif3k"
                     /gene_synonym="Eif3s12; PLAC-24"
                     /inference="alignment:Splign:2.1.0"
     exon            346..420
                     /gene="Eif3k"
                     /gene_synonym="Eif3s12; PLAC-24"
                     /inference="alignment:Splign:2.1.0"
     exon            421..487
                     /gene="Eif3k"
                     /gene_synonym="Eif3s12; PLAC-24"
                     /inference="alignment:Splign:2.1.0"
     exon            488..565
                     /gene="Eif3k"
                     /gene_synonym="Eif3s12; PLAC-24"
                     /inference="alignment:Splign:2.1.0"
     exon            566..691
                     /gene="Eif3k"
                     /gene_synonym="Eif3s12; PLAC-24"
                     /inference="alignment:Splign:2.1.0"
     exon            692..754
                     /gene="Eif3k"
                     /gene_synonym="Eif3s12; PLAC-24"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccttgagtac ttagtaccgt aactggtgtt cgactccagc tggggctgca gaaggcgaca
       61 gtggtcatgg cgatgtttga gcagatgaga gcaaacgtgg gcaagttgct caagggtatc
      121 gacaggtaca atcccgagaa cttggctacc ttggagcggt atgtggagac acaggccaag
      181 gagaatgcct atgatctaga agccaacctg gccgtcctga aactgtacca gttcaaccca
      241 gccttcttcc agaccacagt cactgcccag attctgctga aagccctcac caacctgccc
      301 cacaccgact tcactctgtg taaatgtatg atcgaccagg cacatcaaga agagcggccc
      361 atccgacaga tcttgtacct cggggacctg ctggagacct gccactttca agccttctgg
      421 caagccctgg atgagaacat ggacctcctg gaaggcataa ctggctttga agactctgtc
      481 cgaaaattta tctgccatgt cgtgggcatc acctaccagc acatcgaccg ctggctgctg
      541 gccgagatgc tcggagacct gactgacaac cagctgaggg tgtggatgag caagtacggc
      601 tggagcgcgg acgagtcagg gcaggtcttc atctgcagcc aggaggagag cattaagccc
      661 aagaacatcg tggagaagat cgactttgac agtgtgtcca gcatcatggc ctcgtcccag
      721 taactgtgtg cattaataaa gatggtccac tcca
//
